version 1.0
Acidovorax sp. JS42, complete genome - 1..4448856 4007 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3653 77.19 +2 4036309..4037619 - 436 121596089 - Ajs_3802 - flagellar hook-length control protein 3654 70.32 0 4037622..4038086 - 154 121596090 - Ajs_3803 - flagellar export protein FliJ 3655 70.61 0 4038114..4039481 - 455 121596091 - Ajs_3804 - flagellar protein export ATPase FliI 3656 72.11 +1 4039507..4040241 - 244 121596092 - Ajs_3805 - flagellar assembly protein FliH 3657 65.46 0 4040251..4041246 - 331 121596093 - Ajs_3806 - flagellar motor switch protein FliG 3658 69.79 0 4041280..4042974 - 564 121596094 - Ajs_3807 - flagellar M-ring protein FliF 3659 64.74 0 4043147..4043458 + 103 121596095 - Ajs_3808 - flagellar hook-basal body complex subunit FliE 3660 64.33 0 4043640..4043939 - 99 121596096 - Ajs_3809 - flagellar protein FliT 3661 60.33 -1 4043942..4044367 - 141 121596097 - Ajs_3810 - flagellar protein FliS 3662 61.94 0 4044510..4045949 - 479 121596098 - Ajs_3811 - flagellar hook-associated 2 domain-containing protein 3663 60.48 -1 4046143..4046982 - 279 121596099 - Ajs_3812 - flagellin domain-containing protein 3664 60.83 -1 4047244..4048083 - 279 121596100 - Ajs_3813 - flagellin domain-containing protein 3665 61.29 -1 4048345..4049181 - 278 121596101 - Ajs_3814 - flagellin domain-containing protein 3666 65.39 0 4049628..4050488 + 286 121596102 - Ajs_3815 - MotA/TolQ/ExbB proton channel 3667 64.76 0 4050515..4051456 + 313 121596103 - Ajs_3816 - OmpA/MotB domain-containing protein 3668 60.72 -1 4051518..4051904 + 128 121596104 - Ajs_3817 - response regulator receiver protein 3669 68.73 0 4051907..4052536 + 209 121596105 - Ajs_3818 - chemotaxis phosphatase, CheZ 3670 68.54 0 4052759..4053931 + 390 121596106 - Ajs_3819 - type III secretion exporter 3671 68.06 0 4053928..4056012 + 694 121596107 - Ajs_3820 - flagellar biosynthesis protein FlhA 3672 70.94 0 4056009..4057601 + 530 121596108 - Ajs_3821 - GTP-binding signal recognition particle 3673 72.68 +1 4057591..4058388 + 265 121596109 - Ajs_3822 - hypothetical protein 3674 66.81 0 4058393..4059106 + 237 121596110 - Ajs_3823 - FliA/WhiG family RNA polymerase sigma factor 3675 69.47 0 4059318..4059674 - 118 121596111 - Ajs_3824 - hypothetical protein 3676 68.52 0 4059722..4060045 - 107 121596112 - Ajs_3825 - anti-sigma-28 factor, FlgM 3677 70.12 0 4060139..4060891 - 250 121596113 - Ajs_3826 - SAF domain-containing protein 3678 66.89 0 4061078..4061533 + 151 121596114 - Ajs_3827 - flagellar basal-body rod protein FlgB 3679 65.93 0 4061555..4061959 + 134 121596115 - Ajs_3828 - flagellar basal-body rod protein FlgC 3680 66.67 0 4061981..4062631 + 216 121596116 - Ajs_3829 - flagellar hook capping protein 3681 64.56 0 4062660..4064276 + 538 121596117 - Ajs_3830 - hypothetical protein 3682 70.99 0 4064303..4065043 + 246 121596118 - Ajs_3831 - flagellar basal-body rod protein FlgF 3683 65.77 0 4065062..4065844 + 260 121596119 - Ajs_3832 - flagellar basal-body rod protein FlgG 3684 69.60 0 4065868..4066584 + 238 121596120 - Ajs_3833 - flagellar L-ring protein 3685 73.19 +1 4066585..4067565 + 326 121596121 - Ajs_3834 - hypothetical protein 3686 71.11 0 4067743..4068867 + 374 121596122 flgI Ajs_3835 - flagellar basal body P-ring protein 3687 70.15 0 4068920..4069894 + 324 121596123 - Ajs_3836 - flagellar rod assembly protein/muramidase FlgJ 3688 63.34 0 4069921..4071996 + 691 121596124 - Ajs_3837 - flagellar hook-associated protein FlgK 3689 69.44 0 4072008..4073270 + 420 121596125 - Ajs_3838 - flagellar hook-associated protein 3 3690 71.62 +1 4073359..4074570 + 403 121596126 - Ajs_3839 - putative signal transduction protein 3691 69.95 0 4074587..4076047 + 486 121596127 - Ajs_3840 - sodium:neurotransmitter symporter 3692 73.77 +1 4076186..4077706 + 506 121596128 - Ajs_3841 - 2-nitropropane dioxygenase, NPD 3693 71.06 0 4077756..4079213 - 485 121596129 - Ajs_3842 - GntR family transcriptional regulator 3694 70.17 0 4079358..4079957 + 199 121596130 - Ajs_3843 - hypothetical protein 3695 74.18 +1 4080026..4080970 + 314 121596131 - Ajs_3844 - hypothetical protein 3696 69.40 0 4081034..4082314 + 426 121596132 - Ajs_3845 - GntR family transcriptional regulator 3697 73.17 +1 4082428..4083303 + 291 121596133 - Ajs_3846 - PhzF family phenazine biosynthesis protein 3698 71.49 +1 4083300..4084274 + 324 121596134 - Ajs_3847 - hypothetical protein 3699 71.35 +1 4084452..4085540 + 362 121596135 - Ajs_3848 - hypothetical protein 3700 66.07 0 4085574..4086752 + 392 121596136 - Ajs_3849 - putative UreA/short-chain amide ABC transporter 3701 71.03 0 4087098..4088219 + 373 121596137 - Ajs_3850 - short-chain dehydrogenase/reductase SDR 3702 69.05 0 4088280..4088951 + 223 121596138 - Ajs_3851 - phosphoglycerate mutase 3703 70.00 0 4089017..4089886 - 289 121596139 - Ajs_3852 - creatininase 3704 72.38 +1 4089895..4090647 + 250 121596140 - Ajs_3853 - metal-dependent hydrolases related to alanyl-tRNA synthetase 3705 72.40 +1 4090700..4092916 + 738 121596141 - Ajs_3854 - cytochrome c biogenesis protein, transmembrane region 3706 73.83 +1 4092917..4093963 - 348 121596142 - Ajs_3855 - hypothetical protein 3707 75.14 +1 4094145..4095395 + 416 121596143 - Ajs_3856 - Na+/H+ antiporter NhaA 3708 67.44 0 4095445..4095960 + 171 121596144 - Ajs_3857 - CoA-binding domain-containing protein 3709 69.91 0 4096015..4097340 + 441 121596145 - Ajs_3858 - O-acetylhomoserine/O-acetylserine sulfhydrylase 3710 65.04 0 4097393..4098376 - 327 121596146 - Ajs_3859 - integral membrane protein TerC 3711 71.41 +1 4098504..4099430 + 308 121596147 - Ajs_3860 - LysR family transcriptional regulator 3712 69.54 0 4099532..4100644 + 370 121596148 - Ajs_3861 - uroporphyrinogen decarboxylase 3713 73.29 +1 4101249..4103468 + 739 121596149 - Ajs_3862 - primosomal protein N' 3714 68.21 0 4103607..4104707 + 366 121596150 - Ajs_3863 - L-asparaginases, type II 3715 70.85 0 4104916..4105872 - 318 121596151 - Ajs_3864 - auxin efflux carrier 3716 67.92 0 4106049..4108118 + 689 121596152 - Ajs_3865 - UvrD/REP helicase 3717 68.74 0 4108123..4108557 + 144 121596153 - Ajs_3866 - hypothetical protein 3718 70.77 0 4108563..4109780 + 405 121596154 - Ajs_3867 - phospholipase A1 3719 67.96 0 4110022..4110408 + 128 121596155 - Ajs_3868 - hypothetical protein 3720 72.39 +1 4110484..4110972 - 162 121596156 - Ajs_3869 - UspA domain-containing protein 3721 66.67 0 4111075..4112247 + 390 121596157 - Ajs_3870 - queuine tRNA-ribosyltransferase 3722 73.04 +1 4112327..4112938 + 203 121596158 - Ajs_3871 - hypothetical protein 3723 72.01 +1 4113074..4114234 - 386 121596159 - Ajs_3872 - hypothetical protein 3724 73.91 +1 4114313..4115113 - 266 121596160 - Ajs_3873 - hypothetical protein 3725 75.60 +1 4115116..4115574 - 152 121596161 - Ajs_3874 - hypothetical protein 3726 68.64 0 4115598..4116206 - 202 121596162 - Ajs_3875 - hypothetical protein 3727 64.06 0 4116209..4116784 - 191 121596163 - Ajs_3876 - AsnC family transcriptional regulator 3728 66.95 0 4116805..4117875 + 356 121596164 - Ajs_3877 - 1-aminocyclopropane-1-carboxylate deaminase 3729 68.35 0 4117915..4119870 - 651 121596165 - Ajs_3878 - phospholipid/glycerol acyltransferase 3730 68.28 0 4120005..4120748 + 247 121596166 - Ajs_3879 - XRE family transcriptional regulator 3731 70.75 0 4120767..4121207 - 146 121596167 - Ajs_3880 - alcohol dehydrogenase 3732 69.36 0 4121233..4121640 - 135 121596168 - Ajs_3881 - hypothetical protein 3733 72.18 +1 4122003..4122419 + 138 121596169 - Ajs_3882 - hypothetical protein 3734 67.88 0 4122586..4123572 + 328 121596170 - Ajs_3883 - hypothetical protein 3735 72.89 +1 4123605..4125083 + 492 121596171 - Ajs_3884 - FAD dependent oxidoreductase 3736 74.86 +1 4125080..4126189 + 369 121596172 - Ajs_3885 - uncharacterized peroxidase-related enzyme 3737 71.78 +1 4126566..4127876 + 436 121596173 - Ajs_3886 - D-amino-acid dehydrogenase 3738 72.59 +1 4127948..4129213 - 421 121596174 - Ajs_3887 - hypothetical protein 3739 71.71 +1 4129254..4130225 - 323 121596175 - Ajs_3888 - hypothetical protein 3740 65.00 0 4130446..4130865 + 139 121596176 - Ajs_3889 - histone family protein DNA-binding protein 3741 67.07 0 4130951..4131703 - 250 121596177 - Ajs_3890 - protein tyrosine/serine phosphatase 3742 61.66 -1 4132165..4132863 - 232 121596178 - Ajs_3891 - two component Fis family transcriptional regulator 3743 68.68 0 4132900..4135188 - 762 121596179 - Ajs_3892 - multi-sensor signal transduction histidine kinase 3744 65.33 0 4135185..4135856 - 223 121596180 - Ajs_3893 - hypothetical protein 3745 70.16 0 4135807..4137180 - 457 121596181 - Ajs_3894 - sun protein 3746 70.47 0 4137177..4137755 - 192 121596182 - Ajs_3895 - hypothetical protein 3747 64.96 0 4137896..4142125 - 1409 121596183 - Ajs_3896 - DNA-directed RNA polymerase subunit beta' 3748 63.88 0 4142256..4146380 - 1374 121596184 - Ajs_3897 - DNA-directed RNA polymerase, beta subunit 3749 61.42 -1 4146654..4147034 - 126 121596185 - Ajs_3898 - 50S ribosomal protein L12P 3750 60.75 -1 4147084..4147590 - 168 121596186 - Ajs_3899 - 50S ribosomal protein L10P 3751 63.22 0 4147834..4148529 - 231 121596187 rplA Ajs_3900 - 50S ribosomal protein L1 3752 57.87 -1 4148530..4148961 - 143 121596188 - Ajs_3901 - 50S ribosomal protein L11P 66.47 MEAN 4.71 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0