version 1.0
Acidovorax sp. JS42, complete genome - 1..4448856 4007 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3539 61.89 0 3900068..3901177 - 369 121595975 - Ajs_3684 - cobalamin synthesis protein, P47K 3540 67.42 0 3901285..3902472 - 395 121595976 - Ajs_3685 - SAM-dependent methyltransferase 3541 74.90 +1 3902564..3903535 - 323 121595977 - Ajs_3686 - tyrosine recombinase XerC 3542 69.70 0 3903635..3904327 - 230 121595978 - Ajs_3687 - hypothetical protein 3543 68.67 0 3904324..3905271 - 315 121595979 - Ajs_3688 - diaminopimelate epimerase 3544 68.86 0 3905322..3905594 + 90 121595980 - Ajs_3689 - hypothetical protein 3545 69.15 0 3905677..3905877 + 66 121595981 - Ajs_3690 - hypothetical protein 3546 72.35 +1 3905912..3907618 + 568 121595982 - Ajs_3691 - beta-lactamase domain-containing protein 3547 70.66 0 3907611..3908411 + 266 121595983 - Ajs_3692 - RNA-binding S4 domain-containing protein 3548 68.67 0 3908593..3910386 + 597 121595984 - Ajs_3693 - YhhN family protein 3549 68.53 0 3910391..3911461 - 356 121595985 ruvB Ajs_3694 - Holliday junction DNA helicase B 3550 71.36 +1 3911686..3912324 + 212 121595986 - Ajs_3695 - hypothetical protein 3551 71.95 +1 3912333..3914243 + 636 121595987 - Ajs_3696 - putative heat-shock chaperone protein 3552 71.38 +1 3914254..3914847 + 197 121595988 - Ajs_3697 - NAD(P)H dehydrogenase (quinone) 3553 72.80 +1 3914852..3917722 + 956 121595989 - Ajs_3698 - DnaK-related protein 3554 70.52 0 3917987..3919438 - 483 121595990 - Ajs_3699 - endoproteinase Arg-C 3555 66.14 0 3919477..3920049 - 190 121595991 - Ajs_3700 - Holliday junction DNA helicase RuvA 3556 67.56 0 3920052..3921059 + 335 121595992 - Ajs_3701 - PhoH family protein 3557 67.10 0 3921125..3921583 + 152 121595993 - Ajs_3702 - hypothetical protein 3558 63.27 0 3921809..3922897 + 362 121595994 - Ajs_3703 - transposase, IS4 family protein 3559 70.14 0 3923067..3923843 + 258 121595995 - Ajs_3704 - hypothetical protein 3560 65.74 0 3923870..3925279 - 469 121595996 - Ajs_3705 - DEAD/DEAH box helicase domain-containing protein 3561 71.61 +1 3925289..3925753 - 154 121595997 - Ajs_3706 - D-tyrosyl-tRNA deacylase 3562 69.90 0 3925750..3926709 - 319 121595998 - Ajs_3707 - cation diffusion facilitator family transporter 3563 68.88 0 3926730..3928943 + 737 121595999 - Ajs_3708 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 3564 68.22 0 3929005..3930486 + 493 121596000 - Ajs_3709 - AMP nucleosidase 3565 74.44 +1 3930559..3931818 - 419 121596001 - Ajs_3710 - hypothetical protein 3566 71.30 +1 3931958..3932929 + 323 121596002 - Ajs_3711 - ABC transporter related 3567 65.80 0 3932931..3933740 + 269 121596003 - Ajs_3712 - ABC transporter 3568 68.23 0 3934234..3935580 + 448 121596004 - Ajs_3714 - putative GAF sensor protein 3569 67.82 0 3935601..3936032 - 143 121596005 - Ajs_3715 - hypothetical protein 3570 65.42 0 3936029..3936748 - 239 121596006 - Ajs_3716 - hypothetical protein 3571 70.05 0 3936924..3938519 - 531 121596007 - Ajs_3717 - glucose-methanol-choline oxidoreductase 3572 64.19 0 3938632..3939480 + 282 121596008 - Ajs_3718 - 3-hydroxybutyryl-CoA dehydrogenase 3573 71.97 +1 3939501..3940292 + 263 121596009 - Ajs_3719 - 2-dehydro-3-deoxyglucarate aldolase 3574 67.78 0 3940759..3942018 + 419 121596010 - Ajs_3720 - hypothetical protein 3575 73.46 +1 3942068..3943201 + 377 121596011 - Ajs_3721 - peptidase M48, Ste24p 3576 63.16 0 3943658..3943828 - 56 121596012 - Ajs_3722 - hypothetical protein 3577 68.95 0 3944072..3944989 + 305 121596013 - Ajs_3723 - cysteine synthase 3578 67.98 0 3945126..3945965 + 279 121596014 - Ajs_3724 - endonuclease/exonuclease/phosphatase 3579 69.54 0 3945965..3947182 + 405 121596015 - Ajs_3725 - cardiolipin synthase 2 3580 71.54 +1 3947191..3948258 + 355 121596016 - Ajs_3726 - hypothetical protein 3581 72.33 +1 3948345..3950126 + 593 121596017 - Ajs_3727 - FAD dependent oxidoreductase 3582 68.90 0 3950138..3950764 - 208 121596018 - Ajs_3728 - hypothetical protein 3583 68.70 0 3951689..3952621 - 310 121596019 - Ajs_3730 - electron transfer flavoprotein, alpha subunit 3584 63.87 0 3952643..3953392 - 249 121596020 - Ajs_3731 - electron transfer flavoprotein beta-subunit 3585 66.46 0 3953414..3954388 - 324 121596021 - Ajs_3732 - 2-nitropropane dioxygenase, NPD 3586 68.37 0 3954400..3955395 - 331 121596022 - Ajs_3733 - hypothetical protein 3587 68.45 0 3955466..3956701 - 411 121596023 - Ajs_3734 - L-carnitine dehydratase/bile acid-inducible protein F 3588 72.32 +1 3956737..3957567 - 276 121596024 - Ajs_3735 - enoyl-CoA hydratase 3589 69.94 0 3957677..3958807 - 376 121596025 - Ajs_3736 - acyl-CoA dehydrogenase domain-containing protein 3590 64.03 0 3958833..3960044 - 403 121596026 - Ajs_3737 - acyl-CoA dehydrogenase domain-containing protein 3591 70.08 0 3960055..3961254 - 399 121596027 - Ajs_3738 - acetyl-CoA acetyltransferases 3592 70.40 0 3961397..3963514 - 705 121596028 - Ajs_3739 - 3-hydroxyacyl-CoA dehydrogenase, NAD-binding 3593 68.48 0 3963647..3964585 + 312 121596029 - Ajs_3740 - LysR family transcriptional regulator 3594 73.55 +1 3964599..3964961 - 120 121596030 - Ajs_3741 - hypothetical protein 3595 65.19 0 3965056..3965934 - 292 121596031 - Ajs_3742 - heat shock protein HtpX 3596 68.48 0 3966062..3966835 - 257 121596032 - Ajs_3743 - putative transmembrane protein 3597 69.56 0 3966832..3967695 - 287 121596033 - Ajs_3744 - hypothetical protein 3598 68.87 0 3967730..3968773 - 347 121596034 - Ajs_3745 - dihydroorotase 3599 66.31 0 3968912..3969475 - 187 121596035 - Ajs_3746 - hypothetical protein 3600 69.31 0 3969559..3975384 - 1941 121596036 - Ajs_3747 - UvrA family protein 3601 66.22 0 3975543..3976655 + 370 121596037 - Ajs_3748 - extracellular ligand-binding receptor 3602 66.49 0 3976790..3977914 + 374 121596038 - Ajs_3749 - extracellular ligand-binding receptor 3603 58.22 -1 3978001..3978213 - 70 121596039 - Ajs_3750 - hypothetical protein 3604 61.62 -1 3978311..3979321 - 336 121596040 - Ajs_3751 - porin 3605 63.95 0 3979560..3981254 - 564 121596041 - Ajs_3752 - major facilitator superfamily transporter 3606 70.95 0 3981701..3982354 - 217 121596042 - Ajs_3753 - DSBA oxidoreductase 3607 63.16 0 3982351..3982635 - 94 121596043 - Ajs_3754 - hypothetical protein 3608 69.33 0 3982632..3983120 - 162 121596044 - Ajs_3755 - YbaK/prolyl-tRNA synthetase associated region 3609 68.69 0 3983234..3984967 + 577 121596045 - Ajs_3756 - diguanylate cyclase 3610 66.23 0 3984982..3985896 - 304 121596046 - Ajs_3757 - hydroxymethylglutaryl-CoA lyase 3611 68.84 0 3985925..3986845 - 306 121596047 - Ajs_3758 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 3612 68.00 0 3986884..3988902 - 672 121596048 - Ajs_3759 - 3-methylcrotonoyl-CoA carboxylase, alpha subunit 3613 69.72 0 3988903..3989622 - 239 121596049 - Ajs_3760 - putative transmembrane protein 3614 69.09 0 3989629..3990411 - 260 121596050 - Ajs_3761 - enoyl-CoA hydratase 3615 70.00 0 3990408..3990917 - 169 121596051 - Ajs_3762 - DinB family protein 3616 67.23 0 3990928..3992532 - 534 121596052 - Ajs_3763 - propionyl-CoA carboxylase 3617 67.65 0 3992547..3994283 - 578 121596053 - Ajs_3764 - acyl-CoA synthetase 3618 70.26 0 3994429..3995514 + 361 121596054 - Ajs_3765 - AraC family transcriptional regulator 3619 57.70 -1 3995893..3996873 - 326 121596055 - Ajs_3766 - transposase, IS4 family protein 3620 67.56 0 3997634..3998302 + 222 121596056 - Ajs_3767 - glutathione S-transferase domain-containing protein 3621 62.20 0 3998347..3999129 + 260 121596057 - Ajs_3768 - hypothetical protein 3622 70.36 0 3999232..4000938 + 568 121596058 - Ajs_3769 - AMP-dependent synthetase and ligase 3623 64.22 0 4001058..4001753 - 231 121596059 - Ajs_3770 - hypothetical protein 3624 68.06 0 4002057..4002488 - 143 121596060 - Ajs_3771 - hypothetical protein 3625 66.27 0 4002804..4004564 + 586 121596061 - Ajs_3772 - methyl-accepting chemotaxis sensory transducer 3626 70.14 0 4004832..4005494 - 220 121596062 - Ajs_3773 - HAD family hydrolase 3627 67.02 0 4005565..4006695 - 376 121596063 - Ajs_3774 - acyl-CoA dehydrogenase domain-containing protein 3628 71.60 +1 4006745..4007413 - 222 121596064 - Ajs_3775 - short chain dehydrogenase 3629 67.67 0 4007516..4008706 - 396 121596065 - Ajs_3776 - acetyl-CoA acetyltransferases 3630 62.84 0 4008703..4010532 - 609 121596066 aceK Ajs_3777 - bifunctional isocitrate dehydrogenase kinase/phosphatase protein 3631 64.56 0 4010570..4011232 - 220 121596067 - Ajs_3778 - carbonate dehydratase 3632 61.80 0 4011288..4012478 - 396 121596068 - Ajs_3779 - isovaleryl-CoA dehydrogenase 3633 56.93 -2 4012608..4013018 - 136 121596069 - Ajs_3780 - MerR family transcriptional regulator 3634 62.10 0 4013322..4014548 - 408 121596070 - Ajs_3782 - transposase, mutator type 3635 62.98 0 4014781..4015593 + 270 121596071 - Ajs_3784 - integrase catalytic subunit 3636 62.85 0 4021542..4023428 + 628 121596072 - Ajs_3785 - ABC transporter related 3637 66.31 0 4023438..4024550 - 370 121596073 - Ajs_3786 - response regulator receiver modulated CheB methylesterase 3638 63.82 0 4024588..4025325 - 245 121596074 - Ajs_3787 - chemoreceptor glutamine deamidase CheD 66.47 MEAN 4.71 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0