version 1.0
Acidovorax sp. JS42, complete genome - 1..4448856 4007 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3371 62.86 0 3707908..3708222 + 104 121595807 - Ajs_3514 - transport-associated 3372 69.03 0 3708313..3709413 + 366 121595808 - Ajs_3515 - hypothetical protein 3373 67.07 0 3709414..3709911 - 165 121595809 - Ajs_3516 - pantetheine-phosphate adenylyltransferase 3374 74.04 +1 3710057..3710680 - 207 121595810 - Ajs_3517 - putative methyltransferase 3375 70.14 0 3710677..3712059 - 460 121595811 - Ajs_3518 - peptidase M16 domain-containing protein 3376 71.00 0 3712075..3713529 - 484 121595812 - Ajs_3519 - peptidase M16 domain-containing protein 3377 69.45 0 3713559..3714707 + 382 121595813 - Ajs_3520 - signal recognition particle-docking protein FtsY 3378 69.70 0 3714758..3715120 - 120 121595814 - Ajs_3521 - CutA1 divalent ion tolerance protein 3379 64.60 0 3715281..3716246 + 321 121595815 - Ajs_3522 - RNA polymerase, sigma 32 subunit, RpoH 3380 72.30 +1 3716374..3717384 + 336 121595816 - Ajs_3523 - hypothetical protein 3381 74.07 +1 3717613..3718395 + 260 121595817 - Ajs_3524 - cyclic nucleotide-binding protein 3382 70.89 0 3718417..3720240 - 607 121595818 - Ajs_3525 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 3383 65.20 0 3720456..3721067 - 203 121595819 - Ajs_3526 - electron transport protein SCO1/SenC 3384 66.78 0 3721077..3721997 - 306 121595820 - Ajs_3527 - protoheme IX farnesyltransferase 3385 72.29 +1 3721994..3723184 - 396 121595821 - Ajs_3528 - cytochrome oxidase assembly 3386 71.60 +1 3723190..3723939 - 249 121595822 - Ajs_3529 - hypothetical protein 3387 70.66 0 3723881..3724657 - 258 121595823 - Ajs_3530 - putative transmembrane cytochrome oxidase 3388 65.38 0 3724664..3724897 + 77 121595824 - Ajs_3531 - putative transmembrane protein 3389 64.85 0 3725075..3725956 - 293 121595825 - Ajs_3532 - cytochrome c oxidase, subunit III 3390 63.33 0 3726015..3726224 - 69 121595826 - Ajs_3533 - hypothetical protein 3391 66.34 0 3726221..3726841 - 206 121595827 - Ajs_3534 - cytochrome C oxidase assembly protein 3392 57.66 -1 3726857..3726967 - 36 121595828 - Ajs_3535 - hypothetical protein 3393 63.30 0 3726985..3728619 - 544 121595829 - Ajs_3536 - cytochrome-c oxidase 3394 64.44 0 3728652..3729821 - 389 121595830 - Ajs_3537 - cytochrome c oxidase, subunit II 3395 58.50 -1 3729913..3730206 + 97 121595831 - Ajs_3538 - hypothetical protein 3396 70.19 0 3730245..3731153 - 302 121595832 - Ajs_3539 - biotin synthesis protein BioC 3397 74.49 +1 3731189..3731917 + 242 121595833 - Ajs_3540 - ComF family protein 3398 67.54 0 3731927..3732496 + 189 121595834 - Ajs_3541 - tRNA/rRNA methyltransferase (SpoU) 3399 69.68 0 3732526..3732990 - 154 121595835 - Ajs_3542 - dehydratase 3400 70.53 0 3733073..3733693 - 206 121595836 - Ajs_3543 - cobyrinic acid a,c-diamide synthase 3401 68.23 0 3733841..3734479 - 212 121595837 - Ajs_3544 - lysine exporter protein LysE/YggA 3402 68.90 0 3734767..3736734 + 655 121595838 - Ajs_3545 - potassium efflux system protein 3403 67.67 0 3736759..3737751 - 330 121595839 - Ajs_3546 - hypothetical protein 3404 71.54 +1 3737840..3738640 - 266 121595840 - Ajs_3547 - 3-oxoadipate enol-lactonase 3405 70.63 0 3738668..3739879 - 403 121595841 - Ajs_3548 - beta-ketoadipyl CoA thiolase 3406 67.43 0 3739955..3740608 - 217 121595842 - Ajs_3549 - butyryl-CoA:acetate CoA transferase 3407 66.38 0 3740636..3741331 - 231 121595843 - Ajs_3550 - 3-oxoacid CoA-transferase, A subunit 3408 68.03 0 3741447..3742250 + 267 121595844 - Ajs_3551 - IclR family transcriptional regulator 3409 68.64 0 3742668..3743123 + 151 121595845 - Ajs_3553 - hypothetical protein 3410 71.65 +1 3743084..3743986 - 300 121595846 - Ajs_3554 - UspA domain-containing protein 3411 63.18 0 3744447..3745106 - 219 121595847 - Ajs_3555 - cytochrome c, class I 3412 61.92 0 3745215..3746057 + 280 121595848 - Ajs_3556 - ATPase central domain-containing protein 3413 69.30 0 3746071..3746298 + 75 121595849 - Ajs_3557 - hypothetical protein 3414 68.66 0 3746316..3746918 + 200 121595850 - Ajs_3558 - GCN5-related N-acetyltransferase 3415 63.22 0 3746937..3748124 + 395 121595851 - Ajs_3559 - hypothetical protein 3416 71.86 +1 3748130..3750034 + 634 121595852 - Ajs_3560 - surface antigen (D15) 3417 76.13 +2 3750142..3754284 + 1380 121595853 - Ajs_3561 - hypothetical protein 3418 73.83 +1 3754493..3754855 - 120 121595854 - Ajs_3562 - hypothetical protein 3419 73.22 +1 3755146..3756549 - 467 121595855 - Ajs_3563 - cardiolipin synthetase 2 3420 71.43 +1 3756880..3757257 - 125 121595856 - Ajs_3564 - arsenate reductase 3421 73.00 +1 3757305..3758963 - 552 121595857 - Ajs_3565 - binding-protein-dependent transport systems inner membrane component 3422 70.19 0 3759183..3760259 + 358 121595858 - Ajs_3566 - ABC transporter related 3423 66.59 0 3760303..3761529 - 408 121595859 - Ajs_3567 - hypothetical protein 3424 71.52 +1 3761660..3762400 - 246 121595860 - Ajs_3568 - lyso-ornithine lipid acyltransferase 3425 71.30 +1 3762420..3763715 - 431 121595861 - Ajs_3569 - dihydroorotase 3426 64.59 0 3763928..3764890 - 320 121595862 pyrB Ajs_3570 - aspartate carbamoyltransferase catalytic subunit 3427 70.60 0 3764893..3765426 - 177 121595863 - Ajs_3571 - phosphoribosyltransferase 3428 69.76 0 3765423..3765842 - 139 121595864 - Ajs_3572 - Holliday junction resolvase YqgF 3429 65.33 0 3765839..3766438 - 199 121595865 - Ajs_3573 - hypothetical protein 3430 66.17 0 3766565..3772645 - 2026 121595866 - Ajs_3574 - CheA signal transduction histidine kinases 3431 64.72 0 3772692..3774956 - 754 121595867 - Ajs_3575 - methyl-accepting chemotaxis sensory transducer 3432 65.15 0 3774978..3775505 - 175 121595868 - Ajs_3576 - putative CheW protein 3433 57.92 -1 3775522..3775887 - 121 121595869 - Ajs_3577 - response regulator receiver protein 3434 53.44 -2 3775899..3776291 - 130 121595870 - Ajs_3578 - response regulator receiver protein 3435 58.17 -1 3776343..3776495 - 50 121595871 - Ajs_3579 - rubredoxin-type Fe(Cys)4 protein 3436 64.87 0 3776611..3777555 + 314 121595872 - Ajs_3580 - phosphomethylpyrimidine kinase type-1 3437 68.58 0 3777539..3778843 + 434 121595873 - Ajs_3581 - glutamate-1-semialdehyde 2,1-aminomutase 3438 69.85 0 3778933..3780786 + 617 121595874 - Ajs_3582 - alkaline phosphatase 3439 74.24 +1 3780880..3781341 - 153 121595875 - Ajs_3583 - cytochrome c, class I 3440 67.73 0 3781361..3782962 - 533 121595876 - Ajs_3584 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3441 63.25 0 3783045..3783278 - 77 121595877 - Ajs_3585 - DNA-binding protein Fis 3442 70.24 0 3783259..3784320 - 353 121595878 - Ajs_3586 - nifR3 family TIM-barrel protein 3443 70.28 0 3784415..3785023 + 202 121595879 - Ajs_3587 - hypothetical protein 3444 63.78 0 3785361..3786536 - 391 121595880 - Ajs_3588 - HipA domain-containing protein 3445 60.90 -1 3786581..3786892 - 103 121595881 - Ajs_3589 - helix-turn-helix domain-containing protein 3446 60.00 -1 3787037..3787276 - 79 121595882 - Ajs_3590 - XRE family transcriptional regulator 3447 62.16 0 3787420..3788085 + 221 121595883 - Ajs_3591 - hypothetical protein 3448 59.12 -1 3788103..3788831 + 242 121595884 - Ajs_3592 - hypothetical protein 3449 69.51 0 3788896..3789633 - 245 121595885 - Ajs_3593 - IstB ATP binding domain-containing protein 3450 68.74 0 3789670..3791214 - 514 121595886 - Ajs_3594 - integrase catalytic subunit 3451 60.92 -1 3791300..3791821 + 173 121595887 - Ajs_3595 - hypothetical protein 3452 62.05 0 3791818..3792294 + 158 121595888 - Ajs_3596 - hypothetical protein 3453 61.35 -1 3792281..3792562 + 93 121595889 - Ajs_3597 - hypothetical protein 3454 62.16 0 3792543..3794117 - 524 121595890 - Ajs_3598 - ATPase central domain-containing protein 3455 61.34 -1 3794943..3795806 - 287 121595891 - Ajs_3599 - hypothetical protein 3456 62.06 0 3795809..3798562 - 917 121595892 - Ajs_3600 - hypothetical protein 3457 63.25 0 3798562..3799176 - 204 121595893 - Ajs_3601 - hypothetical protein 3458 62.70 0 3799173..3800432 - 419 121595894 - Ajs_3602 - hypothetical protein 3459 60.07 -1 3800846..3802558 - 570 121595895 - Ajs_3603 - hypothetical protein 3460 62.33 0 3802582..3803850 - 422 121595896 - Ajs_3604 - putative transcriptional regulator 3461 61.75 -1 3803852..3806719 - 955 121595897 - Ajs_3605 - SMC domain-containing protein 3462 60.77 -1 3806730..3809732 - 1000 121595898 - Ajs_3606 - HsdR family type I site-specific deoxyribonuclease 3463 53.99 -2 3809732..3810922 - 396 121595899 - Ajs_3607 - restriction modification system, type I 3464 60.63 -1 3810915..3812801 - 628 121595900 - Ajs_3608 - putative transcriptional regulator 3465 62.34 0 3812794..3814320 - 508 121595901 - Ajs_3609 - N-6 DNA methylase 3466 61.34 -1 3814317..3815819 - 500 121595902 - Ajs_3610 - N-6 DNA methylase 3467 61.11 -1 3815816..3816013 - 65 121595903 - Ajs_3611 - hypothetical protein 3468 61.42 -1 3816001..3816267 - 88 121595904 - Ajs_3612 - hypothetical protein 3469 63.27 0 3816280..3817368 - 362 121595905 - Ajs_3613 - transposase, IS4 family protein 3470 63.76 0 3817399..3818466 - 355 121595906 - Ajs_3614 - phage integrase family protein 66.47 MEAN 4.71 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0