version 1.0
Acidovorax sp. JS42, complete genome - 1..4448856 4007 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3505 72.84 +1 3859132..3860685 - 517 121595941 - Ajs_3650 - O-antigen polymerase 3506 71.70 +1 3860734..3861210 - 158 121595942 - Ajs_3651 - cytochrome c, class I 3507 72.07 +1 3861282..3861947 - 221 121595943 - Ajs_3652 - hypothetical protein 3508 72.40 +1 3861975..3862706 - 243 121595944 - Ajs_3653 - ECF subfamily RNA polymerase sigma-24 factor 3509 67.91 0 3862835..3864922 + 695 121595945 - Ajs_3654 - ribonuclease II 3510 68.74 0 3864947..3865861 + 304 121595946 - Ajs_3655 - TonB family protein 3511 73.50 +1 3865861..3866709 + 282 121595947 - Ajs_3656 - shikimate 5-dehydrogenase 3512 70.12 0 3866713..3867435 + 240 121595948 - Ajs_3657 - monofunctional biosynthetic peptidoglycan transglycosylase 3513 71.30 +1 3867515..3868075 + 186 121595949 - Ajs_3658 - crossover junction endodeoxyribonuclease RuvC 3514 69.45 0 3868112..3869764 - 550 121595950 - Ajs_3659 - methyl-accepting chemotaxis sensory transducer 3515 69.37 0 3870019..3871644 + 541 121595951 - Ajs_3660 - methyl-accepting chemotaxis sensory transducer 3516 66.23 0 3871696..3873540 - 614 121595952 - Ajs_3661 - thiamine biosynthesis protein ThiC 3517 56.50 -2 3873785..3873961 - 58 121595953 - Ajs_3662 - hypothetical protein 3518 65.91 0 3873980..3874903 - 307 121595954 lpxC Ajs_3663 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3519 66.17 0 3875067..3876863 + 598 121595955 - Ajs_3664 - methyl-accepting chemotaxis sensory transducer 3520 68.29 0 3877005..3878234 - 409 121595956 - Ajs_3665 - cell division protein FtsZ 3521 66.75 0 3878397..3879626 - 409 121595957 - Ajs_3666 - cell division protein FtsA 3522 69.66 0 3879644..3880477 - 277 121595958 - Ajs_3667 - polypeptide-transport-associated domain-containing protein 3523 67.37 0 3880474..3881472 - 332 121595959 - Ajs_3668 - D-alanine--D-alanine ligase 3524 69.18 0 3881469..3882902 - 477 121595960 murC Ajs_3669 - UDP-N-acetylmuramate--L-alanine ligase 3525 70.42 0 3882899..3884098 - 399 121595961 - Ajs_3670 - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 3526 66.74 0 3884193..3885473 - 426 121595962 - Ajs_3671 - cell division protein FtsW 3527 70.47 0 3885470..3886966 - 498 121595963 murD Ajs_3672 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 3528 63.36 0 3887359..3888537 - 392 121595964 - Ajs_3673 - phospho-N-acetylmuramoyl-pentapeptide-transferase 3529 70.74 0 3888528..3889976 - 482 121595965 - Ajs_3674 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 3530 70.98 0 3889973..3891478 - 501 121595966 - Ajs_3675 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 3531 66.09 0 3891475..3893223 - 582 121595967 - Ajs_3676 - peptidoglycan synthetase FtsI 3532 68.65 0 3893220..3893522 - 100 121595968 - Ajs_3677 - cell division protein FtsL 3533 66.45 0 3893632..3894558 - 308 121595969 - Ajs_3678 - S-adenosyl-methyltransferase MraW 3534 65.50 0 3894568..3894996 - 142 121595970 - Ajs_3679 - cell division protein MraZ 3535 65.92 0 3895262..3896602 - 446 121595971 hslU Ajs_3680 - ATP-dependent protease ATP-binding subunit 3536 66.84 0 3896698..3897279 - 193 121595972 - Ajs_3681 - ATP-dependent protease peptidase subunit 3537 69.43 0 3897337..3899145 - 602 121595973 - Ajs_3682 - hypothetical protein 3538 65.96 0 3899199..3900044 - 281 121595974 - Ajs_3683 - TraR/DksA family transcriptional regulator 3539 61.89 0 3900068..3901177 - 369 121595975 - Ajs_3684 - cobalamin synthesis protein, P47K 3540 67.42 0 3901285..3902472 - 395 121595976 - Ajs_3685 - SAM-dependent methyltransferase 3541 74.90 +1 3902564..3903535 - 323 121595977 - Ajs_3686 - tyrosine recombinase XerC 3542 69.70 0 3903635..3904327 - 230 121595978 - Ajs_3687 - hypothetical protein 3543 68.67 0 3904324..3905271 - 315 121595979 - Ajs_3688 - diaminopimelate epimerase 3544 68.86 0 3905322..3905594 + 90 121595980 - Ajs_3689 - hypothetical protein 3545 69.15 0 3905677..3905877 + 66 121595981 - Ajs_3690 - hypothetical protein 3546 72.35 +1 3905912..3907618 + 568 121595982 - Ajs_3691 - beta-lactamase domain-containing protein 3547 70.66 0 3907611..3908411 + 266 121595983 - Ajs_3692 - RNA-binding S4 domain-containing protein 3548 68.67 0 3908593..3910386 + 597 121595984 - Ajs_3693 - YhhN family protein 3549 68.53 0 3910391..3911461 - 356 121595985 ruvB Ajs_3694 - Holliday junction DNA helicase B 3550 71.36 +1 3911686..3912324 + 212 121595986 - Ajs_3695 - hypothetical protein 3551 71.95 +1 3912333..3914243 + 636 121595987 - Ajs_3696 - putative heat-shock chaperone protein 3552 71.38 +1 3914254..3914847 + 197 121595988 - Ajs_3697 - NAD(P)H dehydrogenase (quinone) 3553 72.80 +1 3914852..3917722 + 956 121595989 - Ajs_3698 - DnaK-related protein 3554 70.52 0 3917987..3919438 - 483 121595990 - Ajs_3699 - endoproteinase Arg-C 3555 66.14 0 3919477..3920049 - 190 121595991 - Ajs_3700 - Holliday junction DNA helicase RuvA 3556 67.56 0 3920052..3921059 + 335 121595992 - Ajs_3701 - PhoH family protein 3557 67.10 0 3921125..3921583 + 152 121595993 - Ajs_3702 - hypothetical protein 3558 63.27 0 3921809..3922897 + 362 121595994 - Ajs_3703 - transposase, IS4 family protein 3559 70.14 0 3923067..3923843 + 258 121595995 - Ajs_3704 - hypothetical protein 3560 65.74 0 3923870..3925279 - 469 121595996 - Ajs_3705 - DEAD/DEAH box helicase domain-containing protein 3561 71.61 +1 3925289..3925753 - 154 121595997 - Ajs_3706 - D-tyrosyl-tRNA deacylase 3562 69.90 0 3925750..3926709 - 319 121595998 - Ajs_3707 - cation diffusion facilitator family transporter 3563 68.88 0 3926730..3928943 + 737 121595999 - Ajs_3708 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 3564 68.22 0 3929005..3930486 + 493 121596000 - Ajs_3709 - AMP nucleosidase 3565 74.44 +1 3930559..3931818 - 419 121596001 - Ajs_3710 - hypothetical protein 3566 71.30 +1 3931958..3932929 + 323 121596002 - Ajs_3711 - ABC transporter related 3567 65.80 0 3932931..3933740 + 269 121596003 - Ajs_3712 - ABC transporter 3568 68.23 0 3934234..3935580 + 448 121596004 - Ajs_3714 - putative GAF sensor protein 3569 67.82 0 3935601..3936032 - 143 121596005 - Ajs_3715 - hypothetical protein 3570 65.42 0 3936029..3936748 - 239 121596006 - Ajs_3716 - hypothetical protein 3571 70.05 0 3936924..3938519 - 531 121596007 - Ajs_3717 - glucose-methanol-choline oxidoreductase 3572 64.19 0 3938632..3939480 + 282 121596008 - Ajs_3718 - 3-hydroxybutyryl-CoA dehydrogenase 3573 71.97 +1 3939501..3940292 + 263 121596009 - Ajs_3719 - 2-dehydro-3-deoxyglucarate aldolase 3574 67.78 0 3940759..3942018 + 419 121596010 - Ajs_3720 - hypothetical protein 3575 73.46 +1 3942068..3943201 + 377 121596011 - Ajs_3721 - peptidase M48, Ste24p 3576 63.16 0 3943658..3943828 - 56 121596012 - Ajs_3722 - hypothetical protein 3577 68.95 0 3944072..3944989 + 305 121596013 - Ajs_3723 - cysteine synthase 3578 67.98 0 3945126..3945965 + 279 121596014 - Ajs_3724 - endonuclease/exonuclease/phosphatase 3579 69.54 0 3945965..3947182 + 405 121596015 - Ajs_3725 - cardiolipin synthase 2 3580 71.54 +1 3947191..3948258 + 355 121596016 - Ajs_3726 - hypothetical protein 3581 72.33 +1 3948345..3950126 + 593 121596017 - Ajs_3727 - FAD dependent oxidoreductase 3582 68.90 0 3950138..3950764 - 208 121596018 - Ajs_3728 - hypothetical protein 3583 68.70 0 3951689..3952621 - 310 121596019 - Ajs_3730 - electron transfer flavoprotein, alpha subunit 3584 63.87 0 3952643..3953392 - 249 121596020 - Ajs_3731 - electron transfer flavoprotein beta-subunit 3585 66.46 0 3953414..3954388 - 324 121596021 - Ajs_3732 - 2-nitropropane dioxygenase, NPD 3586 68.37 0 3954400..3955395 - 331 121596022 - Ajs_3733 - hypothetical protein 3587 68.45 0 3955466..3956701 - 411 121596023 - Ajs_3734 - L-carnitine dehydratase/bile acid-inducible protein F 3588 72.32 +1 3956737..3957567 - 276 121596024 - Ajs_3735 - enoyl-CoA hydratase 3589 69.94 0 3957677..3958807 - 376 121596025 - Ajs_3736 - acyl-CoA dehydrogenase domain-containing protein 3590 64.03 0 3958833..3960044 - 403 121596026 - Ajs_3737 - acyl-CoA dehydrogenase domain-containing protein 3591 70.08 0 3960055..3961254 - 399 121596027 - Ajs_3738 - acetyl-CoA acetyltransferases 3592 70.40 0 3961397..3963514 - 705 121596028 - Ajs_3739 - 3-hydroxyacyl-CoA dehydrogenase, NAD-binding 3593 68.48 0 3963647..3964585 + 312 121596029 - Ajs_3740 - LysR family transcriptional regulator 3594 73.55 +1 3964599..3964961 - 120 121596030 - Ajs_3741 - hypothetical protein 3595 65.19 0 3965056..3965934 - 292 121596031 - Ajs_3742 - heat shock protein HtpX 3596 68.48 0 3966062..3966835 - 257 121596032 - Ajs_3743 - putative transmembrane protein 3597 69.56 0 3966832..3967695 - 287 121596033 - Ajs_3744 - hypothetical protein 3598 68.87 0 3967730..3968773 - 347 121596034 - Ajs_3745 - dihydroorotase 3599 66.31 0 3968912..3969475 - 187 121596035 - Ajs_3746 - hypothetical protein 3600 69.31 0 3969559..3975384 - 1941 121596036 - Ajs_3747 - UvrA family protein 3601 66.22 0 3975543..3976655 + 370 121596037 - Ajs_3748 - extracellular ligand-binding receptor 3602 66.49 0 3976790..3977914 + 374 121596038 - Ajs_3749 - extracellular ligand-binding receptor 3603 58.22 -1 3978001..3978213 - 70 121596039 - Ajs_3750 - hypothetical protein 3604 61.62 -1 3978311..3979321 - 336 121596040 - Ajs_3751 - porin 66.47 MEAN 4.71 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0