version 1.0
Acidovorax sp. JS42, complete genome - 1..4448856 4007 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3747 64.96 0 4137896..4142125 - 1409 121596183 - Ajs_3896 - DNA-directed RNA polymerase subunit beta' 3748 63.88 0 4142256..4146380 - 1374 121596184 - Ajs_3897 - DNA-directed RNA polymerase, beta subunit 3749 61.42 -1 4146654..4147034 - 126 121596185 - Ajs_3898 - 50S ribosomal protein L12P 3750 60.75 -1 4147084..4147590 - 168 121596186 - Ajs_3899 - 50S ribosomal protein L10P 3751 63.22 0 4147834..4148529 - 231 121596187 rplA Ajs_3900 - 50S ribosomal protein L1 3752 57.87 -1 4148530..4148961 - 143 121596188 - Ajs_3901 - 50S ribosomal protein L11P 3753 55.33 -2 4149071..4149661 - 196 121596189 - Ajs_3902 - transcription antitermination protein nusG 3754 54.95 -2 4149661..4150044 - 127 121596190 secE Ajs_3903 - preprotein translocase subunit SecE 3755 63.73 0 4150221..4151411 - 396 121596191 - Ajs_3904 - elongation factor Tu 3756 64.20 0 4152029..4152352 + 107 121596192 - Ajs_3905 - transposase IS3/IS911 family protein 3757 62.78 0 4159212..4160162 - 316 121596193 - Ajs_3907 - glutathione synthetase 3758 67.66 0 4160198..4161406 - 402 121596194 - Ajs_3908 - benzoate transporter 3759 64.85 0 4161510..4163378 - 622 121596195 - Ajs_3909 - K+ potassium transporter 3760 63.81 0 4163519..4164814 - 431 121596196 - Ajs_3910 - glutamate--cysteine ligase 3761 68.37 0 4164879..4166345 - 488 121596197 - Ajs_3911 - cation transporter 3762 70.03 0 4166361..4167815 - 484 121596198 trkA Ajs_3912 - potassium transporter peripheral membrane component 3763 68.15 0 4167880..4169160 - 426 121596199 - Ajs_3913 - gamma-glutamyl phosphate reductase 3764 71.43 +1 4169251..4169544 + 97 121596200 - Ajs_3914 - hypothetical protein 3765 71.92 +1 4169601..4170647 - 348 121596201 holA Ajs_3915 - DNA polymerase III subunit delta 3766 70.98 0 4170721..4171230 - 169 121596202 - Ajs_3916 - rare lipoprotein B 3767 66.78 0 4171244..4173976 - 910 121596203 - Ajs_3917 - leucyl-tRNA synthetase 3768 63.27 0 4174129..4175217 + 362 121596204 - Ajs_3918 - transposase, IS4 family protein 3769 68.85 0 4175445..4176725 + 426 121596205 - Ajs_3919 - MscS mechanosensitive ion channel 3770 69.61 0 4176810..4177250 - 146 121596206 - Ajs_3920 - biopolymer transport protein ExbD/TolR 3771 71.52 +1 4177265..4177924 - 219 121596207 - Ajs_3921 - MotA/TolQ/ExbB proton channel 3772 69.46 0 4177932..4178753 - 273 121596208 - Ajs_3922 - dihydrodipicolinate reductase 3773 66.85 0 4178830..4179381 - 183 121596209 - Ajs_3923 - SmpA/OmlA domain-containing protein 3774 61.11 -1 4179450..4179899 + 149 121596210 - Ajs_3924 - ferric uptake regulator family protein 3775 66.98 0 4179913..4180869 - 318 121596211 - Ajs_3925 - HPr kinase/phosphorylase 3776 63.68 0 4180891..4181358 - 155 121596212 - Ajs_3926 - PTS IIA-like nitrogen-regulatory protein PtsN 3777 58.19 -1 4181492..4181845 - 117 121596213 - Ajs_3927 - SSU ribosomal protein S30P / sigma 54 modulation protein 3778 68.30 0 4182222..4183142 + 306 121596214 - Ajs_3928 - phosphoribosylaminoimidazole-succinocarboxamide synthase 3779 64.82 0 4183196..4185304 - 702 121596215 - Ajs_3929 - TonB-dependent siderophore receptor 3780 73.09 +1 4185786..4186610 - 274 121596216 - Ajs_3930 - protein of unknown function DUF306, Meta and HslJ 3781 65.13 0 4186652..4187560 - 302 121596217 - Ajs_3931 - thioredoxin 3782 69.07 0 4187745..4188326 + 193 121596218 - Ajs_3932 - PfpI family intracellular peptidase 3783 70.90 0 4188426..4188803 + 125 121596219 - Ajs_3933 - hypothetical protein 3784 73.29 +1 4188875..4189372 + 165 121596220 - Ajs_3934 - phosphoribosylaminoimidazole carboxylase, catalytic subunit 3785 70.83 0 4189369..4190544 + 391 121596221 - Ajs_3935 - phosphoribosylaminoimidazole carboxylase ATPase subunit 3786 72.67 +1 4190556..4191554 + 332 121596222 - Ajs_3936 - translation factor SUA5 3787 66.88 0 4191627..4192580 + 317 121596223 - Ajs_3937 - lipase 3788 70.53 0 4192724..4193266 - 180 121596224 - Ajs_3938 - hypothetical protein 3789 72.47 +1 4193452..4194933 - 493 121596225 - Ajs_3939 - D-alanyl-D-alanine carboxypeptidase PBP3 3790 74.68 +1 4194984..4195694 + 236 121596226 - Ajs_3940 - peptidase M22, glycoprotease 3791 69.60 0 4195691..4196167 + 158 121596227 - Ajs_3941 - SSU ribosomal protein S18P alanine acetyltransferase 3792 78.12 +2 4196164..4196940 + 258 121596228 - Ajs_3942 - phage SPO1 DNA polymerase-related protein 3793 64.24 0 4197120..4197614 + 164 121596229 - Ajs_3943 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 3794 68.18 0 4197655..4199502 + 615 121596230 - Ajs_3944 - aldehyde ferredoxin oxidoreductase 3795 72.62 +1 4199626..4200918 + 430 121596231 - Ajs_3945 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 3796 68.24 0 4201008..4201262 + 84 121596232 - Ajs_3946 - thiamineS protein 3797 76.40 +2 4201325..4201591 + 88 121596233 - Ajs_3947 - hypothetical protein 3798 63.12 0 4201823..4202809 + 328 121596234 - Ajs_3948 - magnesium and cobalt transport protein CorA 3799 68.65 0 4203022..4203777 - 251 121596235 - Ajs_3949 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 3800 65.95 0 4203863..4205542 - 559 121596236 - Ajs_3950 - AMP-dependent synthetase and ligase 3801 66.25 0 4205672..4207096 - 474 121596237 - Ajs_3951 - NAD(P) transhydrogenase, beta subunit 3802 62.12 0 4207108..4207437 - 109 121596238 - Ajs_3952 - NAD(P) transhydrogenase, subunit alpha part 2 3803 69.20 0 4207486..4208196 - 236 121596239 - Ajs_3953 - hypothetical protein 3804 69.62 0 4208230..4209345 - 371 121596240 - Ajs_3954 - NAD(P)(+) transhydrogenase (AB-specific) 3805 65.45 0 4209557..4210621 - 354 121596241 - Ajs_3955 - fructose-bisphosphate aldolase 3806 67.64 0 4210775..4212211 - 478 121596242 - Ajs_3956 - pyruvate kinase 3807 69.94 0 4212295..4214460 - 721 121596243 - Ajs_3957 - aminopeptidase P 3808 71.45 +1 4214616..4215431 - 271 121596244 - Ajs_3958 - nucleotidyl transferase 3809 69.02 0 4215595..4217631 + 678 121596245 - Ajs_3959 - transketolase 3810 64.07 0 4217685..4218686 + 333 121596246 - Ajs_3960 - glyceraldehyde-3-phosphate dehydrogenase 3811 70.94 0 4218831..4219391 + 186 121596247 - Ajs_3961 - hypothetical protein 3812 70.14 0 4219489..4219833 - 114 121596248 - Ajs_3962 - ribosomal subunit interface protein, putative 3813 70.81 0 4220005..4220922 + 305 121596249 - Ajs_3963 - peptidase C26 3814 69.41 0 4220980..4221453 - 157 121596250 - Ajs_3964 - peptidylprolyl isomerase, FKBP-type 3815 72.32 +1 4221565..4222608 - 347 121596251 - Ajs_3965 - pirin domain-containing protein 3816 69.46 0 4222872..4223300 - 142 121596252 - Ajs_3966 - 3-demethylubiquinone-9 3-methyltransferase 3817 73.57 +1 4223343..4223762 - 139 121596253 - Ajs_3967 - hypothetical protein 3818 74.23 +1 4223942..4224946 - 334 121596254 - Ajs_3968 - short-chain dehydrogenase/reductase SDR 3819 71.66 +1 4225118..4225678 - 186 121596255 - Ajs_3969 - hypothetical protein 3820 74.02 +1 4225743..4226504 - 253 121596256 - Ajs_3970 - DTW domain-containing protein 3821 71.74 +1 4226688..4227593 + 301 121596257 - Ajs_3971 - IclR family transcriptional regulator 3822 73.61 +1 4227590..4228741 + 383 121596258 - Ajs_3972 - thiolase 3823 73.81 +1 4228747..4229124 + 125 121596259 - Ajs_3973 - hypothetical protein 3824 69.10 0 4229306..4230292 + 328 121596260 - Ajs_3974 - hypothetical protein 3825 72.56 +1 4230496..4232583 + 695 121596261 - Ajs_3975 - CoA-binding domain-containing protein 3826 68.38 0 4232803..4233501 - 232 121596262 - Ajs_3976 - glutathione S-transferase domain-containing protein 3827 71.78 +1 4233516..4234277 - 253 121596263 fabG Ajs_3977 - 3-ketoacyl-(acyl-carrier-protein) reductase 3828 70.48 0 4234296..4234688 - 130 121596264 - Ajs_3978 - glyoxalase/bleomycin resistance protein/dioxygenase 3829 45.69 -2 4235570..4236160 - 196 121596265 - Ajs_3979 - hypothetical protein 3830 47.24 -2 4236243..4237565 - 440 121596266 - Ajs_3980 - hypothetical protein 3831 32.58 -2 4237635..4238033 - 132 121596267 - Ajs_3981 - hypothetical protein 3832 61.38 -1 4238040..4238285 - 81 121596268 - Ajs_3982 - hypothetical protein 3833 42.88 -2 4238411..4238923 - 170 121596269 - Ajs_3983 - putative signal peptide protein 3834 48.48 -2 4239000..4239329 - 109 121596270 - Ajs_3984 - hypothetical protein 3835 45.74 -2 4240104..4240643 - 179 121596271 - Ajs_3985 - hypothetical protein 3836 60.92 -1 4241756..4241929 - 57 121596272 - Ajs_3988 - hypothetical protein 3837 78.06 +2 4242197..4242547 - 116 121596273 - Ajs_3989 - hypothetical protein 3838 66.56 0 4242552..4245497 - 981 121596274 - Ajs_3990 - DNA topoisomerase III 3839 67.76 0 4245608..4246249 + 213 121596275 - Ajs_3991 - nuclear protein SET 3840 74.94 +1 4246246..4247103 + 285 121596276 - Ajs_3992 - biotin--acetyl-CoA-carboxylase ligase 3841 75.41 +1 4247162..4247893 + 243 121596277 - Ajs_3993 - sporulation domain-containing protein 3842 70.18 0 4248015..4248983 - 322 121596278 - Ajs_3994 - hypothetical protein 3843 71.25 +1 4249285..4250223 - 312 121596279 - Ajs_3995 - N-formylglutamate amidohydrolase 3844 67.70 0 4250242..4251207 - 321 121596280 - Ajs_3996 - hypothetical protein 3845 73.03 +1 4251318..4252244 + 308 121596281 - Ajs_3997 - LysR family transcriptional regulator 3846 70.18 0 4252325..4253806 - 493 121596282 - Ajs_3998 - integral membrane sensor signal transduction histidine kinase 66.47 MEAN 4.71 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0