version 1.0
Acidovorax sp. JS42, complete genome - 1..4448856 4007 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 805 60.61 -1 862937..863497 - 186 121593241 - Ajs_0819 - hypothetical protein 806 60.33 -1 863497..863796 + 99 121593242 - Ajs_0820 - hypothetical protein 807 63.15 0 863779..864744 - 321 121593243 - Ajs_0821 - hypothetical protein 808 61.35 -1 864799..865080 + 93 121593244 - Ajs_0822 - hypothetical protein 809 62.17 0 865077..865787 + 236 121593245 - Ajs_0823 - metallophosphoesterase 810 60.81 -1 865756..866028 + 90 121593246 - Ajs_0824 - hypothetical protein 811 62.15 0 866414..867232 - 272 121593247 - Ajs_0825 - hypothetical protein 812 62.85 0 867344..868051 - 235 121593248 - Ajs_0826 - DNA ligase III-like protein 813 53.60 -2 868057..868584 - 175 121593249 - Ajs_0827 - hypothetical protein 814 57.22 -1 868581..869978 - 465 121593250 - Ajs_0828 - hypothetical protein 815 58.84 -1 870052..871635 - 527 121593251 - Ajs_0829 - chromosome segregation ATPase-like protein 816 64.48 0 871648..872469 - 273 121593252 - Ajs_0830 - IstB ATP binding domain-containing protein 817 66.21 0 872459..873991 - 510 121593253 - Ajs_0831 - integrase catalytic subunit 818 66.14 0 874052..874993 - 313 121593254 - Ajs_0832 - DEAD-like helicases-like 819 61.02 -1 875015..880312 - 1765 121593255 - Ajs_0833 - DEAD/DEAH box helicase domain-containing protein 820 57.73 -1 880327..881367 - 346 121593256 - Ajs_0834 - filamentation induced by cAMP protein Fic 821 64.97 0 881907..882671 - 254 121593257 - Ajs_0835 - IstB ATP binding domain-containing protein 822 65.98 0 882668..884263 - 531 121593258 - Ajs_0836 - integrase catalytic subunit 823 58.76 -1 884366..884896 + 176 121593259 - Ajs_0837 - hypothetical protein 824 58.42 -1 885127..886035 - 302 121593260 - Ajs_0838 - plasmid encoded RepA protein 825 58.11 -1 886444..886782 - 112 121593261 - Ajs_0839 - hypothetical protein 826 67.38 0 887111..888094 - 327 121593262 - Ajs_0840 - dimethylallyltranstransferase 827 58.97 -1 888268..888579 + 103 121593263 - Ajs_0841 - 50S ribosomal protein L21P 828 64.73 0 888595..888852 + 85 121593264 rpmA Ajs_0842 - 50S ribosomal protein L27 829 67.11 0 888934..890073 + 379 121593265 obgE Ajs_0843 - GTPase ObgE 830 68.42 0 890147..891289 + 380 121593266 - Ajs_0844 - gamma-glutamyl kinase 831 62.61 0 891336..892025 - 229 121593267 - Ajs_0845 - NUDIX hydrolase 832 65.35 0 892116..893861 + 581 121593268 - Ajs_0846 - prolyl-tRNA synthetase 833 68.34 0 893882..894538 + 218 121593269 - Ajs_0847 - lytic transglycosylase, catalytic 834 65.98 0 894625..895941 - 438 121593270 - Ajs_0848 - hypothetical protein 835 62.12 0 896120..896449 - 109 121593271 - Ajs_0849 - glutaredoxin-like protein 836 73.90 +1 896504..897346 - 280 121593272 - Ajs_0850 - HemK family modification methylase 837 68.30 0 897404..898507 - 367 121593273 - Ajs_0851 - peptide chain release factor 1 838 67.96 0 898621..899931 - 436 121593274 - Ajs_0852 - glutamyl-tRNA reductase 839 65.95 0 900006..900284 + 92 121593275 - Ajs_0853 - hypothetical protein 840 73.75 +1 900286..901188 - 300 121593276 - Ajs_0854 - LysR family transcriptional regulator 841 67.80 0 901231..902292 + 353 121593277 - Ajs_0855 - hypothetical protein 842 70.92 0 902303..903196 + 297 121593278 - Ajs_0856 - N-formylglutamate amidohydrolase 843 73.09 +1 903269..905791 - 840 121593279 - Ajs_0857 - MscS mechanosensitive ion channel 844 72.53 +1 905890..906639 - 249 121593280 - Ajs_0858 - glycerophosphodiester phosphodiesterase 845 67.86 0 906665..907672 - 335 121593281 - Ajs_0859 - ABC transporter related 846 64.31 0 907736..908584 - 282 121593282 - Ajs_0860 - binding-protein-dependent transport systems inner membrane component 847 62.02 0 908587..909468 - 293 121593283 - Ajs_0861 - binding-protein-dependent transport systems inner membrane component 848 63.17 0 909599..910912 - 437 121593284 - Ajs_0862 - extracellular solute-binding protein 849 66.21 0 911149..912453 + 434 121593285 - Ajs_0863 - D-3-phosphoglycerate dehydrogenase 850 67.33 0 912646..916569 + 1307 121593286 - Ajs_0864 - FAD linked oxidase domain-containing protein 851 71.14 0 916566..917057 + 163 121593287 - Ajs_0865 - histidine triad (HIT) protein 852 68.35 0 917221..917637 + 138 121593288 - Ajs_0866 - hypothetical protein 853 63.39 0 917762..918493 + 243 121593289 - Ajs_0867 - ubiquinone/menaquinone biosynthesis methyltransferases 854 70.04 0 918532..919539 + 335 121593290 - Ajs_0868 - import inner membrane translocase, subunit Tim44 855 70.64 0 919620..920198 + 192 121593291 - Ajs_0869 - hypothetical protein 856 64.94 0 920195..921760 + 521 121593292 ubiB Ajs_0870 - putative ubiquinone biosynthesis protein UbiB 857 63.42 0 921799..923247 + 482 121593293 - Ajs_0871 - Na+/solute symporter 858 57.86 -1 923278..923595 + 105 121593294 - Ajs_0872 - FmdB family regulatory protein 859 64.58 0 923611..924234 + 207 121593295 - Ajs_0873 - hypothetical protein 860 64.29 0 924327..926138 + 603 121593296 - Ajs_0874 - aspartyl-tRNA synthetase 861 68.66 0 926235..927038 + 267 121593297 - Ajs_0875 - hypothetical protein 862 66.45 0 927049..927519 + 156 121593298 - Ajs_0876 - NUDIX hydrolase 863 67.19 0 927516..928283 + 255 121593299 - Ajs_0877 - endonuclease/exonuclease/phosphatase 864 72.28 +1 928288..929517 + 409 121593300 - Ajs_0878 - phospholipase D/transphosphatidylase 865 65.56 0 929645..930370 + 241 121593301 - Ajs_0879 - GTP cyclohydrolase 866 65.25 0 930374..930796 + 140 121593302 - Ajs_0880 - BLUF domain-containing protein 867 72.04 +1 931017..931928 + 303 121593303 - Ajs_0881 - hypothetical protein 868 73.87 +1 931990..932808 + 272 121593304 - Ajs_0882 - hypothetical protein 869 72.93 +1 932798..933484 - 228 121593305 - Ajs_0883 - hypothetical protein 870 69.77 0 933560..934171 - 203 121593306 - Ajs_0884 - hypothetical protein 871 71.84 +1 934301..934957 + 218 121593307 - Ajs_0885 - lysine exporter protein LysE/YggA 872 73.86 +1 935024..936427 - 467 121593308 - Ajs_0886 - amidase 873 68.01 0 936531..938021 - 496 121593309 - Ajs_0887 - extracellular solute-binding protein 874 71.10 0 938120..938977 - 285 121593310 - Ajs_0888 - ABC transporter related 875 72.04 +1 938974..939978 - 334 121593311 - Ajs_0889 - oligopeptide/dipeptide ABC transporter, ATPase subunit 876 71.69 +1 939975..940850 - 291 121593312 - Ajs_0890 - binding-protein-dependent transport systems inner membrane component 877 70.03 0 940847..941857 - 336 121593313 - Ajs_0891 - binding-protein-dependent transport systems inner membrane component 878 61.24 -1 941985..942242 + 85 121593314 - Ajs_0892 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 879 67.77 0 942306..942941 - 211 121593315 - Ajs_0893 - peptidyl-tRNA hydrolase 880 63.32 0 943076..943702 - 208 121593316 - Ajs_0894 - 50S ribosomal protein L25P 881 61.80 0 943856..944821 - 321 121593317 - Ajs_0895 - Fis family transcriptional regulator 882 56.69 -2 944987..945838 - 283 121593318 - Ajs_0896 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 883 67.05 0 945848..946363 - 171 121593319 - Ajs_0897 - putative lipoprotein 884 65.61 0 946360..948159 - 599 121593320 - Ajs_0898 - TPR repeat-containing protein 885 69.36 0 948189..949004 + 271 121593321 - Ajs_0899 - formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase 886 66.62 0 949098..951080 + 660 121593322 - Ajs_0900 - hypothetical protein 887 71.14 0 951077..952150 + 357 121593323 - Ajs_0901 - A/G-specific DNA-adenine glycosylase 888 66.78 0 952261..953124 - 287 121593324 - Ajs_0902 - hypothetical protein 889 69.73 0 953128..954792 - 554 121593325 - Ajs_0903 - DNA repair protein RecN 890 66.78 0 954795..955691 - 298 121593326 ppnK Ajs_0904 - inorganic polyphosphate/ATP-NAD kinase 891 62.19 0 955720..956724 + 334 121593327 hrcA Ajs_0905 - heat-inducible transcription repressor 892 63.58 0 957985..958308 + 107 121593328 - Ajs_0906 - transposase IS3/IS911 family protein 893 63.93 0 958305..959219 + 304 121593329 - Ajs_0907 - integrase catalytic subunit 894 56.93 -2 959306..960250 + 314 121593330 - Ajs_0908 - hypothetical protein 895 61.39 -1 960160..961239 - 359 121593331 - Ajs_0909 - integrase catalytic subunit 896 60.42 -1 961319..961702 + 127 121593332 - Ajs_0910 - hypothetical protein 897 66.33 0 961715..962617 - 300 121593333 - Ajs_0911 - hypothetical protein 898 63.46 0 962614..963237 - 207 121593334 - Ajs_0912 - hypothetical protein 899 62.10 0 963938..965164 + 408 121593335 - Ajs_0914 - transposase, mutator type 900 59.20 -1 966008..966529 + 173 121593336 - Ajs_0916 - hypothetical protein 901 63.05 0 966891..967499 + 202 121593337 - Ajs_0917 - hypothetical protein 902 66.50 0 967509..968093 + 194 121593338 - Ajs_0918 - isochorismatase hydrolase 903 64.96 0 968112..968579 + 155 121593339 - Ajs_0919 - hypothetical protein 904 68.17 0 968674..969006 + 110 121593340 - Ajs_0920 - hypothetical protein 66.47 MEAN 4.71 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0