version 1.0
Acidovorax sp. JS42, complete genome - 1..4448856 4007 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2423 71.02 0 2679286..2680203 - 305 121594859 - Ajs_2519 - LysR family transcriptional regulator 2424 71.38 +1 2680417..2682114 + 565 121594860 - Ajs_2520 - acetolactate synthase 2 catalytic subunit 2425 68.69 0 2682284..2683816 - 510 121594861 - Ajs_2521 - glutamate-cysteine ligase 2426 68.75 0 2683989..2684900 - 303 121594862 - Ajs_2522 - short-chain dehydrogenase/reductase SDR 2427 67.34 0 2685104..2687617 - 837 121594863 ligD Ajs_2523 - ATP-dependent DNA ligase 2428 65.04 0 2687648..2688691 - 347 121594864 - Ajs_2524 - Ku domain-containing protein 2429 60.10 -1 2689273..2689470 - 65 121594865 - Ajs_2525 - hypothetical protein 2430 61.65 -1 2689533..2690708 - 391 121594866 - Ajs_2526 - putative transcriptional regulator 2431 58.28 -1 2690690..2693359 - 889 121594867 - Ajs_2527 - hypothetical protein 2432 63.78 0 2693356..2694567 - 403 121594868 - Ajs_2528 - hypothetical protein 2433 62.38 0 2694560..2696614 - 684 121594869 - Ajs_2529 - hypothetical protein 2434 59.06 -1 2696611..2699397 - 928 121594870 - Ajs_2530 - putative DNA methylase 2435 57.71 -1 2699456..2699656 - 66 121594871 - Ajs_2531 - phage transcriptional regulator, AlpA 2436 67.10 0 2700955..2701185 - 76 121594872 - Ajs_2534 - hypothetical protein 2437 66.67 0 2701248..2701526 - 92 121594873 - Ajs_2535 - hypothetical protein 2438 64.73 0 2701523..2703121 - 532 121594874 - Ajs_2536 - TrbL/VirB6 plasmid conjugal transfer protein 2439 62.96 0 2703118..2703387 - 89 121594875 - Ajs_2537 - putative entry/exclusion protein TrbK 2440 63.74 0 2703403..2704188 - 261 121594876 - Ajs_2538 - mating pair formation protein TrbJ 2441 61.83 0 2704430..2704801 - 123 121594877 - Ajs_2539 - OriT-binding protein, TraJ 2442 62.01 0 2705121..2705399 - 92 121594878 - Ajs_2540 - putative OriT-binding protein, TraK 2443 60.23 -1 2706113..2706982 - 289 121594879 - Ajs_2541 - plasmid and phage iteron-binding protein 2444 68.26 0 2706972..2707850 - 292 121594880 - Ajs_2542 - replication protein A 2445 60.39 -1 2707854..2708108 - 84 121594881 - Ajs_2543 - hypothetical protein 2446 58.59 -1 2708170..2709159 + 329 121594882 - Ajs_2544 - hypothetical protein 2447 62.20 0 2709239..2709484 + 81 121594883 - Ajs_2545 - phage transcriptional regulator, AlpA 2448 64.17 0 2709576..2710778 - 400 121594884 - Ajs_2546 - phage integrase family protein 2449 65.18 0 2711086..2712702 - 538 121594885 guaA Ajs_2547 - bifunctional GMP synthase/glutamine amidotransferase protein 2450 64.97 0 2712780..2714255 - 491 121594886 - Ajs_2548 - inosine-5'-monophosphate dehydrogenase 2451 65.34 0 2714256..2714858 + 200 121594887 - Ajs_2549 - hypothetical protein 2452 68.41 0 2714944..2715288 - 114 121594888 - Ajs_2550 - hypothetical protein 2453 60.32 -1 2715281..2715721 - 146 121594889 - Ajs_2551 - cyclase/dehydrase 2454 60.97 -1 2715836..2716309 + 157 121594890 smpB Ajs_2552 - SsrA-binding protein 2455 67.76 0 2716408..2716773 + 121 121594891 - Ajs_2553 - hypothetical protein 2456 67.83 0 2716790..2717305 + 171 121594892 - Ajs_2554 - ECF subfamily RNA polymerase sigma-24 factor 2457 69.88 0 2717336..2718175 + 279 121594893 - Ajs_2555 - putative transmembrane anti-sigma factor 2458 67.49 0 2718126..2719217 - 363 121594894 - Ajs_2556 - enoyl-CoA hydratase 2459 66.55 0 2719214..2720098 - 294 121594895 - Ajs_2557 - hypothetical protein 2460 64.04 0 2720307..2722136 - 609 121594896 - Ajs_2558 - GTP-binding protein TypA 2461 66.47 0 2722133..2723134 - 333 121594897 - Ajs_2559 - tRNA pseudouridine synthase B 2462 62.70 0 2723131..2723508 - 125 121594898 - Ajs_2560 - ribosome-binding factor A 2463 64.34 0 2723521..2726352 - 943 121594899 - Ajs_2561 - translation initiation factor 2 2464 61.89 0 2726377..2727861 - 494 121594900 - Ajs_2562 - NusA antitermination factor 2465 61.82 0 2727931..2728590 - 219 121594901 - Ajs_2563 - hypothetical protein 2466 57.95 -1 2728717..2729106 - 129 121594902 - Ajs_2564 - hypothetical protein 2467 63.53 0 2729117..2730391 - 424 121594903 - Ajs_2565 - cytochrome c, class I 2468 65.07 0 2730388..2731074 - 228 121594904 - Ajs_2566 - putative cytochrome c 2469 61.90 0 2731118..2731873 - 251 121594905 - Ajs_2567 - short-chain dehydrogenase/reductase SDR 2470 62.96 0 2731915..2734209 - 764 121594906 - Ajs_2568 - ribonuclease R 2471 64.27 0 2734697..2735071 + 124 121594907 - Ajs_2569 - hypothetical protein 2472 66.03 0 2735129..2735911 - 260 121594908 - Ajs_2570 - tRNA/rRNA methyltransferase (SpoU) 2473 67.94 0 2735942..2736571 - 209 121594909 - Ajs_2571 - ribonuclease H 2474 66.32 0 2736546..2737703 - 385 121594910 - Ajs_2572 - lipid-A-disaccharide synthase 2475 65.28 0 2737719..2738510 - 263 121594911 - Ajs_2573 - acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2476 61.45 -1 2738528..2738968 - 146 121594912 - Ajs_2574 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase 2477 65.65 0 2738984..2739964 - 326 121594913 - Ajs_2575 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 2478 63.03 0 2739989..2740510 - 173 121594914 - Ajs_2576 - outer membrane chaperone Skp (OmpH) 2479 62.75 0 2740510..2742807 - 765 121594915 - Ajs_2577 - surface antigen (D15) 2480 68.06 0 2742853..2744217 - 454 121594916 - Ajs_2578 - peptidase RseP 2481 67.77 0 2744337..2745509 - 390 121594917 - Ajs_2579 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2482 69.36 0 2745506..2746360 - 284 121594918 - Ajs_2580 - phosphatidate cytidylyltransferase 2483 66.94 0 2746395..2747129 - 244 121594919 - Ajs_2581 - undecaprenyl diphosphate synthase 2484 61.68 -1 2747158..2747718 - 186 121594920 - Ajs_2582 - ribosome recycling factor 2485 66.80 0 2747767..2748489 - 240 121594921 pyrH Ajs_2583 - uridylate kinase 2486 64.44 0 2748547..2749443 - 298 121594922 - Ajs_2584 - translation elongation factor Ts (EF-Ts) 2487 60.96 -1 2749553..2750305 - 250 121594923 - Ajs_2585 - SSU ribosomal protein S2P 2488 71.05 0 2750506..2751852 + 448 121594924 - Ajs_2586 - amidase 2489 73.88 +1 2751904..2753151 + 415 121594925 - Ajs_2587 - D-amino-acid dehydrogenase 2490 75.44 +1 2753452..2754978 + 508 121594926 - Ajs_2588 - carbohydrate kinase, YjeF related protein 2491 66.67 0 2755155..2755328 + 57 121594927 - Ajs_2589 - hypothetical protein 2492 75.33 +1 2755395..2756075 - 226 121594928 - Ajs_2590 - hypothetical protein 2493 70.03 0 2756072..2757082 - 336 121594929 - Ajs_2591 - hypothetical protein 2494 68.27 0 2757098..2757907 - 269 121594930 - Ajs_2592 - ABC-type transport system ipermease component 2495 69.93 0 2758017..2758475 - 152 121594931 - Ajs_2593 - MerR family transcriptional regulator 2496 72.85 +1 2758516..2760537 + 673 121594932 - Ajs_2594 - heavy metal translocating P-type ATPase 2497 72.38 +1 2760534..2760953 + 139 121594933 - Ajs_2595 - hypothetical protein 2498 68.58 0 2761101..2761727 + 208 121594934 - Ajs_2596 - hypothetical protein 2499 70.15 0 2761803..2762204 + 133 121594935 - Ajs_2597 - hypothetical protein 2500 73.56 +1 2762308..2762655 + 115 121594936 - Ajs_2598 - hypothetical protein 2501 73.57 +1 2762652..2764085 + 477 121594937 - Ajs_2599 - copper tolerance protein 2502 69.76 0 2764087..2765475 + 462 121594938 - Ajs_2600 - multicopper oxidase, type 3 2503 62.73 0 2765493..2765975 + 160 121594939 - Ajs_2601 - blue (type1) copper domain-containing protein 2504 68.69 0 2766010..2766504 + 164 121594940 - Ajs_2602 - hypothetical protein 2505 67.15 0 2766501..2766911 + 136 121594941 - Ajs_2603 - hypothetical protein 2506 71.15 0 2766967..2769174 + 735 121594942 - Ajs_2604 - heavy metal translocating P-type ATPase 2507 73.67 +1 2769230..2770243 + 337 121594943 - Ajs_2605 - peptidase S58, DmpA 2508 67.94 0 2770246..2771583 + 445 121594944 - Ajs_2606 - TRAP transporter solute receptor TAXI family protein 2509 67.07 0 2771613..2773838 - 741 121594945 - Ajs_2607 - hypothetical protein 2510 59.94 -1 2773896..2775635 - 579 121594946 - Ajs_2608 - putative ABC transporter ATP-binding protein 2511 68.17 0 2775814..2777547 + 577 121594947 - Ajs_2609 - DEAD/DEAH box helicase domain-containing protein 2512 66.94 0 2777684..2779504 + 606 121594948 - Ajs_2610 - peptidase M14, carboxypeptidase A 2513 64.49 0 2779968..2780519 - 183 121594949 - Ajs_2611 - integrase catalytic subunit 2514 61.39 -1 2781490..2782569 - 359 121594950 - Ajs_2613 - integrase catalytic subunit 2515 64.27 0 2784111..2784569 - 152 121594951 - Ajs_2614 - hypothetical protein 2516 64.63 0 2784562..2785149 - 195 121594952 - Ajs_2615 - DNA polymerase beta subunit 2517 63.29 0 2785296..2786774 - 492 121594953 - Ajs_2616 - N-6 DNA methylase 2518 61.11 -1 2786847..2787404 - 185 121594954 - Ajs_2617 - hypothetical protein 2519 62.88 0 2787465..2789918 - 817 121594955 - Ajs_2618 - EcoEI R domain-containing protein 2520 60.19 -1 2790069..2790593 + 174 121594956 - Ajs_2619 - hypothetical protein 2521 61.21 -1 2791280..2793202 - 640 121594957 - Ajs_2620 - PpiC-type peptidyl-prolyl cis-trans isomerase 2522 54.95 -2 2793352..2793624 - 90 121594958 - Ajs_2621 - histone family protein DNA-binding protein 66.47 MEAN 4.71 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0