version 1.0
Acidovorax sp. JS42, complete genome - 1..4448856 4007 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 844 72.53 +1 905890..906639 - 249 121593280 - Ajs_0858 - glycerophosphodiester phosphodiesterase 845 67.86 0 906665..907672 - 335 121593281 - Ajs_0859 - ABC transporter related 846 64.31 0 907736..908584 - 282 121593282 - Ajs_0860 - binding-protein-dependent transport systems inner membrane component 847 62.02 0 908587..909468 - 293 121593283 - Ajs_0861 - binding-protein-dependent transport systems inner membrane component 848 63.17 0 909599..910912 - 437 121593284 - Ajs_0862 - extracellular solute-binding protein 849 66.21 0 911149..912453 + 434 121593285 - Ajs_0863 - D-3-phosphoglycerate dehydrogenase 850 67.33 0 912646..916569 + 1307 121593286 - Ajs_0864 - FAD linked oxidase domain-containing protein 851 71.14 0 916566..917057 + 163 121593287 - Ajs_0865 - histidine triad (HIT) protein 852 68.35 0 917221..917637 + 138 121593288 - Ajs_0866 - hypothetical protein 853 63.39 0 917762..918493 + 243 121593289 - Ajs_0867 - ubiquinone/menaquinone biosynthesis methyltransferases 854 70.04 0 918532..919539 + 335 121593290 - Ajs_0868 - import inner membrane translocase, subunit Tim44 855 70.64 0 919620..920198 + 192 121593291 - Ajs_0869 - hypothetical protein 856 64.94 0 920195..921760 + 521 121593292 ubiB Ajs_0870 - putative ubiquinone biosynthesis protein UbiB 857 63.42 0 921799..923247 + 482 121593293 - Ajs_0871 - Na+/solute symporter 858 57.86 -1 923278..923595 + 105 121593294 - Ajs_0872 - FmdB family regulatory protein 859 64.58 0 923611..924234 + 207 121593295 - Ajs_0873 - hypothetical protein 860 64.29 0 924327..926138 + 603 121593296 - Ajs_0874 - aspartyl-tRNA synthetase 861 68.66 0 926235..927038 + 267 121593297 - Ajs_0875 - hypothetical protein 862 66.45 0 927049..927519 + 156 121593298 - Ajs_0876 - NUDIX hydrolase 863 67.19 0 927516..928283 + 255 121593299 - Ajs_0877 - endonuclease/exonuclease/phosphatase 864 72.28 +1 928288..929517 + 409 121593300 - Ajs_0878 - phospholipase D/transphosphatidylase 865 65.56 0 929645..930370 + 241 121593301 - Ajs_0879 - GTP cyclohydrolase 866 65.25 0 930374..930796 + 140 121593302 - Ajs_0880 - BLUF domain-containing protein 867 72.04 +1 931017..931928 + 303 121593303 - Ajs_0881 - hypothetical protein 868 73.87 +1 931990..932808 + 272 121593304 - Ajs_0882 - hypothetical protein 869 72.93 +1 932798..933484 - 228 121593305 - Ajs_0883 - hypothetical protein 870 69.77 0 933560..934171 - 203 121593306 - Ajs_0884 - hypothetical protein 871 71.84 +1 934301..934957 + 218 121593307 - Ajs_0885 - lysine exporter protein LysE/YggA 872 73.86 +1 935024..936427 - 467 121593308 - Ajs_0886 - amidase 873 68.01 0 936531..938021 - 496 121593309 - Ajs_0887 - extracellular solute-binding protein 874 71.10 0 938120..938977 - 285 121593310 - Ajs_0888 - ABC transporter related 875 72.04 +1 938974..939978 - 334 121593311 - Ajs_0889 - oligopeptide/dipeptide ABC transporter, ATPase subunit 876 71.69 +1 939975..940850 - 291 121593312 - Ajs_0890 - binding-protein-dependent transport systems inner membrane component 877 70.03 0 940847..941857 - 336 121593313 - Ajs_0891 - binding-protein-dependent transport systems inner membrane component 878 61.24 -1 941985..942242 + 85 121593314 - Ajs_0892 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 879 67.77 0 942306..942941 - 211 121593315 - Ajs_0893 - peptidyl-tRNA hydrolase 880 63.32 0 943076..943702 - 208 121593316 - Ajs_0894 - 50S ribosomal protein L25P 881 61.80 0 943856..944821 - 321 121593317 - Ajs_0895 - Fis family transcriptional regulator 882 56.69 -2 944987..945838 - 283 121593318 - Ajs_0896 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 883 67.05 0 945848..946363 - 171 121593319 - Ajs_0897 - putative lipoprotein 884 65.61 0 946360..948159 - 599 121593320 - Ajs_0898 - TPR repeat-containing protein 885 69.36 0 948189..949004 + 271 121593321 - Ajs_0899 - formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase 886 66.62 0 949098..951080 + 660 121593322 - Ajs_0900 - hypothetical protein 887 71.14 0 951077..952150 + 357 121593323 - Ajs_0901 - A/G-specific DNA-adenine glycosylase 888 66.78 0 952261..953124 - 287 121593324 - Ajs_0902 - hypothetical protein 889 69.73 0 953128..954792 - 554 121593325 - Ajs_0903 - DNA repair protein RecN 890 66.78 0 954795..955691 - 298 121593326 ppnK Ajs_0904 - inorganic polyphosphate/ATP-NAD kinase 891 62.19 0 955720..956724 + 334 121593327 hrcA Ajs_0905 - heat-inducible transcription repressor 892 63.58 0 957985..958308 + 107 121593328 - Ajs_0906 - transposase IS3/IS911 family protein 893 63.93 0 958305..959219 + 304 121593329 - Ajs_0907 - integrase catalytic subunit 894 56.93 -2 959306..960250 + 314 121593330 - Ajs_0908 - hypothetical protein 895 61.39 -1 960160..961239 - 359 121593331 - Ajs_0909 - integrase catalytic subunit 896 60.42 -1 961319..961702 + 127 121593332 - Ajs_0910 - hypothetical protein 897 66.33 0 961715..962617 - 300 121593333 - Ajs_0911 - hypothetical protein 898 63.46 0 962614..963237 - 207 121593334 - Ajs_0912 - hypothetical protein 899 62.10 0 963938..965164 + 408 121593335 - Ajs_0914 - transposase, mutator type 900 59.20 -1 966008..966529 + 173 121593336 - Ajs_0916 - hypothetical protein 901 63.05 0 966891..967499 + 202 121593337 - Ajs_0917 - hypothetical protein 902 66.50 0 967509..968093 + 194 121593338 - Ajs_0918 - isochorismatase hydrolase 903 64.96 0 968112..968579 + 155 121593339 - Ajs_0919 - hypothetical protein 904 68.17 0 968674..969006 + 110 121593340 - Ajs_0920 - hypothetical protein 905 68.84 0 969087..970331 - 414 121593341 - Ajs_0921 - putative oxygen-independent coproporphyrinogen III oxidase 906 69.58 0 970424..971041 - 205 121593342 - Ajs_0922 - RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 907 68.84 0 971087..971821 - 244 121593343 - Ajs_0923 - ribonuclease PH 908 67.33 0 971898..972800 - 300 121593344 - Ajs_0924 - protein phosphatase 2C domain-containing protein 909 63.03 0 972797..973813 - 338 121593345 - Ajs_0925 - serine/threonine protein kinase 910 68.21 0 973895..974803 + 302 121593346 - Ajs_0926 - hypothetical protein 911 63.30 0 974991..976268 + 425 121593347 - Ajs_0927 - phage integrase family protein 912 58.86 -1 976265..976981 + 238 121593348 - Ajs_0928 - hypothetical protein 913 61.18 -1 977050..977286 + 78 121593349 - Ajs_0929 - phage transcriptional regulator, AlpA 914 64.87 0 977517..978407 + 296 121593350 - Ajs_0930 - hypothetical protein 915 68.58 0 978404..979816 + 470 121593351 - Ajs_0931 - replicative DNA helicase 916 68.18 0 979806..980600 + 264 121593352 - Ajs_0932 - XRE family transcriptional regulator 917 65.36 0 980597..981748 + 383 121593353 - Ajs_0933 - hypothetical protein 918 63.91 0 981691..982053 - 120 121593354 - Ajs_0934 - hypothetical protein 919 64.29 0 982077..982328 + 83 121593355 - Ajs_0935 - hypothetical protein 920 66.97 0 982405..983070 + 221 121593356 - Ajs_0936 - hypothetical protein 921 61.11 -1 983385..984230 + 281 121593357 - Ajs_0937 - hypothetical protein 922 65.03 0 984227..985144 + 305 121593358 - Ajs_0938 - hypothetical protein 923 66.49 0 985362..985940 + 192 121593359 - Ajs_0939 - hypothetical protein 924 61.26 -1 986652..986984 - 110 121593360 - Ajs_0940 - hypothetical protein 925 60.93 -1 986965..987243 - 92 121593361 - Ajs_0941 - hypothetical protein 926 64.99 0 987240..987596 - 118 121593362 - Ajs_0942 - hypothetical protein 927 61.35 -1 987709..987915 + 68 121593363 - Ajs_0943 - hypothetical protein 928 62.42 0 987930..988235 + 101 121593364 - Ajs_0944 - hypothetical protein 929 61.86 0 988266..988619 + 117 121593365 - Ajs_0945 - RelE-like cytotoxic translational repressor of toxin-antitoxin stability system 930 69.12 0 988616..988900 + 94 121593366 - Ajs_0946 - helix-turn-helix domain-containing protein 931 62.48 0 989060..989680 + 206 121593367 - Ajs_0947 - guanylate kinase 932 63.73 0 989696..989899 + 67 121593368 - Ajs_0948 - DNA-directed RNA polymerase subunit omega 933 61.55 -1 990001..992265 + 754 121593369 - Ajs_0949 - (p)ppGpp synthetase I, SpoT/RelA 934 62.21 0 992279..992839 - 186 121593370 - Ajs_0950 - transcription elongation factor GreB 935 62.64 0 993141..993413 - 90 121593371 - Ajs_0951 - hypothetical protein 936 61.05 -1 993663..993929 + 88 121593372 - Ajs_0952 - SSU ribosomal protein S15P 937 64.33 0 994145..996328 + 727 121593373 - Ajs_0953 - polynucleotide phosphorylase/polyadenylase 938 68.86 0 996428..997432 + 334 121593374 - Ajs_0954 - alcohol dehydrogenase 939 66.67 0 997429..998181 + 250 121593375 - Ajs_0955 - triosephosphate isomerase 940 64.57 0 998220..998600 + 126 121593376 - Ajs_0956 - protein translocase subunit secG 941 56.39 -2 998890..999249 + 119 121593377 - Ajs_0957 - NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 942 61.67 -1 999274..999753 + 159 121593378 - Ajs_0958 - NADH-quinone oxidoreductase, B subunit 943 61.25 -1 999764..1000372 + 202 121593379 - Ajs_0959 - NADH (or F420H2) dehydrogenase, subunit C 66.47 MEAN 4.71 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.