version 1.0
Acidovorax sp. JS42, complete genome - 1..4448856 4007 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3399 69.68 0 3732526..3732990 - 154 121595835 - Ajs_3542 - dehydratase 3400 70.53 0 3733073..3733693 - 206 121595836 - Ajs_3543 - cobyrinic acid a,c-diamide synthase 3401 68.23 0 3733841..3734479 - 212 121595837 - Ajs_3544 - lysine exporter protein LysE/YggA 3402 68.90 0 3734767..3736734 + 655 121595838 - Ajs_3545 - potassium efflux system protein 3403 67.67 0 3736759..3737751 - 330 121595839 - Ajs_3546 - hypothetical protein 3404 71.54 +1 3737840..3738640 - 266 121595840 - Ajs_3547 - 3-oxoadipate enol-lactonase 3405 70.63 0 3738668..3739879 - 403 121595841 - Ajs_3548 - beta-ketoadipyl CoA thiolase 3406 67.43 0 3739955..3740608 - 217 121595842 - Ajs_3549 - butyryl-CoA:acetate CoA transferase 3407 66.38 0 3740636..3741331 - 231 121595843 - Ajs_3550 - 3-oxoacid CoA-transferase, A subunit 3408 68.03 0 3741447..3742250 + 267 121595844 - Ajs_3551 - IclR family transcriptional regulator 3409 68.64 0 3742668..3743123 + 151 121595845 - Ajs_3553 - hypothetical protein 3410 71.65 +1 3743084..3743986 - 300 121595846 - Ajs_3554 - UspA domain-containing protein 3411 63.18 0 3744447..3745106 - 219 121595847 - Ajs_3555 - cytochrome c, class I 3412 61.92 0 3745215..3746057 + 280 121595848 - Ajs_3556 - ATPase central domain-containing protein 3413 69.30 0 3746071..3746298 + 75 121595849 - Ajs_3557 - hypothetical protein 3414 68.66 0 3746316..3746918 + 200 121595850 - Ajs_3558 - GCN5-related N-acetyltransferase 3415 63.22 0 3746937..3748124 + 395 121595851 - Ajs_3559 - hypothetical protein 3416 71.86 +1 3748130..3750034 + 634 121595852 - Ajs_3560 - surface antigen (D15) 3417 76.13 +2 3750142..3754284 + 1380 121595853 - Ajs_3561 - hypothetical protein 3418 73.83 +1 3754493..3754855 - 120 121595854 - Ajs_3562 - hypothetical protein 3419 73.22 +1 3755146..3756549 - 467 121595855 - Ajs_3563 - cardiolipin synthetase 2 3420 71.43 +1 3756880..3757257 - 125 121595856 - Ajs_3564 - arsenate reductase 3421 73.00 +1 3757305..3758963 - 552 121595857 - Ajs_3565 - binding-protein-dependent transport systems inner membrane component 3422 70.19 0 3759183..3760259 + 358 121595858 - Ajs_3566 - ABC transporter related 3423 66.59 0 3760303..3761529 - 408 121595859 - Ajs_3567 - hypothetical protein 3424 71.52 +1 3761660..3762400 - 246 121595860 - Ajs_3568 - lyso-ornithine lipid acyltransferase 3425 71.30 +1 3762420..3763715 - 431 121595861 - Ajs_3569 - dihydroorotase 3426 64.59 0 3763928..3764890 - 320 121595862 pyrB Ajs_3570 - aspartate carbamoyltransferase catalytic subunit 3427 70.60 0 3764893..3765426 - 177 121595863 - Ajs_3571 - phosphoribosyltransferase 3428 69.76 0 3765423..3765842 - 139 121595864 - Ajs_3572 - Holliday junction resolvase YqgF 3429 65.33 0 3765839..3766438 - 199 121595865 - Ajs_3573 - hypothetical protein 3430 66.17 0 3766565..3772645 - 2026 121595866 - Ajs_3574 - CheA signal transduction histidine kinases 3431 64.72 0 3772692..3774956 - 754 121595867 - Ajs_3575 - methyl-accepting chemotaxis sensory transducer 3432 65.15 0 3774978..3775505 - 175 121595868 - Ajs_3576 - putative CheW protein 3433 57.92 -1 3775522..3775887 - 121 121595869 - Ajs_3577 - response regulator receiver protein 3434 53.44 -2 3775899..3776291 - 130 121595870 - Ajs_3578 - response regulator receiver protein 3435 58.17 -1 3776343..3776495 - 50 121595871 - Ajs_3579 - rubredoxin-type Fe(Cys)4 protein 3436 64.87 0 3776611..3777555 + 314 121595872 - Ajs_3580 - phosphomethylpyrimidine kinase type-1 3437 68.58 0 3777539..3778843 + 434 121595873 - Ajs_3581 - glutamate-1-semialdehyde 2,1-aminomutase 3438 69.85 0 3778933..3780786 + 617 121595874 - Ajs_3582 - alkaline phosphatase 3439 74.24 +1 3780880..3781341 - 153 121595875 - Ajs_3583 - cytochrome c, class I 3440 67.73 0 3781361..3782962 - 533 121595876 - Ajs_3584 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3441 63.25 0 3783045..3783278 - 77 121595877 - Ajs_3585 - DNA-binding protein Fis 3442 70.24 0 3783259..3784320 - 353 121595878 - Ajs_3586 - nifR3 family TIM-barrel protein 3443 70.28 0 3784415..3785023 + 202 121595879 - Ajs_3587 - hypothetical protein 3444 63.78 0 3785361..3786536 - 391 121595880 - Ajs_3588 - HipA domain-containing protein 3445 60.90 -1 3786581..3786892 - 103 121595881 - Ajs_3589 - helix-turn-helix domain-containing protein 3446 60.00 -1 3787037..3787276 - 79 121595882 - Ajs_3590 - XRE family transcriptional regulator 3447 62.16 0 3787420..3788085 + 221 121595883 - Ajs_3591 - hypothetical protein 3448 59.12 -1 3788103..3788831 + 242 121595884 - Ajs_3592 - hypothetical protein 3449 69.51 0 3788896..3789633 - 245 121595885 - Ajs_3593 - IstB ATP binding domain-containing protein 3450 68.74 0 3789670..3791214 - 514 121595886 - Ajs_3594 - integrase catalytic subunit 3451 60.92 -1 3791300..3791821 + 173 121595887 - Ajs_3595 - hypothetical protein 3452 62.05 0 3791818..3792294 + 158 121595888 - Ajs_3596 - hypothetical protein 3453 61.35 -1 3792281..3792562 + 93 121595889 - Ajs_3597 - hypothetical protein 3454 62.16 0 3792543..3794117 - 524 121595890 - Ajs_3598 - ATPase central domain-containing protein 3455 61.34 -1 3794943..3795806 - 287 121595891 - Ajs_3599 - hypothetical protein 3456 62.06 0 3795809..3798562 - 917 121595892 - Ajs_3600 - hypothetical protein 3457 63.25 0 3798562..3799176 - 204 121595893 - Ajs_3601 - hypothetical protein 3458 62.70 0 3799173..3800432 - 419 121595894 - Ajs_3602 - hypothetical protein 3459 60.07 -1 3800846..3802558 - 570 121595895 - Ajs_3603 - hypothetical protein 3460 62.33 0 3802582..3803850 - 422 121595896 - Ajs_3604 - putative transcriptional regulator 3461 61.75 -1 3803852..3806719 - 955 121595897 - Ajs_3605 - SMC domain-containing protein 3462 60.77 -1 3806730..3809732 - 1000 121595898 - Ajs_3606 - HsdR family type I site-specific deoxyribonuclease 3463 53.99 -2 3809732..3810922 - 396 121595899 - Ajs_3607 - restriction modification system, type I 3464 60.63 -1 3810915..3812801 - 628 121595900 - Ajs_3608 - putative transcriptional regulator 3465 62.34 0 3812794..3814320 - 508 121595901 - Ajs_3609 - N-6 DNA methylase 3466 61.34 -1 3814317..3815819 - 500 121595902 - Ajs_3610 - N-6 DNA methylase 3467 61.11 -1 3815816..3816013 - 65 121595903 - Ajs_3611 - hypothetical protein 3468 61.42 -1 3816001..3816267 - 88 121595904 - Ajs_3612 - hypothetical protein 3469 63.27 0 3816280..3817368 - 362 121595905 - Ajs_3613 - transposase, IS4 family protein 3470 63.76 0 3817399..3818466 - 355 121595906 - Ajs_3614 - phage integrase family protein 3471 60.69 -1 3818463..3819365 - 300 121595907 - Ajs_3615 - hypothetical protein 3472 51.58 -2 3819720..3820508 - 262 121595908 - Ajs_3616 - hypothetical protein 3473 59.93 -1 3820505..3821677 - 390 121595909 - Ajs_3617 - phage integrase family protein 3474 65.57 0 3821896..3822990 - 364 121595910 - Ajs_3618 - GTP-binding protein YchF 3475 70.57 0 3823115..3823984 - 289 121595911 - Ajs_3619 - MOSC domain-containing protein 3476 75.00 +1 3824086..3825225 + 379 121595912 - Ajs_3620 - 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 3477 66.67 0 3825269..3825979 + 236 121595913 - Ajs_3621 - thiol:disulfide interchange protein DsbC 3478 70.88 0 3826146..3827927 + 593 121595914 - Ajs_3622 - peptidase M61 domain-containing protein 3479 64.51 0 3827924..3828757 + 277 121595915 - Ajs_3623 - short chain enoyl-CoA hydratase 3480 70.15 0 3828954..3829412 + 152 121595916 - Ajs_3624 - hypothetical protein 3481 64.59 0 3829550..3830896 + 448 121595917 - Ajs_3625 - tRNA-i(6)A37 thiotransferase enzyme MiaB 3482 66.52 0 3831018..3832397 - 459 121595918 - Ajs_3626 - signal recognition particle subunit FFH/SRP54 (srp54) 3483 70.29 0 3832489..3833289 + 266 121595919 - Ajs_3627 - cytochrome c assembly protein 3484 69.26 0 3833286..3833516 + 76 121595920 - Ajs_3628 - hypothetical protein 3485 67.25 0 3833521..3835221 + 566 121595921 - Ajs_3629 - integral membrane sensor signal transduction histidine kinase 3486 67.20 0 3835237..3836745 + 502 121595922 - Ajs_3630 - two component, sigma54 specific, Fis family transcriptional regulator 3487 65.67 0 3836726..3837325 + 199 121595923 - Ajs_3631 - N-acetyl-anhydromuranmyl-L-alanine amidase 3488 62.45 0 3837681..3840599 + 972 121595924 - Ajs_3632 - ribonucleotide-diphosphate reductase subunit alpha 3489 58.94 -1 3840738..3841928 + 396 121595925 - Ajs_3633 - ribonucleotide-diphosphate reductase subunit beta 3490 62.03 0 3842109..3842690 + 193 121595926 - Ajs_3634 - histone protein 3491 62.21 0 3842788..3843684 - 298 121595927 - Ajs_3635 - ribokinase-like domain-containing protein 3492 65.77 0 3843710..3845047 - 445 121595928 - Ajs_3636 - Zinc finger-domain-containing protein 3493 66.22 0 3845097..3845990 - 297 121595929 - Ajs_3637 - 50S ribosomal protein L11P methyltransferase 3494 63.04 0 3846076..3847425 - 449 121595930 - Ajs_3638 - acetyl-CoA carboxylase, biotin carboxylase 3495 64.09 0 3847539..3848003 - 154 121595931 - Ajs_3639 - biotin carboxyl carrier protein 3496 66.50 0 3848114..3848701 - 195 121595932 - Ajs_3640 - redoxin domain-containing protein 3497 66.01 0 3848698..3849309 - 203 121595933 - Ajs_3641 - hypothetical protein 3498 69.33 0 3849526..3850950 + 474 121595934 - Ajs_3642 - UDP-N-acetylmuramate 66.47 MEAN 4.71 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0