version 1.0
Acidovorax sp. JS42, complete genome - 1..4448856 4007 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2746 66.30 0 3032454..3032726 + 90 121595182 - Ajs_2861 - hypothetical protein 2747 69.36 0 3032723..3033724 + 333 121595183 - Ajs_2862 - cation diffusion facilitator family transporter 2748 69.30 0 3033736..3034380 + 214 121595184 - Ajs_2863 - hypothetical protein 2749 72.45 +1 3034406..3034837 + 143 121595185 - Ajs_2864 - glutathione-dependent formaldehyde-activating, GFA 2750 61.39 -1 3035182..3036261 + 359 121595186 - Ajs_2865 - integrase catalytic subunit 2751 63.27 0 3036370..3037458 + 362 121595187 - Ajs_2866 - transposase, IS4 family protein 2752 70.32 0 3037716..3038591 + 291 121595188 - Ajs_2867 - glutamate racemase 2753 68.02 0 3038659..3039174 - 171 121595189 - Ajs_2868 - hypothetical protein 2754 69.09 0 3039239..3040228 - 329 121595190 - Ajs_2869 - hypothetical protein 2755 71.06 0 3040276..3041277 - 333 121595191 - Ajs_2870 - hypothetical protein 2756 70.43 0 3041314..3042297 - 327 121595192 - Ajs_2871 - hydroxymethylglutaryl-CoA lyase 2757 70.60 0 3042294..3043514 - 406 121595193 - Ajs_2872 - L-carnitine dehydratase/bile acid-inducible protein F 2758 71.56 +1 3043635..3044534 + 299 121595194 - Ajs_2873 - LysR family transcriptional regulator 2759 66.85 0 3044531..3045643 + 370 121595195 - Ajs_2874 - hypothetical protein 2760 61.26 -1 3045810..3046364 + 184 121595196 - Ajs_2875 - elongation factor P 2761 67.85 0 3046479..3046985 - 168 121595197 - Ajs_2876 - hypothetical protein 2762 69.20 0 3047085..3049172 - 695 121595198 - Ajs_2877 - Na+/solute symporter 2763 64.78 0 3049165..3049482 - 105 121595199 - Ajs_2878 - hypothetical protein 2764 66.04 0 3049503..3051893 - 796 121595200 - Ajs_2879 - phosphoenolpyruvate synthase 2765 64.74 0 3052117..3052947 + 276 121595201 - Ajs_2880 - hypothetical protein 2766 65.83 0 3053048..3054604 - 518 121595202 - Ajs_2881 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 2767 61.88 0 3054710..3055273 - 187 121595203 - Ajs_2882 - alkyl hydroperoxide reductase subunit C 2768 59.75 -1 3055511..3055987 + 158 121595204 - Ajs_2883 - bacterioferritin 2769 62.73 0 3056292..3056621 + 109 121595205 - Ajs_2884 - flagellar transcriptional activator, FlhD subunit 2770 63.15 0 3056663..3057202 + 179 121595206 - Ajs_2885 - transcriptional activator FlhC 2771 70.51 0 3057284..3057856 - 190 121595207 - Ajs_2886 - hypothetical protein 2772 71.71 +1 3057853..3058467 - 204 121595208 - Ajs_2887 - hypothetical protein 2773 70.56 0 3058565..3060748 - 727 121595209 - Ajs_2888 - YccS/YhfK family integral membrane protein 2774 69.47 0 3060759..3063608 - 949 121595210 - Ajs_2889 - phosphoenolpyruvate carboxylase 2775 72.90 +1 3063703..3064665 + 320 121595211 - Ajs_2890 - porphobilinogen deaminase 2776 69.47 0 3064668..3065486 + 272 121595212 - Ajs_2891 - uroporphyrinogen-III synthase 2777 73.17 +1 3065476..3066552 + 358 121595213 - Ajs_2892 - protein of unknown function DUF513, hemX 2778 70.40 0 3066576..3067859 + 427 121595214 - Ajs_2893 - HemY domain-containing protein 2779 66.98 0 3067876..3068838 - 320 121595215 - Ajs_2894 - transposase IS116/IS110/IS902 family protein 2780 65.70 0 3069221..3069841 + 206 121595216 - Ajs_2895 - glyoxalase/bleomycin resistance protein/dioxygenase 2781 65.98 0 3069914..3072844 + 976 121595217 - Ajs_2896 - valyl-tRNA synthetase 2782 67.34 0 3072923..3073810 + 295 121595218 - Ajs_2897 - UDP-glucose pyrophosphorylase 2783 64.47 0 3073922..3074149 - 75 121595219 - Ajs_2898 - SirA family protein 2784 66.31 0 3074155..3074718 - 187 121595220 - Ajs_2899 - NUDIX hydrolase 2785 65.56 0 3074834..3075739 - 301 121595221 cysM Ajs_2900 - cysteine synthase B 2786 63.37 0 3076351..3076593 - 80 121595222 - Ajs_2901 - hypothetical protein 2787 67.85 0 3076590..3077852 - 420 121595223 - Ajs_2902 - conjugation TrbI family protein 2788 65.44 0 3077854..3078834 - 326 121595224 - Ajs_2903 - conjugal transfer protein TrbG/VirB9/CagX 2789 66.52 0 3078831..3079535 - 234 121595225 - Ajs_2904 - conjugal transfer protein 2790 66.82 0 3079554..3080888 - 444 121595226 - Ajs_2905 - TrbL/VirB6 plasmid conjugal transfer protein 2791 68.83 0 3080885..3081208 - 107 121595227 - Ajs_2906 - putative lipoprotein 2792 65.71 0 3081220..3081948 - 242 121595228 - Ajs_2907 - putative conjugal transfer TrbJ signal peptide protein 2793 67.00 0 3081945..3084380 - 811 121595229 - Ajs_2908 - AAA ATPase 2794 65.93 0 3084390..3084662 - 90 121595230 - Ajs_2909 - putative conjugal transfer TrbD transmembrane protein 2795 64.81 0 3084659..3085036 - 125 121595231 - Ajs_2910 - conjugal transfer protein TrbC 2796 67.83 0 3085033..3086067 - 344 121595232 - Ajs_2911 - type II secretion system protein E 2797 65.55 0 3086064..3086510 - 148 121595233 - Ajs_2912 - CopG/DNA-binding domain-containing protein 2798 66.32 0 3086507..3088504 - 665 121595234 - Ajs_2913 - TRAG family protein 2799 58.78 -1 3088740..3089018 - 92 121595235 - Ajs_2915 - putative lipoprotein 2800 65.02 0 3089151..3090665 - 504 121595236 - Ajs_2916 - transposase IS66 2801 66.03 0 3090746..3091057 - 103 121595237 - Ajs_2917 - IS66 Orf2 family protein 2802 66.23 0 3091078..3091530 - 150 121595238 - Ajs_2918 - transposase IS3/IS911 family protein 2803 60.49 -1 3091527..3092432 - 301 121595239 - Ajs_2919 - LysR family transcriptional regulator 2804 49.06 -2 3092469..3092786 - 105 121595240 - Ajs_2920 - hypothetical protein 2805 61.93 0 3092812..3093846 - 344 121595241 - Ajs_2921 - secretion protein HlyD family protein 2806 66.98 0 3094607..3095569 - 320 121595242 - Ajs_2923 - transposase IS116/IS110/IS902 family protein 2807 64.45 0 3096608..3098143 - 511 121595243 - Ajs_2924 - RND efflux system outer membrane lipoprotein 2808 60.00 -1 3098244..3099023 + 259 121595244 - Ajs_2925 - TetR family transcriptional regulator 2809 52.64 -2 3099023..3099514 + 163 121595245 - Ajs_2926 - MarR family transcriptional regulator 2810 63.96 0 3099511..3100470 + 319 121595246 - Ajs_2927 - transposase, IS4 family protein 2811 69.12 0 3103047..3103658 - 203 121595247 - Ajs_2929 - TraF peptidase 2812 70.70 0 3103655..3104200 - 181 121595248 - Ajs_2930 - hypothetical protein 2813 66.30 0 3104197..3104472 - 91 121595249 - Ajs_2931 - hypothetical protein 2814 68.54 0 3104469..3105107 - 212 121595250 - Ajs_2932 - cobyrinic acid a,c-diamide synthase 2815 67.48 0 3105361..3106218 - 285 121595251 - Ajs_2933 - putative replication initiator and transcription repressor protein 2816 68.85 0 3106245..3106565 - 106 121595252 - Ajs_2934 - hypothetical protein 2817 70.40 0 3106634..3107383 - 249 121595253 - Ajs_2935 - hypothetical protein 2818 66.95 0 3107725..3108072 - 115 121595254 - Ajs_2936 - putative lipoprotein 2819 58.16 -1 3108295..3108588 + 97 121595255 - Ajs_2937 - helix-turn-helix domain-containing protein 2820 55.84 -2 3108818..3109861 + 347 121595256 - Ajs_2938 - hypothetical protein 2821 64.44 0 3110204..3110518 - 104 121595257 - Ajs_2939 - hypothetical protein 2822 56.25 -2 3111327..3112142 - 271 121595258 - Ajs_2941 - hypothetical protein 2823 71.90 +1 3112382..3112591 - 69 121595259 - Ajs_2942 - hypothetical protein 2824 67.59 0 3112655..3114706 - 683 121595260 - Ajs_2943 - nuclease 2825 63.41 0 3114781..3115608 - 275 121595261 - Ajs_2944 - hypothetical protein 2826 59.84 -1 3116240..3116488 - 82 121595262 - Ajs_2946 - hypothetical protein 2827 57.85 -1 3116573..3117457 + 294 121595263 - Ajs_2947 - ATPase involved in chromosome partitioning-like protein 2828 57.43 -1 3117454..3117897 + 147 121595264 - Ajs_2948 - hypothetical protein 2829 61.20 -1 3118086..3118799 + 237 121595265 - Ajs_2949 - hypothetical protein 2830 55.70 -2 3118990..3120165 + 391 121595266 - Ajs_2950 - 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase 2831 58.21 -1 3120162..3120362 + 66 121595267 - Ajs_2951 - hypothetical protein 2832 56.38 -2 3120378..3122429 + 683 121595268 - Ajs_2952 - hypothetical protein 2833 56.53 -2 3122618..3123988 + 456 121595269 - Ajs_2953 - hypothetical protein 2834 57.42 -1 3123985..3124947 + 320 121595270 - Ajs_2954 - transposase, IS4 family protein 2835 47.24 -2 3125159..3125647 + 162 121595271 - Ajs_2955 - hypothetical protein 2836 46.55 -2 3125647..3126864 + 405 121595272 - Ajs_2956 - hypothetical protein 2837 62.54 0 3127020..3127334 - 104 121595273 - Ajs_2957 - putative transcriptional regulator 2838 61.82 0 3127312..3127662 - 116 121595274 - Ajs_2958 - hypothetical protein 2839 63.30 0 3127686..3129020 - 444 121595275 - Ajs_2959 - phage integrase family protein 2840 56.99 -2 3129524..3129895 + 123 121595276 - Ajs_2960 - hypothetical protein 2841 59.39 -1 3129919..3130179 + 86 121595277 - Ajs_2961 - translation initiation factor 1 2842 58.90 -1 3130256..3130564 + 102 121595278 - Ajs_2962 - RNP-1 like RNA-binding protein 2843 62.58 0 3130811..3131299 - 162 121595279 - Ajs_2963 - hypothetical protein 2844 67.94 0 3131303..3132085 - 260 121595280 - Ajs_2964 - short-chain dehydrogenase/reductase SDR 2845 63.87 0 3132097..3132633 - 178 121595281 - Ajs_2965 - putative lipoprotein 66.47 MEAN 4.71 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0