version 1.0
Acidovorax sp. JS42, complete genome - 1..4448856 4007 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2309 62.89 0 2557469..2557759 + 96 121594745 - Ajs_2404 - SWIB/MDM2 domain-containing protein 2310 63.00 0 2557946..2558218 + 90 121594746 - Ajs_2405 - BFD/(2Fe-2S)-binding domain-containing protein 2311 69.66 0 2558326..2559027 + 233 121594747 - Ajs_2406 - TonB family protein 2312 64.99 0 2559045..2559761 + 238 121594748 - Ajs_2407 - MotA/TolQ/ExbB proton channel 2313 65.69 0 2559768..2560178 + 136 121594749 - Ajs_2408 - biopolymer transport protein ExbD/TolR 2314 68.10 0 2560375..2560584 + 69 121594750 - Ajs_2409 - hypothetical protein 2315 68.38 0 2560806..2561213 - 135 121594751 - Ajs_2410 - hypothetical protein 2316 65.66 0 2561441..2562133 + 230 121594752 - Ajs_2411 - hypothetical protein 2317 70.28 0 2562247..2562633 + 128 121594753 - Ajs_2412 - hypothetical protein 2318 67.63 0 2562710..2564158 - 482 121594754 rumA Ajs_2413 - 23S rRNA 5-methyluridine methyltransferase 2319 67.58 0 2564208..2564534 - 108 121594755 - Ajs_2414 - hypothetical protein 2320 66.82 0 2564563..2565231 + 222 121594756 - Ajs_2415 - ECF subfamily RNA polymerase sigma-24 factor 2321 69.46 0 2565348..2566169 + 273 121594757 - Ajs_2416 - hypothetical protein 2322 66.88 0 2566306..2566785 + 159 121594758 - Ajs_2417 - hypothetical protein 2323 61.39 -1 2566862..2567392 + 176 121594759 - Ajs_2418 - hypothetical protein 2324 63.33 0 2567341..2567820 - 159 121594760 - Ajs_2419 - AsnC family transcriptional regulator 2325 71.87 +1 2568027..2571602 + 1191 121594761 - Ajs_2420 - delta-1-pyrroline-5-carboxylate dehydrogenase / L-proline dehydrogenase 2326 72.28 +1 2571668..2572273 - 201 121594762 - Ajs_2421 - 2',5' RNA ligase 2327 69.48 0 2572688..2573470 + 260 121594763 - Ajs_2422 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 2328 72.30 +1 2573488..2574534 + 348 121594764 - Ajs_2423 - polysulphide reductase, NrfD 2329 69.05 0 2574635..2577829 + 1064 121594765 - Ajs_2424 - molydopterin dinucleotide-binding region 2330 44.30 -2 2578382..2579275 + 297 121594766 - Ajs_2425 - hypothetical protein 2331 46.99 -2 2579272..2581842 + 856 121594767 - Ajs_2426 - DEAD/DEAH box helicase domain-containing protein 2332 48.00 -2 2581835..2582134 + 99 121594768 - Ajs_2427 - hypothetical protein 2333 73.36 +1 2582635..2585202 - 855 121594769 - Ajs_2428 - helicase c2 2334 71.95 +1 2585199..2586884 - 561 121594770 - Ajs_2429 - hypothetical protein 2335 61.58 -1 2586950..2587951 - 333 121594771 - Ajs_2430 - hypothetical protein 2336 69.03 0 2588090..2588767 + 225 121594772 - Ajs_2431 - two component transcriptional regulator 2337 69.68 0 2588764..2590224 + 486 121594773 - Ajs_2432 - integral membrane sensor signal transduction histidine kinase 2338 71.70 +1 2590232..2591065 + 277 121594774 - Ajs_2433 - redoxin domain-containing protein 2339 67.88 0 2591104..2592006 - 300 121594775 - Ajs_2434 - beta-lactamase domain-containing protein 2340 64.20 0 2592114..2592437 + 107 121594776 - Ajs_2435 - ArsR family transcriptional regulator 2341 70.05 0 2592442..2592885 + 147 121594777 - Ajs_2436 - protein of unknown function DUF395, YeeE/YedE 2342 66.43 0 2592908..2593330 + 140 121594778 - Ajs_2437 - protein of unknown function DUF395, YeeE/YedE 2343 66.51 0 2593428..2594051 + 207 121594779 - Ajs_2438 - hypothetical protein 2344 68.98 0 2594056..2594703 - 215 121594780 - Ajs_2439 - hypothetical protein 2345 62.52 0 2594959..2595657 - 232 121594781 - Ajs_2440 - negative transcriptional regulator 2346 63.40 0 2595829..2596410 - 193 121594782 - Ajs_2441 - TetR family transcriptional regulator 2347 63.28 0 2596517..2597845 + 442 121594783 - Ajs_2442 - beta-ketoacyl synthase 2348 65.98 0 2597939..2599534 + 531 121594784 - Ajs_2443 - integrase catalytic subunit 2349 64.97 0 2599531..2600295 + 254 121594785 - Ajs_2444 - IstB ATP binding domain-containing protein 2350 55.10 -2 2600249..2600689 - 146 121594786 - Ajs_2445 - hypothetical protein 2351 53.03 -2 2600829..2601488 - 219 121594787 - Ajs_2446 - hypothetical protein 2352 53.57 -2 2601481..2602572 - 363 121594788 - Ajs_2447 - hypothetical protein 2353 54.03 -2 2602657..2603685 - 342 121594789 - Ajs_2448 - hypothetical protein 2354 56.26 -2 2603815..2604804 - 329 121594790 - Ajs_2449 - hypothetical protein 2355 57.41 -1 2604823..2605200 - 125 121594791 - Ajs_2450 - hypothetical protein 2356 57.51 -1 2605665..2606975 + 436 121594792 - Ajs_2451 - hypothetical protein 2357 56.34 -2 2607034..2608137 - 367 121594793 - Ajs_2452 - hypothetical protein 2358 58.21 -1 2608143..2609372 - 409 121594794 - Ajs_2453 - helix-turn-helix domain-containing protein 2359 54.25 -2 2609369..2609674 - 101 121594795 - Ajs_2454 - hypothetical protein 2360 65.02 0 2609863..2611377 - 504 121594796 - Ajs_2455 - transposase IS66 2361 66.03 0 2611458..2611769 - 103 121594797 - Ajs_2456 - IS66 Orf2 family protein 2362 66.23 0 2611790..2612242 - 150 121594798 - Ajs_2457 - transposase IS3/IS911 family protein 2363 62.86 0 2612889..2614649 - 586 121594799 - Ajs_2458 - UvrD/REP helicase 2364 63.92 0 2614646..2616466 - 606 121594800 - Ajs_2459 - hypothetical protein 2365 55.23 -2 2616693..2617934 - 413 121594801 - Ajs_2460 - phage integrase family protein 2366 59.73 -1 2618531..2619208 - 225 121594802 - Ajs_2461 - phosphoglycolate phosphatase 2367 61.76 0 2619205..2619918 - 237 121594803 - Ajs_2462 - 3-demethylubiquinone-9 3-methyltransferase 2368 60.27 -1 2619998..2620654 - 218 121594804 - Ajs_2463 - OmpA/MotB domain-containing protein 2369 64.57 0 2620848..2623514 + 888 121594805 - Ajs_2464 - DNA gyrase subunit A 2370 67.47 0 2623578..2624693 + 371 121594806 - Ajs_2465 - phosphoserine aminotransferase 2371 69.09 0 2624810..2625925 + 371 121594807 - Ajs_2466 - chorismate mutase / prephenate dehydratase 2372 68.93 0 2625935..2626819 + 294 121594808 - Ajs_2467 - prephenate dehydrogenase 2373 68.79 0 2626819..2628840 + 673 121594809 - Ajs_2468 - bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase 2374 62.99 0 2629014..2630699 + 561 121594810 rpsA Ajs_2469 - 30S ribosomal protein S1 2375 66.03 0 2630821..2631132 + 103 121594811 - Ajs_2470 - integration host factor, beta subunit 2376 69.67 0 2631262..2631594 + 110 121594812 - Ajs_2471 - hypothetical protein 2377 70.38 0 2631584..2632741 + 385 121594813 - Ajs_2472 - hypothetical protein 2378 73.62 +1 2632750..2633094 + 114 121594814 - Ajs_2473 - hypothetical protein 2379 68.09 0 2633206..2636160 + 984 121594815 - Ajs_2474 - putative monovalent cation/H+ antiporter subunit A 2380 65.57 0 2636160..2636525 + 121 121594816 - Ajs_2475 - putative monovalent cation/H+ antiporter subunit C 2381 69.37 0 2636522..2638258 + 578 121594817 - Ajs_2476 - putative monovalent cation/H+ antiporter subunit D 2382 64.63 0 2638255..2638746 + 163 121594818 - Ajs_2477 - putative monovalent cation/H+ antiporter subunit E 2383 64.18 0 2638743..2639024 + 93 121594819 - Ajs_2478 - multiple resistance and pH regulation protein F 2384 67.75 0 2639021..2639389 + 122 121594820 - Ajs_2479 - Na+/H+ antiporter subunit 2385 68.88 0 2639460..2643212 - 1250 121594821 - Ajs_2480 - 5-oxoprolinase (ATP-hydrolyzing) 2386 70.07 0 2643299..2645122 + 607 121594822 - Ajs_2481 - hypothetical protein 2387 68.39 0 2645168..2645746 - 192 121594823 - Ajs_2482 - putative transcriptional regulator 2388 66.16 0 2645950..2646927 + 325 121594824 - Ajs_2483 - TRAP dicarboxylate transporter- DctP subunit 2389 69.02 0 2646965..2647474 + 169 121594825 - Ajs_2484 - tripartite ATP-independent periplasmic transporter DctQ 2390 67.20 0 2647490..2648794 + 434 121594826 - Ajs_2485 - TRAP dicarboxylate transporter, DctM subunit 2391 71.46 +1 2648837..2649232 + 131 121594827 - Ajs_2486 - camphor resistance protein CrcB 2392 65.62 0 2649364..2650227 + 287 121594828 - Ajs_2487 - hypothetical protein 2393 72.39 +1 2650282..2651469 - 395 121594829 - Ajs_2488 - major facilitator superfamily transporter 2394 68.61 0 2651471..2653171 - 566 121594830 - Ajs_2489 - hypothetical protein 2395 68.60 0 2653235..2654215 - 326 121594831 - Ajs_2490 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 2396 66.24 0 2654295..2655710 - 471 121594832 - Ajs_2491 - putative transmembrane protein 2397 64.91 0 2655775..2656971 - 398 121594833 - Ajs_2492 - nicotinate phosphoribosyltransferase 2398 66.46 0 2657151..2657639 - 162 121594834 - Ajs_2493 - thioesterase superfamily protein 2399 65.07 0 2657909..2658472 + 187 121594835 - Ajs_2494 - phasin family protein 2400 72.50 +1 2660419..2661309 + 296 121594836 - Ajs_2496 - peptidase M23B 2401 73.89 +1 2661306..2661956 + 216 121594837 - Ajs_2497 - ribosomal large subunit pseudouridine synthase E 2402 75.12 +1 2662059..2663099 + 346 121594838 - Ajs_2498 - Sel1 domain-containing protein 2403 72.74 +1 2663161..2663835 - 224 121594839 - Ajs_2499 - hypothetical protein 2404 71.10 0 2663924..2664826 - 300 121594840 - Ajs_2500 - transporter DMT superfamily protein 2405 74.60 +1 2665191..2665808 + 205 121594841 - Ajs_2501 - nuclease 2406 70.46 0 2665849..2666796 - 315 121594842 - Ajs_2502 - phosphoesterase, DHHA1 2407 70.37 0 2666935..2667204 + 89 121594843 - Ajs_2503 - hypothetical protein 2408 68.40 0 2667313..2667600 + 95 121594844 - Ajs_2504 - hypothetical protein 66.47 MEAN 4.71 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0