version 1.0
Acidovorax sp. JS42, complete genome - 1..4448856 4007 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3119 67.41 0 3436966..3437634 + 222 121595555 - Ajs_3252 - small-conductance mechanosensitive channel-like protein 3120 64.35 0 3437997..3439118 + 373 121595556 - Ajs_3253 - extracellular ligand-binding receptor 3121 65.37 0 3439220..3440146 + 308 121595557 - Ajs_3254 - inner-membrane translocator 3122 66.43 0 3440146..3441387 + 413 121595558 livM Ajs_3255 - leucine/isoleucine/valine transporter permease subunit 3123 66.28 0 3441384..3442151 + 255 121595559 livG Ajs_3256 - leucine/isoleucine/valine transporter ATP-binding subunit 3124 66.39 0 3442151..3442864 + 237 121595560 - Ajs_3257 - ABC transporter related 3125 53.58 -2 3443195..3443515 + 106 121595561 - Ajs_3258 - hypothetical protein 3126 66.89 0 3443868..3444320 - 150 121595562 - Ajs_3259 - alkylhydroperoxidase 3127 69.80 0 3444551..3445603 - 350 121595563 - Ajs_3260 - 6-phosphofructokinase 3128 70.27 0 3445618..3446727 - 369 121595564 - Ajs_3261 - Beta-N-acetylhexosaminidase 3129 68.70 0 3446786..3447178 - 130 121595565 acpS Ajs_3262 - 4'-phosphopantetheinyl transferase 3130 69.36 0 3447230..3448009 - 259 121595566 - Ajs_3263 - pyridoxal phosphate biosynthetic protein PdxJ 3131 71.39 +1 3448149..3449864 - 571 121595567 - Ajs_3264 - hypothetical protein 3132 70.22 0 3450047..3450835 - 262 121595568 - Ajs_3265 - DNA repair protein RecO 3133 63.12 0 3451089..3452102 - 337 121595569 - Ajs_3266 - GTP-binding protein Era 3134 67.10 0 3452099..3452785 - 228 121595570 - Ajs_3267 - ribonuclease III 3135 60.05 -1 3452791..3453168 - 125 121595571 - Ajs_3268 - putative transmembrane protein 3136 61.92 0 3453196..3454164 - 322 121595572 - Ajs_3269 - signal peptidase I 3137 62.30 0 3454179..3455987 - 602 121595573 - Ajs_3270 - GTP-binding protein LepA 3138 63.31 0 3456428..3457858 - 476 121595574 - Ajs_3271 - protease Do 3139 63.55 0 3457998..3459023 - 341 121595575 - Ajs_3272 - sigma E regulatory protein, MucB/RseB 3140 65.06 0 3459089..3459712 - 207 121595576 - Ajs_3273 - anti sigma-E protein, RseA 3141 61.48 -1 3459753..3460388 - 211 121595577 - Ajs_3274 - RNA polymerase sigma factor RpoE 3142 65.17 0 3460385..3460918 - 177 121595578 - Ajs_3275 - hypothetical protein 3143 61.29 -1 3461010..3462254 - 414 121595579 - Ajs_3276 - 3-oxoacyl-[acyl-carrier-protein] synthase II 3144 53.75 -2 3462312..3462551 - 79 121595580 - Ajs_3277 - acyl carrier protein 3145 63.29 0 3462655..3463395 - 246 121595581 - Ajs_3278 - 3-oxoacyl-[acyl-carrier-protein] reductase 3146 66.25 0 3463392..3464360 - 322 121595582 - Ajs_3279 - [Acyl-carrier-protein] S-malonyltransferase 3147 64.72 0 3464402..3465379 - 325 121595583 - Ajs_3280 - 3-oxoacyl-(acyl carrier protein) synthase III 3148 61.82 0 3465398..3466429 - 343 121595584 - Ajs_3281 - phosphate:acyl-[acyl carrier protein] acyltransferase 3149 59.56 -1 3466552..3466734 - 60 121595585 - Ajs_3282 - 50S ribosomal protein L32P 3150 65.04 0 3466867..3467418 - 183 121595586 - Ajs_3283 - hypothetical protein 3151 71.33 +1 3467445..3468044 + 199 121595587 - Ajs_3284 - maf protein 3152 69.27 0 3468041..3468847 + 268 121595588 - Ajs_3285 - uroporphyrin-III C/tetrapyrrole methyltransferase 3153 67.34 0 3468932..3469975 - 347 121595589 - Ajs_3286 - peptidase S49 3154 66.40 0 3469980..3470357 - 125 121595590 - Ajs_3287 - Rieske (2Fe-2S) domain-containing protein 3155 68.46 0 3470357..3471025 - 222 121595591 - Ajs_3288 - HAD family hydrolase 3156 70.60 0 3472626..3475703 + 1025 121595592 - Ajs_3290 - ribonuclease E 3157 69.46 0 3475845..3476633 + 262 121595593 - Ajs_3291 - hypothetical protein 3158 68.22 0 3476665..3477051 + 128 121595594 - Ajs_3292 - hypothetical protein 3159 69.77 0 3477074..3477943 + 289 121595595 - Ajs_3293 - 2OG-Fe(II) oxygenase 3160 67.97 0 3478002..3478847 + 281 121595596 queF Ajs_3294 - 7-cyano-7-deazaguanine reductase 3161 70.38 0 3478963..3480522 - 519 121595597 - Ajs_3295 - methyl-accepting chemotaxis sensory transducer 3162 68.33 0 3480660..3481859 - 399 121595598 - Ajs_3296 - DNA-directed DNA polymerase 3163 71.47 +1 3482034..3482969 - 311 121595599 - Ajs_3297 - hypothetical protein 3164 67.35 0 3483127..3484299 - 390 121595600 - Ajs_3298 - (S)-2-hydroxy-acid oxidase 3165 73.39 +1 3484522..3486798 - 758 121595601 - Ajs_3299 - penicillin-binding protein 1C 3166 71.02 0 3486770..3487642 - 290 121595602 - Ajs_3300 - hypothetical protein 3167 70.37 0 3487721..3488098 - 125 121595603 - Ajs_3301 - hypothetical protein 3168 70.83 0 3488243..3488458 + 71 121595604 - Ajs_3302 - hypothetical protein 3169 71.46 +1 3488471..3489346 - 291 121595605 - Ajs_3303 - endonuclease/exonuclease/phosphatase 3170 65.09 0 3489417..3490238 - 273 121595606 - Ajs_3304 - binding-protein-dependent transport systems inner membrane component 3171 66.45 0 3490386..3491288 - 300 121595607 - Ajs_3305 - binding-protein-dependent transport systems inner membrane component 3172 64.43 0 3491302..3492597 - 431 121595608 - Ajs_3306 - extracellular solute-binding protein 3173 69.93 0 3492691..3493731 - 346 121595609 - Ajs_3307 - ABC transporter related 3174 65.47 0 3494055..3496151 - 698 121595610 - Ajs_3308 - choline/carnitine/betaine transporter 3175 71.33 +1 3496696..3502764 - 2022 121595611 - Ajs_3309 - alpha-2-macroglobulin domain-containing protein 3176 69.42 0 3502946..3505054 + 702 121595612 - Ajs_3310 - catalase 3177 71.79 +1 3505133..3506107 - 324 121595613 - Ajs_3311 - hypothetical protein 3178 67.97 0 3506241..3507701 - 486 121595614 - Ajs_3312 - argininosuccinate lyase 3179 73.78 +1 3507751..3508818 + 355 121595615 - Ajs_3313 - histidine kinase internal region 3180 73.44 +1 3508865..3509617 + 250 121595616 - Ajs_3314 - LytR/AlgR family transcriptional regulator 3181 70.28 0 3509772..3510602 - 276 121595617 - Ajs_3315 - zinc/iron permease 3182 68.46 0 3510721..3511614 - 297 121595618 - Ajs_3316 - carboxymethylenebutenolidase 3183 68.36 0 3511764..3514532 - 922 121595619 - Ajs_3317 - DNA polymerase I 3184 64.99 0 3514675..3515091 + 138 121595620 - Ajs_3318 - hypothetical protein 3185 65.58 0 3515128..3515496 + 122 121595621 - Ajs_3319 - hypothetical protein 3186 68.24 0 3515588..3516538 + 316 121595622 - Ajs_3320 - homoserine kinase 3187 68.96 0 3516689..3517516 + 275 121595623 - Ajs_3321 - hypothetical protein 3188 71.13 0 3517815..3518486 - 223 121595624 - Ajs_3322 - OmpA/MotB domain-containing protein 3189 69.95 0 3518486..3519094 - 202 121595625 - Ajs_3323 - hypothetical protein 3190 66.30 0 3519378..3521828 - 816 121595626 - Ajs_3324 - ATP-dependent DNA helicase UvrD 3191 71.45 +1 3521932..3522600 + 222 121595627 - Ajs_3325 - hypothetical protein 3192 62.17 0 3522792..3523769 + 325 121595628 - Ajs_3326 - guanosine 5'-monophosphate oxidoreductase 3193 51.23 -2 3524913..3525644 - 243 121595629 - Ajs_3327 - hypothetical protein 3194 65.55 0 3525699..3526145 - 148 121595630 - Ajs_3328 - hypothetical protein 3195 67.63 0 3526296..3526607 - 103 121595631 - Ajs_3329 - hypothetical protein 3196 63.89 0 3526618..3527085 - 155 121595632 - Ajs_3330 - hypothetical protein 3197 63.27 0 3527572..3528660 + 362 121595633 - Ajs_3331 - transposase, IS4 family protein 3198 61.23 -1 3528800..3529222 - 140 121595634 - Ajs_3332 - hypothetical protein 3199 64.76 0 3529215..3529529 - 104 121595635 - Ajs_3333 - hypothetical protein 3200 66.16 0 3529526..3530113 - 195 121595636 - Ajs_3334 - hypothetical protein 3201 59.68 -1 3530091..3530276 - 61 121595637 - Ajs_3335 - hypothetical protein 3202 64.63 0 3530276..3530521 - 81 121595638 - Ajs_3336 - hypothetical protein 3203 60.71 -1 3530670..3531491 - 273 121595639 - Ajs_3337 - hypothetical protein 3204 62.77 0 3531593..3531874 - 93 121595640 - Ajs_3338 - hypothetical protein 3205 58.06 -1 3531861..3532139 - 92 121595641 - Ajs_3339 - hypothetical protein 3206 64.02 0 3532196..3533554 - 452 121595642 - Ajs_3340 - phage integrase family protein 3207 71.62 +1 3534001..3534666 + 221 121595643 - Ajs_3341 - Crp/FNR family transcriptional regulator 3208 71.59 +1 3534690..3535136 + 148 121595644 - Ajs_3342 - hypothetical protein 3209 70.35 0 3535230..3535718 + 162 121595645 - Ajs_3343 - hypothetical protein 3210 69.42 0 3535899..3537134 + 411 121595646 - Ajs_3344 - Bcr/CflA subfamily drug resistance transporter 3211 68.64 0 3537411..3539288 - 625 121595647 - Ajs_3345 - DEAD/DEAH box helicase domain-containing protein 3212 63.90 0 3539571..3540149 - 192 121595648 - Ajs_3346 - oligoribonuclease 3213 68.11 0 3540188..3541501 + 437 121595649 - Ajs_3347 - Ste24 endopeptidase 3214 59.59 -1 3541498..3541836 + 112 121595650 - Ajs_3348 - pterin-4-alpha-carbinolamine dehydratase 3215 69.04 0 3541841..3542809 + 322 121595651 - Ajs_3349 - ribosome small subunit-dependent GTPase A 3216 69.30 0 3542875..3543861 - 328 121595652 - Ajs_3350 - cobalamin biosynthesis protein CbiB 3217 69.80 0 3543940..3544674 - 244 121595653 - Ajs_3351 - NUDIX hydrolase 3218 63.28 0 3544742..3545125 - 127 121595654 - Ajs_3352 - 50S ribosomal protein L19P 66.47 MEAN 4.71 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0