version 1.0
Acidovorax sp. JS42, complete genome - 1..4448856 4007 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3192 62.17 0 3522792..3523769 + 325 121595628 - Ajs_3326 - guanosine 5'-monophosphate oxidoreductase 3193 51.23 -2 3524913..3525644 - 243 121595629 - Ajs_3327 - hypothetical protein 3194 65.55 0 3525699..3526145 - 148 121595630 - Ajs_3328 - hypothetical protein 3195 67.63 0 3526296..3526607 - 103 121595631 - Ajs_3329 - hypothetical protein 3196 63.89 0 3526618..3527085 - 155 121595632 - Ajs_3330 - hypothetical protein 3197 63.27 0 3527572..3528660 + 362 121595633 - Ajs_3331 - transposase, IS4 family protein 3198 61.23 -1 3528800..3529222 - 140 121595634 - Ajs_3332 - hypothetical protein 3199 64.76 0 3529215..3529529 - 104 121595635 - Ajs_3333 - hypothetical protein 3200 66.16 0 3529526..3530113 - 195 121595636 - Ajs_3334 - hypothetical protein 3201 59.68 -1 3530091..3530276 - 61 121595637 - Ajs_3335 - hypothetical protein 3202 64.63 0 3530276..3530521 - 81 121595638 - Ajs_3336 - hypothetical protein 3203 60.71 -1 3530670..3531491 - 273 121595639 - Ajs_3337 - hypothetical protein 3204 62.77 0 3531593..3531874 - 93 121595640 - Ajs_3338 - hypothetical protein 3205 58.06 -1 3531861..3532139 - 92 121595641 - Ajs_3339 - hypothetical protein 3206 64.02 0 3532196..3533554 - 452 121595642 - Ajs_3340 - phage integrase family protein 3207 71.62 +1 3534001..3534666 + 221 121595643 - Ajs_3341 - Crp/FNR family transcriptional regulator 3208 71.59 +1 3534690..3535136 + 148 121595644 - Ajs_3342 - hypothetical protein 3209 70.35 0 3535230..3535718 + 162 121595645 - Ajs_3343 - hypothetical protein 3210 69.42 0 3535899..3537134 + 411 121595646 - Ajs_3344 - Bcr/CflA subfamily drug resistance transporter 3211 68.64 0 3537411..3539288 - 625 121595647 - Ajs_3345 - DEAD/DEAH box helicase domain-containing protein 3212 63.90 0 3539571..3540149 - 192 121595648 - Ajs_3346 - oligoribonuclease 3213 68.11 0 3540188..3541501 + 437 121595649 - Ajs_3347 - Ste24 endopeptidase 3214 59.59 -1 3541498..3541836 + 112 121595650 - Ajs_3348 - pterin-4-alpha-carbinolamine dehydratase 3215 69.04 0 3541841..3542809 + 322 121595651 - Ajs_3349 - ribosome small subunit-dependent GTPase A 3216 69.30 0 3542875..3543861 - 328 121595652 - Ajs_3350 - cobalamin biosynthesis protein CbiB 3217 69.80 0 3543940..3544674 - 244 121595653 - Ajs_3351 - NUDIX hydrolase 3218 63.28 0 3544742..3545125 - 127 121595654 - Ajs_3352 - 50S ribosomal protein L19P 3219 70.96 0 3545239..3546006 - 255 121595655 - Ajs_3353 - tRNA (Guanine37-N1) methyltransferase 3220 66.35 0 3546025..3546654 - 209 121595656 - Ajs_3354 - 16S rRNA processing protein RimM 3221 65.48 0 3546686..3546937 - 83 121595657 - Ajs_3355 - SSU ribosomal protein S16P 3222 69.35 0 3547065..3547586 + 173 121595658 - Ajs_3356 - GCN5-related N-acetyltransferase 3223 64.21 0 3547609..3548055 + 148 121595659 - Ajs_3357 - hypothetical protein 3224 65.78 0 3548192..3549202 - 336 121595660 - Ajs_3358 - phosphate transporter 3225 63.43 0 3549262..3549909 - 215 121595661 - Ajs_3359 - hypothetical protein 3226 62.26 0 3550081..3550443 - 120 121595662 - Ajs_3360 - hypothetical protein 3227 65.84 0 3550563..3551291 - 242 121595663 - Ajs_3361 - ABC transporter related 3228 64.75 0 3551304..3552086 - 260 121595664 - Ajs_3362 - ABC transporter related 3229 63.97 0 3552108..3553184 - 358 121595665 - Ajs_3363 - inner-membrane translocator 3230 65.16 0 3553198..3554127 - 309 121595666 - Ajs_3364 - inner-membrane translocator 3231 66.89 0 3554484..3555812 - 442 121595667 - Ajs_3365 - recombination factor protein RarA 3232 63.26 0 3555809..3556807 - 332 121595668 - Ajs_3366 - integron integrase 3233 57.70 -1 3556965..3557945 + 326 121595669 - Ajs_3367 - transposase, IS4 family protein 3234 58.67 -1 3558135..3558434 + 99 121595670 - Ajs_3368 - hypothetical protein 3235 54.44 -2 3558444..3558713 + 89 121595671 - Ajs_3369 - hypothetical protein 3236 64.55 0 3559013..3560239 + 408 121595672 - Ajs_3370 - transposase IS116/IS110/IS902 family protein 3237 54.26 -2 3560381..3560638 + 85 121595673 - Ajs_3371 - hypothetical protein 3238 60.98 -1 3560707..3560952 + 81 121595674 - Ajs_3372 - hypothetical protein 3239 58.16 -1 3560969..3561250 + 93 121595675 - Ajs_3373 - hypothetical protein 3240 64.55 0 3561462..3562688 + 408 121595676 - Ajs_3374 - transposase IS116/IS110/IS902 family protein 3241 64.55 0 3563865..3565091 - 408 121595677 - Ajs_3377 - transposase IS116/IS110/IS902 family protein 3242 64.55 0 3565486..3566712 - 408 121595678 - Ajs_3378 - transposase IS116/IS110/IS902 family protein 3243 68.97 0 3567122..3567511 + 129 121595679 - Ajs_3379 - hypothetical protein 3244 72.97 +1 3567511..3568176 + 221 121595680 - Ajs_3380 - uracil-DNA glycosylase superfamily protein 3245 66.67 0 3568237..3568869 - 210 121595681 - Ajs_3381 - outer membrane lipoprotein carrier protein LolA 3246 67.78 0 3568931..3571261 - 776 121595682 - Ajs_3382 - DNA translocase FtsK 3247 65.93 0 3571554..3572507 + 317 121595683 - Ajs_3383 - thioredoxin reductase 3248 60.68 -1 3572741..3572974 + 77 121595684 - Ajs_3384 - 50S ribosomal protein L28P 3249 52.63 -2 3572995..3573165 + 56 121595685 - Ajs_3385 - 50S ribosomal protein L33P 3250 67.66 0 3573304..3574515 - 403 121595686 - Ajs_3386 - fatty acid desaturase 3251 69.17 0 3574648..3575925 - 425 121595687 - Ajs_3387 - Fmu (Sun) domain-containing protein 3252 71.98 +1 3575969..3577906 - 645 121595688 - Ajs_3388 - peptidase M48, Ste24p 3253 67.83 0 3577948..3578205 + 85 121595689 - Ajs_3389 - hypothetical protein 3254 71.33 +1 3578414..3578971 + 185 121595690 - Ajs_3390 - hypothetical protein 3255 68.21 0 3579036..3579620 - 194 121595691 - Ajs_3391 - phosphoribosylglycinamide formyltransferase 3256 71.24 +1 3579644..3580321 + 225 121595692 - Ajs_3392 - hypothetical protein 3257 65.82 0 3580409..3581590 + 393 121595693 - Ajs_3393 - acyl-CoA dehydrogenase domain-containing protein 3258 69.53 0 3581603..3582718 + 371 121595694 - Ajs_3394 - acyl-CoA dehydrogenase domain-containing protein 3259 59.37 -1 3583117..3584103 + 328 121595695 - Ajs_3395 - transposase, IS4 family protein 3260 65.15 0 3584263..3585582 + 439 121595696 - Ajs_3396 - methyltransferase type 12 3261 64.87 0 3585646..3586203 - 185 121595697 - Ajs_3397 - HNH endonuclease 3262 69.92 0 3586366..3587409 + 347 121595698 - Ajs_3398 - bifunctional riboflavin kinase/FMN adenylyltransferase 3263 66.42 0 3587524..3590379 + 951 121595699 - Ajs_3399 - isoleucyl-tRNA synthetase 3264 67.87 0 3590379..3590876 + 165 121595700 - Ajs_3400 - signal peptidase II 3265 68.52 0 3590971..3592641 + 556 121595701 - Ajs_3401 - Na/Pi-cotransporter II-related protein 3266 68.79 0 3592632..3593621 - 329 121595702 - Ajs_3402 - hypothetical protein 3267 64.55 0 3594079..3595305 + 408 121595703 - Ajs_3403 - transposase IS116/IS110/IS902 family protein 3268 71.78 +1 3595453..3596274 - 273 121595704 - Ajs_3404 - NUDIX hydrolase 3269 69.32 0 3597389..3598291 + 300 121595705 - Ajs_3406 - hypothetical protein 3270 71.19 +1 3601000..3602082 - 360 121595706 - Ajs_3408 - TRAP dicarboxylate transporter- DctP subunit 3271 63.27 0 3602540..3603628 + 362 121595707 - Ajs_3410 - transposase, IS4 family protein 3272 65.48 0 3605044..3606555 - 503 121595708 - Ajs_3411 - hypothetical protein 3273 61.55 -1 3606572..3607060 - 162 121595709 - Ajs_3412 - hypothetical protein 3274 69.34 0 3607362..3609158 - 598 121595710 - Ajs_3413 - type II secretion system protein E 3275 68.50 0 3609179..3609940 - 253 121595711 - Ajs_3414 - hypothetical protein 3276 67.63 0 3609945..3610568 - 207 121595712 - Ajs_3415 - hypothetical protein 3277 69.98 0 3610575..3611420 - 281 121595713 - Ajs_3416 - TatD-related deoxyribonuclease 3278 69.70 0 3611530..3611727 - 65 121595714 - Ajs_3417 - hypothetical protein 3279 70.23 0 3611783..3612091 - 102 121595715 - Ajs_3418 - ArsR family transcriptional regulator 3280 69.09 0 3612205..3612576 + 123 121595716 - Ajs_3419 - alkylhydroperoxidase 3281 70.34 0 3612632..3613312 - 226 121595717 - Ajs_3420 - lipoprotein releasing system, ATP-binding protein 3282 67.38 0 3613305..3614558 - 417 121595718 - Ajs_3421 - LolC/E family lipoprotein releasing system, transmembrane protein 3283 65.58 0 3614696..3615886 - 396 121595719 - Ajs_3422 - glycerophosphoryl diester phosphodiesterase 3284 73.77 +1 3616003..3616959 + 318 121595720 - Ajs_3423 - hypothetical protein 3285 70.84 0 3616956..3618680 + 574 121595721 - Ajs_3424 - single-stranded-DNA-specific exonuclease RecJ 3286 60.73 -1 3618775..3619077 + 100 121595722 - Ajs_3425 - putative lipoprotein 3287 57.70 -1 3619206..3620186 - 326 121595723 - Ajs_3426 - transposase, IS4 family protein 3288 61.38 -1 3620641..3621018 + 125 121595724 - Ajs_3428 - hypothetical protein 3289 61.63 -1 3621015..3621689 + 224 121595725 - Ajs_3429 - hypothetical protein 3290 68.55 0 3621796..3623550 - 584 121595726 - Ajs_3430 - methyl-accepting chemotaxis sensory transducer 3291 67.80 0 3623754..3624632 + 292 121595727 - Ajs_3431 - phosphotransferase domain-containing protein 66.47 MEAN 4.71 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0