version 1.0
Acidovorax sp. JS42, complete genome - 1..4448856 4007 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3229 63.97 0 3552108..3553184 - 358 121595665 - Ajs_3363 - inner-membrane translocator 3230 65.16 0 3553198..3554127 - 309 121595666 - Ajs_3364 - inner-membrane translocator 3231 66.89 0 3554484..3555812 - 442 121595667 - Ajs_3365 - recombination factor protein RarA 3232 63.26 0 3555809..3556807 - 332 121595668 - Ajs_3366 - integron integrase 3233 57.70 -1 3556965..3557945 + 326 121595669 - Ajs_3367 - transposase, IS4 family protein 3234 58.67 -1 3558135..3558434 + 99 121595670 - Ajs_3368 - hypothetical protein 3235 54.44 -2 3558444..3558713 + 89 121595671 - Ajs_3369 - hypothetical protein 3236 64.55 0 3559013..3560239 + 408 121595672 - Ajs_3370 - transposase IS116/IS110/IS902 family protein 3237 54.26 -2 3560381..3560638 + 85 121595673 - Ajs_3371 - hypothetical protein 3238 60.98 -1 3560707..3560952 + 81 121595674 - Ajs_3372 - hypothetical protein 3239 58.16 -1 3560969..3561250 + 93 121595675 - Ajs_3373 - hypothetical protein 3240 64.55 0 3561462..3562688 + 408 121595676 - Ajs_3374 - transposase IS116/IS110/IS902 family protein 3241 64.55 0 3563865..3565091 - 408 121595677 - Ajs_3377 - transposase IS116/IS110/IS902 family protein 3242 64.55 0 3565486..3566712 - 408 121595678 - Ajs_3378 - transposase IS116/IS110/IS902 family protein 3243 68.97 0 3567122..3567511 + 129 121595679 - Ajs_3379 - hypothetical protein 3244 72.97 +1 3567511..3568176 + 221 121595680 - Ajs_3380 - uracil-DNA glycosylase superfamily protein 3245 66.67 0 3568237..3568869 - 210 121595681 - Ajs_3381 - outer membrane lipoprotein carrier protein LolA 3246 67.78 0 3568931..3571261 - 776 121595682 - Ajs_3382 - DNA translocase FtsK 3247 65.93 0 3571554..3572507 + 317 121595683 - Ajs_3383 - thioredoxin reductase 3248 60.68 -1 3572741..3572974 + 77 121595684 - Ajs_3384 - 50S ribosomal protein L28P 3249 52.63 -2 3572995..3573165 + 56 121595685 - Ajs_3385 - 50S ribosomal protein L33P 3250 67.66 0 3573304..3574515 - 403 121595686 - Ajs_3386 - fatty acid desaturase 3251 69.17 0 3574648..3575925 - 425 121595687 - Ajs_3387 - Fmu (Sun) domain-containing protein 3252 71.98 +1 3575969..3577906 - 645 121595688 - Ajs_3388 - peptidase M48, Ste24p 3253 67.83 0 3577948..3578205 + 85 121595689 - Ajs_3389 - hypothetical protein 3254 71.33 +1 3578414..3578971 + 185 121595690 - Ajs_3390 - hypothetical protein 3255 68.21 0 3579036..3579620 - 194 121595691 - Ajs_3391 - phosphoribosylglycinamide formyltransferase 3256 71.24 +1 3579644..3580321 + 225 121595692 - Ajs_3392 - hypothetical protein 3257 65.82 0 3580409..3581590 + 393 121595693 - Ajs_3393 - acyl-CoA dehydrogenase domain-containing protein 3258 69.53 0 3581603..3582718 + 371 121595694 - Ajs_3394 - acyl-CoA dehydrogenase domain-containing protein 3259 59.37 -1 3583117..3584103 + 328 121595695 - Ajs_3395 - transposase, IS4 family protein 3260 65.15 0 3584263..3585582 + 439 121595696 - Ajs_3396 - methyltransferase type 12 3261 64.87 0 3585646..3586203 - 185 121595697 - Ajs_3397 - HNH endonuclease 3262 69.92 0 3586366..3587409 + 347 121595698 - Ajs_3398 - bifunctional riboflavin kinase/FMN adenylyltransferase 3263 66.42 0 3587524..3590379 + 951 121595699 - Ajs_3399 - isoleucyl-tRNA synthetase 3264 67.87 0 3590379..3590876 + 165 121595700 - Ajs_3400 - signal peptidase II 3265 68.52 0 3590971..3592641 + 556 121595701 - Ajs_3401 - Na/Pi-cotransporter II-related protein 3266 68.79 0 3592632..3593621 - 329 121595702 - Ajs_3402 - hypothetical protein 3267 64.55 0 3594079..3595305 + 408 121595703 - Ajs_3403 - transposase IS116/IS110/IS902 family protein 3268 71.78 +1 3595453..3596274 - 273 121595704 - Ajs_3404 - NUDIX hydrolase 3269 69.32 0 3597389..3598291 + 300 121595705 - Ajs_3406 - hypothetical protein 3270 71.19 +1 3601000..3602082 - 360 121595706 - Ajs_3408 - TRAP dicarboxylate transporter- DctP subunit 3271 63.27 0 3602540..3603628 + 362 121595707 - Ajs_3410 - transposase, IS4 family protein 3272 65.48 0 3605044..3606555 - 503 121595708 - Ajs_3411 - hypothetical protein 3273 61.55 -1 3606572..3607060 - 162 121595709 - Ajs_3412 - hypothetical protein 3274 69.34 0 3607362..3609158 - 598 121595710 - Ajs_3413 - type II secretion system protein E 3275 68.50 0 3609179..3609940 - 253 121595711 - Ajs_3414 - hypothetical protein 3276 67.63 0 3609945..3610568 - 207 121595712 - Ajs_3415 - hypothetical protein 3277 69.98 0 3610575..3611420 - 281 121595713 - Ajs_3416 - TatD-related deoxyribonuclease 3278 69.70 0 3611530..3611727 - 65 121595714 - Ajs_3417 - hypothetical protein 3279 70.23 0 3611783..3612091 - 102 121595715 - Ajs_3418 - ArsR family transcriptional regulator 3280 69.09 0 3612205..3612576 + 123 121595716 - Ajs_3419 - alkylhydroperoxidase 3281 70.34 0 3612632..3613312 - 226 121595717 - Ajs_3420 - lipoprotein releasing system, ATP-binding protein 3282 67.38 0 3613305..3614558 - 417 121595718 - Ajs_3421 - LolC/E family lipoprotein releasing system, transmembrane protein 3283 65.58 0 3614696..3615886 - 396 121595719 - Ajs_3422 - glycerophosphoryl diester phosphodiesterase 3284 73.77 +1 3616003..3616959 + 318 121595720 - Ajs_3423 - hypothetical protein 3285 70.84 0 3616956..3618680 + 574 121595721 - Ajs_3424 - single-stranded-DNA-specific exonuclease RecJ 3286 60.73 -1 3618775..3619077 + 100 121595722 - Ajs_3425 - putative lipoprotein 3287 57.70 -1 3619206..3620186 - 326 121595723 - Ajs_3426 - transposase, IS4 family protein 3288 61.38 -1 3620641..3621018 + 125 121595724 - Ajs_3428 - hypothetical protein 3289 61.63 -1 3621015..3621689 + 224 121595725 - Ajs_3429 - hypothetical protein 3290 68.55 0 3621796..3623550 - 584 121595726 - Ajs_3430 - methyl-accepting chemotaxis sensory transducer 3291 67.80 0 3623754..3624632 + 292 121595727 - Ajs_3431 - phosphotransferase domain-containing protein 3292 66.04 0 3624648..3625283 + 211 121595728 - Ajs_3432 - Sua5/YciO/YrdC/YwlC family protein 3293 74.35 +1 3625408..3627477 - 689 121595729 - Ajs_3433 - von Willebrand factor, type A 3294 70.90 0 3627480..3628283 - 267 121595730 - Ajs_3434 - ATPase 3295 63.25 0 3628303..3629676 - 457 121595731 - Ajs_3435 - cytochrome c oxidase, subunit I 3296 64.38 0 3629707..3630579 - 290 121595732 - Ajs_3436 - cytochrome c, class I 3297 65.21 0 3630852..3631538 + 228 121595733 - Ajs_3437 - peptidase M50 3298 67.28 0 3631563..3632867 + 434 121595734 - Ajs_3438 - tryptophanyl-tRNA synthetase 3299 58.95 -1 3633155..3633439 + 94 121595735 - Ajs_3439 - hypothetical protein 3300 64.55 0 3634290..3635516 + 408 121595736 - Ajs_3441 - transposase IS116/IS110/IS902 family protein 3301 58.30 -1 3636367..3637131 - 254 121595737 - Ajs_3442 - diguanylate phosphodiesterase 3302 54.50 -2 3637389..3637955 + 188 121595738 - Ajs_3444 - hypothetical protein 3303 65.54 0 3638504..3639832 - 442 121595739 - Ajs_3445 - seryl-tRNA synthetase 3304 71.22 +1 3639965..3640645 + 226 121595740 - Ajs_3446 - signal transduction protein 3305 66.59 0 3640649..3641971 - 440 121595741 - Ajs_3447 - hypothetical protein 3306 67.77 0 3642221..3643216 - 331 121595742 - Ajs_3448 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3307 69.05 0 3643230..3643607 - 125 121595743 - Ajs_3449 - peptidylprolyl isomerase, FKBP-type 3308 71.41 +1 3643789..3644505 + 238 121595744 - Ajs_3450 - DNA repair protein RadC 3309 73.66 +1 3644502..3645716 + 404 121595745 - Ajs_3451 - hypothetical protein 3310 73.98 +1 3645689..3646372 + 227 121595746 - Ajs_3452 - Smr protein/MutS2 3311 67.15 0 3646507..3648588 - 693 121595747 - Ajs_3453 - 5'-nucleotidase domain-containing protein 3312 68.31 0 3648727..3649152 - 141 121595748 - Ajs_3454 - globin 3313 71.52 +1 3649189..3649641 - 150 121595749 - Ajs_3455 - TraR/DksA family transcriptional regulator 3314 72.26 +1 3649619..3651190 - 523 121595750 - Ajs_3456 - hypothetical protein 3315 70.61 0 3651236..3651463 - 75 121595751 - Ajs_3457 - hypothetical protein 3316 70.36 0 3651472..3654045 - 857 121595752 - Ajs_3458 - hypothetical protein 3317 65.10 0 3654119..3655009 - 296 121595753 - Ajs_3459 - formate dehydrogenase, subunit FdhD 3318 71.25 +1 3655126..3655518 - 130 121595754 - Ajs_3460 - hypothetical protein 3319 66.17 0 3655515..3656720 - 401 121595755 - Ajs_3461 - formate dehydrogenase gamma subunit 3320 64.96 0 3656734..3656967 - 77 121595756 - Ajs_3462 - putative lipoprotein 3321 64.25 0 3656964..3657584 - 206 121595757 - Ajs_3463 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 3322 62.19 0 3657595..3660564 - 989 121595758 - Ajs_3464 - molybdopterin oxidoreductase 3323 64.94 0 3660619..3660849 + 76 121595759 - Ajs_3465 - hypothetical protein 3324 68.08 0 3660973..3661611 - 212 121595760 - Ajs_3466 - cytoplasmic chaperone TorD family protein 3325 68.62 0 3661608..3663707 - 699 121595761 - Ajs_3467 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 3326 68.86 0 3663631..3664314 - 227 121595762 - Ajs_3468 - hypothetical protein 3327 69.76 0 3664307..3664888 - 193 121595763 - Ajs_3469 - hypothetical protein 3328 69.85 0 3664910..3667801 - 963 121595764 - Ajs_3470 - formate dehydrogenase, alpha subunit 66.47 MEAN 4.71 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0