version 1.0
Acidovorax sp. JS42, complete genome - 1..4448856 4007 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3430 66.17 0 3766565..3772645 - 2026 121595866 - Ajs_3574 - CheA signal transduction histidine kinases 3431 64.72 0 3772692..3774956 - 754 121595867 - Ajs_3575 - methyl-accepting chemotaxis sensory transducer 3432 65.15 0 3774978..3775505 - 175 121595868 - Ajs_3576 - putative CheW protein 3433 57.92 -1 3775522..3775887 - 121 121595869 - Ajs_3577 - response regulator receiver protein 3434 53.44 -2 3775899..3776291 - 130 121595870 - Ajs_3578 - response regulator receiver protein 3435 58.17 -1 3776343..3776495 - 50 121595871 - Ajs_3579 - rubredoxin-type Fe(Cys)4 protein 3436 64.87 0 3776611..3777555 + 314 121595872 - Ajs_3580 - phosphomethylpyrimidine kinase type-1 3437 68.58 0 3777539..3778843 + 434 121595873 - Ajs_3581 - glutamate-1-semialdehyde 2,1-aminomutase 3438 69.85 0 3778933..3780786 + 617 121595874 - Ajs_3582 - alkaline phosphatase 3439 74.24 +1 3780880..3781341 - 153 121595875 - Ajs_3583 - cytochrome c, class I 3440 67.73 0 3781361..3782962 - 533 121595876 - Ajs_3584 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3441 63.25 0 3783045..3783278 - 77 121595877 - Ajs_3585 - DNA-binding protein Fis 3442 70.24 0 3783259..3784320 - 353 121595878 - Ajs_3586 - nifR3 family TIM-barrel protein 3443 70.28 0 3784415..3785023 + 202 121595879 - Ajs_3587 - hypothetical protein 3444 63.78 0 3785361..3786536 - 391 121595880 - Ajs_3588 - HipA domain-containing protein 3445 60.90 -1 3786581..3786892 - 103 121595881 - Ajs_3589 - helix-turn-helix domain-containing protein 3446 60.00 -1 3787037..3787276 - 79 121595882 - Ajs_3590 - XRE family transcriptional regulator 3447 62.16 0 3787420..3788085 + 221 121595883 - Ajs_3591 - hypothetical protein 3448 59.12 -1 3788103..3788831 + 242 121595884 - Ajs_3592 - hypothetical protein 3449 69.51 0 3788896..3789633 - 245 121595885 - Ajs_3593 - IstB ATP binding domain-containing protein 3450 68.74 0 3789670..3791214 - 514 121595886 - Ajs_3594 - integrase catalytic subunit 3451 60.92 -1 3791300..3791821 + 173 121595887 - Ajs_3595 - hypothetical protein 3452 62.05 0 3791818..3792294 + 158 121595888 - Ajs_3596 - hypothetical protein 3453 61.35 -1 3792281..3792562 + 93 121595889 - Ajs_3597 - hypothetical protein 3454 62.16 0 3792543..3794117 - 524 121595890 - Ajs_3598 - ATPase central domain-containing protein 3455 61.34 -1 3794943..3795806 - 287 121595891 - Ajs_3599 - hypothetical protein 3456 62.06 0 3795809..3798562 - 917 121595892 - Ajs_3600 - hypothetical protein 3457 63.25 0 3798562..3799176 - 204 121595893 - Ajs_3601 - hypothetical protein 3458 62.70 0 3799173..3800432 - 419 121595894 - Ajs_3602 - hypothetical protein 3459 60.07 -1 3800846..3802558 - 570 121595895 - Ajs_3603 - hypothetical protein 3460 62.33 0 3802582..3803850 - 422 121595896 - Ajs_3604 - putative transcriptional regulator 3461 61.75 -1 3803852..3806719 - 955 121595897 - Ajs_3605 - SMC domain-containing protein 3462 60.77 -1 3806730..3809732 - 1000 121595898 - Ajs_3606 - HsdR family type I site-specific deoxyribonuclease 3463 53.99 -2 3809732..3810922 - 396 121595899 - Ajs_3607 - restriction modification system, type I 3464 60.63 -1 3810915..3812801 - 628 121595900 - Ajs_3608 - putative transcriptional regulator 3465 62.34 0 3812794..3814320 - 508 121595901 - Ajs_3609 - N-6 DNA methylase 3466 61.34 -1 3814317..3815819 - 500 121595902 - Ajs_3610 - N-6 DNA methylase 3467 61.11 -1 3815816..3816013 - 65 121595903 - Ajs_3611 - hypothetical protein 3468 61.42 -1 3816001..3816267 - 88 121595904 - Ajs_3612 - hypothetical protein 3469 63.27 0 3816280..3817368 - 362 121595905 - Ajs_3613 - transposase, IS4 family protein 3470 63.76 0 3817399..3818466 - 355 121595906 - Ajs_3614 - phage integrase family protein 3471 60.69 -1 3818463..3819365 - 300 121595907 - Ajs_3615 - hypothetical protein 3472 51.58 -2 3819720..3820508 - 262 121595908 - Ajs_3616 - hypothetical protein 3473 59.93 -1 3820505..3821677 - 390 121595909 - Ajs_3617 - phage integrase family protein 3474 65.57 0 3821896..3822990 - 364 121595910 - Ajs_3618 - GTP-binding protein YchF 3475 70.57 0 3823115..3823984 - 289 121595911 - Ajs_3619 - MOSC domain-containing protein 3476 75.00 +1 3824086..3825225 + 379 121595912 - Ajs_3620 - 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 3477 66.67 0 3825269..3825979 + 236 121595913 - Ajs_3621 - thiol:disulfide interchange protein DsbC 3478 70.88 0 3826146..3827927 + 593 121595914 - Ajs_3622 - peptidase M61 domain-containing protein 3479 64.51 0 3827924..3828757 + 277 121595915 - Ajs_3623 - short chain enoyl-CoA hydratase 3480 70.15 0 3828954..3829412 + 152 121595916 - Ajs_3624 - hypothetical protein 3481 64.59 0 3829550..3830896 + 448 121595917 - Ajs_3625 - tRNA-i(6)A37 thiotransferase enzyme MiaB 3482 66.52 0 3831018..3832397 - 459 121595918 - Ajs_3626 - signal recognition particle subunit FFH/SRP54 (srp54) 3483 70.29 0 3832489..3833289 + 266 121595919 - Ajs_3627 - cytochrome c assembly protein 3484 69.26 0 3833286..3833516 + 76 121595920 - Ajs_3628 - hypothetical protein 3485 67.25 0 3833521..3835221 + 566 121595921 - Ajs_3629 - integral membrane sensor signal transduction histidine kinase 3486 67.20 0 3835237..3836745 + 502 121595922 - Ajs_3630 - two component, sigma54 specific, Fis family transcriptional regulator 3487 65.67 0 3836726..3837325 + 199 121595923 - Ajs_3631 - N-acetyl-anhydromuranmyl-L-alanine amidase 3488 62.45 0 3837681..3840599 + 972 121595924 - Ajs_3632 - ribonucleotide-diphosphate reductase subunit alpha 3489 58.94 -1 3840738..3841928 + 396 121595925 - Ajs_3633 - ribonucleotide-diphosphate reductase subunit beta 3490 62.03 0 3842109..3842690 + 193 121595926 - Ajs_3634 - histone protein 3491 62.21 0 3842788..3843684 - 298 121595927 - Ajs_3635 - ribokinase-like domain-containing protein 3492 65.77 0 3843710..3845047 - 445 121595928 - Ajs_3636 - Zinc finger-domain-containing protein 3493 66.22 0 3845097..3845990 - 297 121595929 - Ajs_3637 - 50S ribosomal protein L11P methyltransferase 3494 63.04 0 3846076..3847425 - 449 121595930 - Ajs_3638 - acetyl-CoA carboxylase, biotin carboxylase 3495 64.09 0 3847539..3848003 - 154 121595931 - Ajs_3639 - biotin carboxyl carrier protein 3496 66.50 0 3848114..3848701 - 195 121595932 - Ajs_3640 - redoxin domain-containing protein 3497 66.01 0 3848698..3849309 - 203 121595933 - Ajs_3641 - hypothetical protein 3498 69.33 0 3849526..3850950 + 474 121595934 - Ajs_3642 - UDP-N-acetylmuramate 3499 67.95 0 3850999..3851310 - 103 121595935 - Ajs_3643 - hypothetical protein 3500 66.13 0 3851405..3852523 - 372 121595936 - Ajs_3644 - phospho-2-dehydro-3-deoxyheptonate aldolase 3501 71.58 +1 3852777..3853325 - 182 121595937 - Ajs_3645 - hypothetical protein 3502 67.42 0 3853348..3854808 - 486 121595938 - Ajs_3646 - microcin-processing peptidase 2 3503 67.01 0 3854870..3856042 - 390 121595939 - Ajs_3647 - rod shape-determining protein RodA 3504 72.28 +1 3858544..3859131 + 195 121595940 - Ajs_3649 - hypothetical protein 3505 72.84 +1 3859132..3860685 - 517 121595941 - Ajs_3650 - O-antigen polymerase 3506 71.70 +1 3860734..3861210 - 158 121595942 - Ajs_3651 - cytochrome c, class I 3507 72.07 +1 3861282..3861947 - 221 121595943 - Ajs_3652 - hypothetical protein 3508 72.40 +1 3861975..3862706 - 243 121595944 - Ajs_3653 - ECF subfamily RNA polymerase sigma-24 factor 3509 67.91 0 3862835..3864922 + 695 121595945 - Ajs_3654 - ribonuclease II 3510 68.74 0 3864947..3865861 + 304 121595946 - Ajs_3655 - TonB family protein 3511 73.50 +1 3865861..3866709 + 282 121595947 - Ajs_3656 - shikimate 5-dehydrogenase 3512 70.12 0 3866713..3867435 + 240 121595948 - Ajs_3657 - monofunctional biosynthetic peptidoglycan transglycosylase 3513 71.30 +1 3867515..3868075 + 186 121595949 - Ajs_3658 - crossover junction endodeoxyribonuclease RuvC 3514 69.45 0 3868112..3869764 - 550 121595950 - Ajs_3659 - methyl-accepting chemotaxis sensory transducer 3515 69.37 0 3870019..3871644 + 541 121595951 - Ajs_3660 - methyl-accepting chemotaxis sensory transducer 3516 66.23 0 3871696..3873540 - 614 121595952 - Ajs_3661 - thiamine biosynthesis protein ThiC 3517 56.50 -2 3873785..3873961 - 58 121595953 - Ajs_3662 - hypothetical protein 3518 65.91 0 3873980..3874903 - 307 121595954 lpxC Ajs_3663 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3519 66.17 0 3875067..3876863 + 598 121595955 - Ajs_3664 - methyl-accepting chemotaxis sensory transducer 3520 68.29 0 3877005..3878234 - 409 121595956 - Ajs_3665 - cell division protein FtsZ 3521 66.75 0 3878397..3879626 - 409 121595957 - Ajs_3666 - cell division protein FtsA 3522 69.66 0 3879644..3880477 - 277 121595958 - Ajs_3667 - polypeptide-transport-associated domain-containing protein 3523 67.37 0 3880474..3881472 - 332 121595959 - Ajs_3668 - D-alanine--D-alanine ligase 3524 69.18 0 3881469..3882902 - 477 121595960 murC Ajs_3669 - UDP-N-acetylmuramate--L-alanine ligase 3525 70.42 0 3882899..3884098 - 399 121595961 - Ajs_3670 - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 3526 66.74 0 3884193..3885473 - 426 121595962 - Ajs_3671 - cell division protein FtsW 3527 70.47 0 3885470..3886966 - 498 121595963 murD Ajs_3672 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 3528 63.36 0 3887359..3888537 - 392 121595964 - Ajs_3673 - phospho-N-acetylmuramoyl-pentapeptide-transferase 3529 70.74 0 3888528..3889976 - 482 121595965 - Ajs_3674 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 66.47 MEAN 4.71 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0