version 1.0
Acidovorax sp. JS42, complete genome - 1..4448856 4007 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3587 68.45 0 3955466..3956701 - 411 121596023 - Ajs_3734 - L-carnitine dehydratase/bile acid-inducible protein F 3588 72.32 +1 3956737..3957567 - 276 121596024 - Ajs_3735 - enoyl-CoA hydratase 3589 69.94 0 3957677..3958807 - 376 121596025 - Ajs_3736 - acyl-CoA dehydrogenase domain-containing protein 3590 64.03 0 3958833..3960044 - 403 121596026 - Ajs_3737 - acyl-CoA dehydrogenase domain-containing protein 3591 70.08 0 3960055..3961254 - 399 121596027 - Ajs_3738 - acetyl-CoA acetyltransferases 3592 70.40 0 3961397..3963514 - 705 121596028 - Ajs_3739 - 3-hydroxyacyl-CoA dehydrogenase, NAD-binding 3593 68.48 0 3963647..3964585 + 312 121596029 - Ajs_3740 - LysR family transcriptional regulator 3594 73.55 +1 3964599..3964961 - 120 121596030 - Ajs_3741 - hypothetical protein 3595 65.19 0 3965056..3965934 - 292 121596031 - Ajs_3742 - heat shock protein HtpX 3596 68.48 0 3966062..3966835 - 257 121596032 - Ajs_3743 - putative transmembrane protein 3597 69.56 0 3966832..3967695 - 287 121596033 - Ajs_3744 - hypothetical protein 3598 68.87 0 3967730..3968773 - 347 121596034 - Ajs_3745 - dihydroorotase 3599 66.31 0 3968912..3969475 - 187 121596035 - Ajs_3746 - hypothetical protein 3600 69.31 0 3969559..3975384 - 1941 121596036 - Ajs_3747 - UvrA family protein 3601 66.22 0 3975543..3976655 + 370 121596037 - Ajs_3748 - extracellular ligand-binding receptor 3602 66.49 0 3976790..3977914 + 374 121596038 - Ajs_3749 - extracellular ligand-binding receptor 3603 58.22 -1 3978001..3978213 - 70 121596039 - Ajs_3750 - hypothetical protein 3604 61.62 -1 3978311..3979321 - 336 121596040 - Ajs_3751 - porin 3605 63.95 0 3979560..3981254 - 564 121596041 - Ajs_3752 - major facilitator superfamily transporter 3606 70.95 0 3981701..3982354 - 217 121596042 - Ajs_3753 - DSBA oxidoreductase 3607 63.16 0 3982351..3982635 - 94 121596043 - Ajs_3754 - hypothetical protein 3608 69.33 0 3982632..3983120 - 162 121596044 - Ajs_3755 - YbaK/prolyl-tRNA synthetase associated region 3609 68.69 0 3983234..3984967 + 577 121596045 - Ajs_3756 - diguanylate cyclase 3610 66.23 0 3984982..3985896 - 304 121596046 - Ajs_3757 - hydroxymethylglutaryl-CoA lyase 3611 68.84 0 3985925..3986845 - 306 121596047 - Ajs_3758 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 3612 68.00 0 3986884..3988902 - 672 121596048 - Ajs_3759 - 3-methylcrotonoyl-CoA carboxylase, alpha subunit 3613 69.72 0 3988903..3989622 - 239 121596049 - Ajs_3760 - putative transmembrane protein 3614 69.09 0 3989629..3990411 - 260 121596050 - Ajs_3761 - enoyl-CoA hydratase 3615 70.00 0 3990408..3990917 - 169 121596051 - Ajs_3762 - DinB family protein 3616 67.23 0 3990928..3992532 - 534 121596052 - Ajs_3763 - propionyl-CoA carboxylase 3617 67.65 0 3992547..3994283 - 578 121596053 - Ajs_3764 - acyl-CoA synthetase 3618 70.26 0 3994429..3995514 + 361 121596054 - Ajs_3765 - AraC family transcriptional regulator 3619 57.70 -1 3995893..3996873 - 326 121596055 - Ajs_3766 - transposase, IS4 family protein 3620 67.56 0 3997634..3998302 + 222 121596056 - Ajs_3767 - glutathione S-transferase domain-containing protein 3621 62.20 0 3998347..3999129 + 260 121596057 - Ajs_3768 - hypothetical protein 3622 70.36 0 3999232..4000938 + 568 121596058 - Ajs_3769 - AMP-dependent synthetase and ligase 3623 64.22 0 4001058..4001753 - 231 121596059 - Ajs_3770 - hypothetical protein 3624 68.06 0 4002057..4002488 - 143 121596060 - Ajs_3771 - hypothetical protein 3625 66.27 0 4002804..4004564 + 586 121596061 - Ajs_3772 - methyl-accepting chemotaxis sensory transducer 3626 70.14 0 4004832..4005494 - 220 121596062 - Ajs_3773 - HAD family hydrolase 3627 67.02 0 4005565..4006695 - 376 121596063 - Ajs_3774 - acyl-CoA dehydrogenase domain-containing protein 3628 71.60 +1 4006745..4007413 - 222 121596064 - Ajs_3775 - short chain dehydrogenase 3629 67.67 0 4007516..4008706 - 396 121596065 - Ajs_3776 - acetyl-CoA acetyltransferases 3630 62.84 0 4008703..4010532 - 609 121596066 aceK Ajs_3777 - bifunctional isocitrate dehydrogenase kinase/phosphatase protein 3631 64.56 0 4010570..4011232 - 220 121596067 - Ajs_3778 - carbonate dehydratase 3632 61.80 0 4011288..4012478 - 396 121596068 - Ajs_3779 - isovaleryl-CoA dehydrogenase 3633 56.93 -2 4012608..4013018 - 136 121596069 - Ajs_3780 - MerR family transcriptional regulator 3634 62.10 0 4013322..4014548 - 408 121596070 - Ajs_3782 - transposase, mutator type 3635 62.98 0 4014781..4015593 + 270 121596071 - Ajs_3784 - integrase catalytic subunit 3636 62.85 0 4021542..4023428 + 628 121596072 - Ajs_3785 - ABC transporter related 3637 66.31 0 4023438..4024550 - 370 121596073 - Ajs_3786 - response regulator receiver modulated CheB methylesterase 3638 63.82 0 4024588..4025325 - 245 121596074 - Ajs_3787 - chemoreceptor glutamine deamidase CheD 3639 65.21 0 4025365..4026258 - 297 121596075 - Ajs_3788 - MCP methyltransferase, CheR-type 3640 62.99 0 4026307..4026795 - 162 121596076 - Ajs_3789 - CheW protein 3641 67.14 0 4026829..4028961 - 710 121596077 - Ajs_3790 - CheA signal transduction histidine kinases 3642 63.09 0 4029013..4029375 - 120 121596078 - Ajs_3791 - response regulator receiver protein 3643 63.98 0 4029444..4029890 - 148 121596079 - Ajs_3792 - hypothetical protein 3644 70.94 0 4030040..4031161 + 373 121596080 - Ajs_3793 - response regulator receiver sensor signal transduction histidine kinase 3645 66.98 0 4031158..4031787 + 209 121596081 - Ajs_3794 - two component LuxR family transcriptional regulator 3646 65.89 0 4031886..4032656 - 256 121596082 - Ajs_3795 - flagellar biosynthetic protein FliR 3647 66.30 0 4032662..4032931 - 89 121596083 - Ajs_3796 - flagellar biosynthetic protein FliQ 3648 67.06 0 4032942..4033697 - 251 121596084 fliP Ajs_3797 - flagellar biosynthesis protein FliP 3649 72.49 +1 4033690..4034067 - 125 121596085 - Ajs_3798 - flagellar biosynthesis protein, FliO 3650 66.22 0 4034060..4034509 - 149 121596086 - Ajs_3799 - flagellar motor switch protein FliN 3651 65.07 0 4034499..4035503 - 334 121596087 - Ajs_3800 - flagellar motor switch protein FliM 3652 67.89 0 4035519..4036091 - 190 121596088 - Ajs_3801 - flagellar basal body-associated protein FliL 3653 77.19 +2 4036309..4037619 - 436 121596089 - Ajs_3802 - flagellar hook-length control protein 3654 70.32 0 4037622..4038086 - 154 121596090 - Ajs_3803 - flagellar export protein FliJ 3655 70.61 0 4038114..4039481 - 455 121596091 - Ajs_3804 - flagellar protein export ATPase FliI 3656 72.11 +1 4039507..4040241 - 244 121596092 - Ajs_3805 - flagellar assembly protein FliH 3657 65.46 0 4040251..4041246 - 331 121596093 - Ajs_3806 - flagellar motor switch protein FliG 3658 69.79 0 4041280..4042974 - 564 121596094 - Ajs_3807 - flagellar M-ring protein FliF 3659 64.74 0 4043147..4043458 + 103 121596095 - Ajs_3808 - flagellar hook-basal body complex subunit FliE 3660 64.33 0 4043640..4043939 - 99 121596096 - Ajs_3809 - flagellar protein FliT 3661 60.33 -1 4043942..4044367 - 141 121596097 - Ajs_3810 - flagellar protein FliS 3662 61.94 0 4044510..4045949 - 479 121596098 - Ajs_3811 - flagellar hook-associated 2 domain-containing protein 3663 60.48 -1 4046143..4046982 - 279 121596099 - Ajs_3812 - flagellin domain-containing protein 3664 60.83 -1 4047244..4048083 - 279 121596100 - Ajs_3813 - flagellin domain-containing protein 3665 61.29 -1 4048345..4049181 - 278 121596101 - Ajs_3814 - flagellin domain-containing protein 3666 65.39 0 4049628..4050488 + 286 121596102 - Ajs_3815 - MotA/TolQ/ExbB proton channel 3667 64.76 0 4050515..4051456 + 313 121596103 - Ajs_3816 - OmpA/MotB domain-containing protein 3668 60.72 -1 4051518..4051904 + 128 121596104 - Ajs_3817 - response regulator receiver protein 3669 68.73 0 4051907..4052536 + 209 121596105 - Ajs_3818 - chemotaxis phosphatase, CheZ 3670 68.54 0 4052759..4053931 + 390 121596106 - Ajs_3819 - type III secretion exporter 3671 68.06 0 4053928..4056012 + 694 121596107 - Ajs_3820 - flagellar biosynthesis protein FlhA 3672 70.94 0 4056009..4057601 + 530 121596108 - Ajs_3821 - GTP-binding signal recognition particle 3673 72.68 +1 4057591..4058388 + 265 121596109 - Ajs_3822 - hypothetical protein 3674 66.81 0 4058393..4059106 + 237 121596110 - Ajs_3823 - FliA/WhiG family RNA polymerase sigma factor 3675 69.47 0 4059318..4059674 - 118 121596111 - Ajs_3824 - hypothetical protein 3676 68.52 0 4059722..4060045 - 107 121596112 - Ajs_3825 - anti-sigma-28 factor, FlgM 3677 70.12 0 4060139..4060891 - 250 121596113 - Ajs_3826 - SAF domain-containing protein 3678 66.89 0 4061078..4061533 + 151 121596114 - Ajs_3827 - flagellar basal-body rod protein FlgB 3679 65.93 0 4061555..4061959 + 134 121596115 - Ajs_3828 - flagellar basal-body rod protein FlgC 3680 66.67 0 4061981..4062631 + 216 121596116 - Ajs_3829 - flagellar hook capping protein 3681 64.56 0 4062660..4064276 + 538 121596117 - Ajs_3830 - hypothetical protein 3682 70.99 0 4064303..4065043 + 246 121596118 - Ajs_3831 - flagellar basal-body rod protein FlgF 3683 65.77 0 4065062..4065844 + 260 121596119 - Ajs_3832 - flagellar basal-body rod protein FlgG 3684 69.60 0 4065868..4066584 + 238 121596120 - Ajs_3833 - flagellar L-ring protein 3685 73.19 +1 4066585..4067565 + 326 121596121 - Ajs_3834 - hypothetical protein 3686 71.11 0 4067743..4068867 + 374 121596122 flgI Ajs_3835 - flagellar basal body P-ring protein 66.47 MEAN 4.71 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0