version 1.0
Acidovorax sp. JS42, complete genome - 1..4448856 4007 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 387 60.16 -1 405293..405661 + 122 121592823 - Ajs_0391 - 50S ribosomal protein L14P 388 59.19 -1 405672..405992 + 106 121592824 - Ajs_0392 - 50S ribosomal protein L24P 389 59.07 -1 406002..406541 + 179 121592825 rplE Ajs_0393 - 50S ribosomal protein L5 390 61.44 -1 406551..406856 + 101 121592826 - Ajs_0394 - SSU ribosomal protein S14P 391 59.85 -1 406877..407272 + 131 121592827 - Ajs_0395 - SSU ribosomal protein S8P 392 58.80 -1 407297..407830 + 177 121592828 - Ajs_0396 - 50S ribosomal protein L6P 393 62.30 0 407842..408207 + 121 121592829 - Ajs_0397 - 50S ribosomal protein L18P 394 61.69 -1 408225..408746 + 173 121592830 rpsE Ajs_0398 - 30S ribosomal protein S5 395 52.46 -2 408761..408943 + 60 121592831 - Ajs_0399 - 50S ribosomal protein L30P 396 62.04 0 408954..409385 + 143 121592832 - Ajs_0400 - 50S ribosomal protein L15P 397 57.05 -2 409409..410728 + 439 121592833 secY Ajs_0401 - preprotein translocase subunit SecY 398 53.51 -2 410873..410986 + 37 121592834 - Ajs_0402 - 50S ribosomal protein L36P 399 57.92 -1 411010..411375 + 121 121592835 rpsM Ajs_0403 - 30S ribosomal protein S13 400 59.51 -1 411393..411797 + 134 121592836 - Ajs_0404 - 30S ribosomal protein S11 401 57.69 -1 411886..412509 + 207 121592837 rpsD Ajs_0405 - 30S ribosomal protein S4 402 59.72 -1 412621..413613 + 330 121592838 - Ajs_0406 - DNA-directed RNA polymerase subunit alpha 403 59.49 -1 413703..414092 + 129 121592839 - Ajs_0407 - 50S ribosomal protein L17P 404 65.10 0 414342..415682 - 446 121592840 - Ajs_0408 - UDP-glucose 6-dehydrogenase 405 64.09 0 415679..416689 - 336 121592841 - Ajs_0409 - NAD-dependent epimerase/dehydratase 406 68.45 0 416686..418203 - 505 121592842 - Ajs_0410 - glycosyltransferase 407 67.25 0 418307..419338 + 343 121592843 - Ajs_0411 - glycosyl transferase family protein 408 75.70 +1 419335..420264 + 309 121592844 - Ajs_0412 - hypothetical protein 409 73.38 +1 420503..421441 - 312 121592845 - Ajs_0413 - uroporphyrin-III C/tetrapyrrole methyltransferase 410 73.93 +1 421441..421839 + 132 121592846 - Ajs_0414 - hypothetical protein 411 68.18 0 421898..422491 + 197 121592847 - Ajs_0415 - phosphoheptose isomerase 412 70.52 0 422488..423162 + 224 121592848 - Ajs_0416 - transport-associated 413 66.88 0 423260..424189 - 309 121592849 - Ajs_0417 - 3-hydroxyisobutyrate dehydrogenase 414 64.03 0 424254..425390 - 378 121592850 - Ajs_0418 - twitching motility protein 415 65.08 0 425437..426066 - 209 121592851 - Ajs_0419 - cyclic nucleotide-binding protein 416 63.51 0 426143..427186 - 347 121592852 - Ajs_0420 - twitching motility protein 417 70.57 0 427226..427942 + 238 121592853 - Ajs_0421 - alanine racemase domain-containing protein 418 69.66 0 427981..429117 + 378 121592854 - Ajs_0422 - aminotransferase, class V 419 70.64 0 429185..430543 + 452 121592855 - Ajs_0423 - hypothetical protein 420 71.17 0 430603..431091 - 162 121592856 - Ajs_0424 - hypothetical protein 421 68.42 0 431151..432635 - 494 121592857 - Ajs_0425 - FAD linked oxidase domain-containing protein 422 60.87 -1 432693..433382 - 229 121592858 - Ajs_0426 - MT-A70 family protein 423 58.16 -1 433385..433972 - 195 121592859 - Ajs_0427 - hypothetical protein 424 62.78 0 434125..434973 - 282 121592860 - Ajs_0428 - formyltetrahydrofolate deformylase 425 72.51 +1 437371..438225 - 284 121592861 - Ajs_0430 - hypothetical protein 426 68.56 0 438515..440950 + 811 121592862 - Ajs_0431 - ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 427 67.45 0 441129..443045 + 638 121592863 - Ajs_0432 - signal transduction histidine kinase, nitrate/nitrite-specific, NarQ 428 68.30 0 443042..443713 + 223 121592864 - Ajs_0433 - two component LuxR family transcriptional regulator 429 63.61 0 443860..445167 + 435 121592865 - Ajs_0434 - major facilitator superfamily transporter 430 63.97 0 445188..446633 + 481 121592866 - Ajs_0435 - nitrite transporter 431 64.75 0 446670..450470 + 1266 121592867 - Ajs_0436 - respiratory nitrate reductase alpha subunit apoprotein 432 64.83 0 450489..452012 + 507 121592868 - Ajs_0437 - respiratory nitrate reductase beta subunit 433 70.24 0 452032..452730 + 232 121592869 - Ajs_0438 - respiratory nitrate reductase chaperone NarJ 434 65.85 0 452727..453461 + 244 121592870 - Ajs_0439 - respiratory nitrate reductase gamma subunit 435 72.64 +1 453552..454388 + 278 121592871 - Ajs_0440 - PpiC-type peptidyl-prolyl cis-trans isomerase 436 68.14 0 454410..455087 + 225 121592872 - Ajs_0441 - carbonate dehydratase 437 72.06 +1 455124..456458 + 444 121592873 - Ajs_0442 - NnrS family protein 438 73.00 +1 456464..457126 + 220 121592874 - Ajs_0443 - nitroreductase 439 69.48 0 457127..457552 + 141 121592875 - Ajs_0444 - hypothetical protein 440 71.61 +1 457557..458102 + 181 121592876 - Ajs_0445 - hemerythrin HHE cation binding domain-containing protein 441 63.23 0 458336..458626 - 96 121592877 - Ajs_0446 - hypothetical protein 442 73.91 +1 458803..460017 - 404 121592878 - Ajs_0447 - hypothetical protein 443 73.00 +1 460022..460810 - 262 121592879 - Ajs_0448 - IclR family transcriptional regulator 444 66.46 0 460926..461909 + 327 121592880 - Ajs_0449 - fumarylacetoacetate (FAA) hydrolase 445 71.41 +1 461986..462954 + 322 121592881 - Ajs_0450 - hypothetical protein 446 71.31 +1 463019..465085 - 688 121592882 - Ajs_0451 - molybdopterin oxidoreductase 447 69.45 0 465207..466355 + 382 121592883 - Ajs_0452 - extracellular ligand-binding receptor 448 67.25 0 466471..467676 + 401 121592884 - Ajs_0453 - amidohydrolase 449 71.39 +1 467777..468877 + 366 121592885 - Ajs_0454 - hypothetical protein 450 62.40 0 468962..469219 + 85 121592886 - Ajs_0455 - acyl-CoA-binding protein 451 71.47 +1 469304..470449 - 381 121592887 - Ajs_0456 - putative zinc protease protein 452 69.05 0 470524..471195 + 223 121592888 - Ajs_0457 - DNA-3-methyladenine glycosylase I 453 72.49 +1 471265..471882 - 205 121592889 - Ajs_0458 - hypothetical protein 454 70.18 0 471935..472105 - 56 121592890 - Ajs_0459 - hypothetical protein 455 68.22 0 472395..473678 + 427 121592891 - Ajs_0460 - cyclopropane-fatty-acyl-phospholipid synthase 456 66.98 0 473699..474022 + 107 121592892 - Ajs_0461 - hypothetical protein 457 67.92 0 474060..475097 - 345 121592893 - Ajs_0462 - hypothetical protein 458 63.64 0 475263..476252 - 329 121592894 - Ajs_0463 - hypothetical protein 459 71.15 0 476444..477691 - 415 121592895 - Ajs_0464 - putative phenylacetate-CoA ligase 460 63.95 0 477784..478593 - 269 121592896 - Ajs_0465 - ABC transporter related 461 67.12 0 478790..480115 - 441 121592897 - Ajs_0466 - hypothetical protein 462 65.18 0 480192..481268 - 358 121592898 - Ajs_0467 - inner-membrane translocator 463 64.95 0 481387..482316 - 309 121592899 - Ajs_0468 - inner-membrane translocator 464 62.09 0 482327..483112 - 261 121592900 - Ajs_0469 - ABC transporter related 465 65.20 0 483135..485183 - 682 121592901 - Ajs_0470 - AMP-dependent synthetase and ligase 466 72.69 +1 485258..487000 + 580 121592902 - Ajs_0471 - peptidoglycan binding domain-containing protein 467 75.56 +1 487005..487814 + 269 121592903 - Ajs_0472 - hypothetical protein 468 71.18 +1 487961..488779 + 272 121592904 - Ajs_0473 - Crp/FNR family transcriptional regulator 469 73.04 +1 488791..489873 + 360 121592905 - Ajs_0474 - RNA-binding S4 domain-containing protein 470 64.87 0 490220..492172 + 650 121592906 - Ajs_0475 - heat shock protein 90 471 66.36 0 492376..493368 + 330 121592907 - Ajs_0476 - hypothetical protein 472 63.33 0 493585..494184 + 199 121592908 - Ajs_0477 - hypothetical protein 473 69.93 0 494329..494880 + 183 121592909 - Ajs_0478 - hypothetical protein 474 68.49 0 494887..495927 - 346 121592910 - Ajs_0479 - serine/threonine protein kinase 475 69.65 0 495963..497402 - 479 121592911 - Ajs_0480 - serine/threonine protein kinase 476 73.25 +1 497446..498204 - 252 121592912 - Ajs_0481 - metallophosphoesterase 477 69.30 0 498335..498751 - 138 121592913 - Ajs_0482 - OsmC family protein 478 68.42 0 498813..499268 - 151 121592914 - Ajs_0483 - MarR family transcriptional regulator 479 67.01 0 504022..504597 - 191 121592915 - Ajs_0484 - CRISPR-associated Csy4 family protein 480 63.35 0 504611..505636 - 341 121592916 - Ajs_0485 - CRISPR-associated Csy3 family protein 481 66.76 0 505693..506775 - 360 121592917 - Ajs_0486 - CRISPR-associated Csy2 family protein 482 59.82 -1 506772..508217 - 481 121592918 - Ajs_0487 - CRISPR-associated Csy1 family protein 483 66.50 0 508222..511758 - 1178 121592919 - Ajs_0488 - CRISPR-associated helicase Cas3 family protein 484 61.29 -1 511755..512759 - 334 121592920 - Ajs_0489 - CRISPR-associated Cas1 family protein 485 71.07 0 512795..513976 - 393 121592921 - Ajs_0490 - alanine racemase domain-containing protein 486 70.23 0 513960..514604 - 214 121592922 - Ajs_0491 - phosphoglycerate mutase 66.47 MEAN 4.71 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0