version 1.0
Acidovorax sp. JS42, complete genome - 1..4448856 4007 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2237 72.39 +1 2474422..2475975 + 517 121594673 - Ajs_2332 - PepSY-associated TM helix domain-containing protein 2238 72.17 +1 2476001..2476672 + 223 121594674 - Ajs_2333 - glutaredoxin 2239 64.00 0 2476759..2477283 - 174 121594675 - Ajs_2334 - disulphide bond formation protein DsbB 2240 66.93 0 2477346..2478473 - 375 121594676 - Ajs_2335 - sulfate ABC transporter, ATPase subunit 2241 67.76 0 2478485..2479396 - 303 121594677 - Ajs_2336 - sulfate ABC transporter, inner membrane subunit CysW 2242 63.50 0 2479393..2480244 - 283 121594678 - Ajs_2337 - sulfate ABC transporter, inner membrane subunit CysT 2243 64.68 0 2480392..2481399 - 335 121594679 - Ajs_2338 - sulfate ABC transporter, periplasmic sulfate-binding protein 2244 71.59 +1 2481680..2482633 - 317 121594680 - Ajs_2339 - LysR family transcriptional regulator 2245 69.43 0 2482761..2483411 + 216 121594681 - Ajs_2340 - (Acyl-carrier-protein) phosphodiesterase 2246 65.94 0 2483535..2484086 - 183 121594682 - Ajs_2341 - NADPH-dependent FMN reductase 2247 65.04 0 2484253..2485053 - 266 121594683 - Ajs_2342 - YaeC family lipoprotein 2248 71.27 +1 2485258..2486364 - 368 121594684 - Ajs_2343 - hypothetical protein 2249 67.87 0 2486526..2487191 - 221 121594685 - Ajs_2344 - binding-protein-dependent transport systems inner membrane component 2250 68.86 0 2487202..2488248 - 348 121594686 - Ajs_2345 - ABC transporter related 2251 69.26 0 2488789..2490021 + 410 121594687 - Ajs_2346 - major facilitator superfamily transporter 2252 67.16 0 2490031..2490438 - 135 121594688 - Ajs_2347 - membrane protein-like protein 2253 72.08 +1 2490503..2491093 - 196 121594689 recR Ajs_2348 - recombination protein RecR 2254 63.06 0 2491252..2491584 - 110 121594690 - Ajs_2349 - hypothetical protein 2255 69.90 0 2491615..2493654 - 679 121594691 - Ajs_2350 - DNA polymerase III, subunits gamma and tau 2256 68.18 0 2493709..2494170 + 153 121594692 - Ajs_2351 - hypothetical protein 2257 69.10 0 2494519..2495217 + 232 121594693 - Ajs_2352 - hypothetical protein 2258 70.16 0 2495303..2496646 - 447 121594694 - Ajs_2353 - hypothetical protein 2259 67.67 0 2496660..2497355 - 231 121594695 - Ajs_2354 - methyltransferase type 11 2260 71.29 +1 2497459..2500764 - 1101 121594696 - Ajs_2355 - UvrD/REP helicase 2261 73.16 +1 2500757..2503327 - 856 121594697 - Ajs_2356 - exonuclease-like protein 2262 61.86 0 2503443..2503775 + 110 121594698 - Ajs_2357 - thioredoxin 2263 61.68 -1 2504015..2505277 + 420 121594699 rho Ajs_2358 - transcription termination factor Rho 2264 71.06 0 2505494..2506972 + 492 121594700 - Ajs_2359 - RND efflux system outer membrane lipoprotein 2265 71.90 +1 2506993..2508063 + 356 121594701 - Ajs_2360 - secretion protein HlyD family protein 2266 67.77 0 2508088..2510898 + 936 121594702 - Ajs_2361 - ABC transporter related 2267 67.19 0 2510902..2512050 + 382 121594703 - Ajs_2362 - ABC-2 type transporter 2268 56.86 -2 2512148..2512402 + 84 121594704 - Ajs_2363 - 50S ribosomal protein L31P 2269 71.44 +1 2512553..2514250 + 565 121594705 - Ajs_2364 - putative inner membrane transmembrane protein 2270 67.54 0 2514250..2515626 + 458 121594706 - Ajs_2365 - MATE efflux family protein 2271 68.81 0 2515571..2516968 - 465 121594707 - Ajs_2366 - multi-sensor signal transduction histidine kinase 2272 65.96 0 2517055..2517762 - 235 121594708 - Ajs_2367 - two component transcriptional regulator 2273 62.39 0 2517779..2518480 - 233 121594709 - Ajs_2368 - phosphate uptake regulator, PhoU 2274 61.30 -1 2518495..2519277 - 260 121594710 - Ajs_2369 - phosphate ABC transporter, ATPase subunit 2275 63.49 0 2519300..2520181 - 293 121594711 pstA Ajs_2370 - phosphate transporter permease subunit 2276 63.51 0 2520178..2521191 - 337 121594712 - Ajs_2371 - phosphate ABC transporter, inner membrane subunit PstC 2277 61.00 -1 2521270..2522310 - 346 121594713 - Ajs_2372 - phosphate ABC transporter, periplasmic phosphate-binding protein 2278 63.82 0 2522511..2523002 + 163 121594714 - Ajs_2373 - beta-Ig-H3/fasciclin 2279 65.96 0 2523034..2524167 + 377 121594715 - Ajs_2374 - twin-arginine translocation pathway signal 2280 64.10 0 2524252..2525733 + 493 121594716 - Ajs_2375 - Ppx/GppA phosphatase 2281 60.46 -1 2525799..2526233 + 144 121594717 - Ajs_2376 - hypothetical protein 2282 64.09 0 2526285..2526749 - 154 121594718 - Ajs_2377 - phosphohistidine phosphatase, SixA 2283 63.67 0 2526746..2528917 - 723 121594719 - Ajs_2378 - polyphosphate kinase 2284 64.99 0 2529033..2529869 - 278 121594720 - Ajs_2379 - ornithine-acyl[acyl carrier protein] N-acyltransferase 2285 65.17 0 2530052..2532322 + 756 121594721 - Ajs_2380 - diguanylate cyclase/phosphodiesterase 2286 66.82 0 2532390..2533724 - 444 121594722 - Ajs_2381 - phosphoglucosamine mutase 2287 66.55 0 2533737..2534588 - 283 121594723 - Ajs_2382 - dihydropteroate synthase 2288 62.81 0 2534660..2536579 - 639 121594724 - Ajs_2383 - FtsH peptidase 2289 61.76 0 2536723..2537436 - 237 121594725 - Ajs_2384 - ribosomal RNA methyltransferase RrmJ/FtsJ 2290 62.24 0 2537463..2537936 + 157 121594726 - Ajs_2385 - hypothetical protein 2291 63.65 0 2537948..2538709 + 253 121594727 - Ajs_2386 - hypothetical protein 2292 65.99 0 2538767..2539648 - 293 121594728 - Ajs_2387 - hypothetical protein 2293 62.32 0 2539655..2540068 - 137 121594729 - Ajs_2388 - hypothetical protein 2294 66.25 0 2540080..2540556 - 158 121594730 - Ajs_2389 - transcription elongation factor GreA 2295 64.45 0 2540684..2543845 - 1053 121594731 - Ajs_2390 - carbamoyl-phosphate synthase large subunit 2296 62.69 0 2543946..2544347 - 133 121594732 - Ajs_2391 - hypothetical protein 2297 64.79 0 2544369..2545541 - 390 121594733 - Ajs_2392 - carbamoyl-phosphate synthase small subunit 2298 61.31 -1 2545884..2546312 - 142 121594734 - Ajs_2393 - MerR family transcriptional regulator 2299 61.54 -1 2546413..2546763 - 116 121594735 - Ajs_2394 - histone family protein DNA-binding protein 2300 67.28 0 2546760..2549204 - 814 121594736 pheT Ajs_2395 - phenylalanyl-tRNA synthetase subunit beta 2301 66.29 0 2549326..2550378 - 350 121594737 - Ajs_2396 - phenylalanyl-tRNA synthetase, alpha subunit 2302 62.78 0 2550481..2550840 - 119 121594738 rplT Ajs_2397 - 50S ribosomal protein L20 2303 56.86 -2 2550867..2551070 - 67 121594739 - Ajs_2398 - 50S ribosomal protein L35P 2304 61.17 -1 2551244..2551861 - 205 121594740 - Ajs_2399 - translation initiation factor 3 2305 61.04 -1 2551921..2553840 - 639 121594741 - Ajs_2400 - Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase 2306 62.01 0 2554123..2555454 - 443 121594742 - Ajs_2401 - isocitrate lyase 2307 63.67 0 2555728..2556729 + 333 121594743 - Ajs_2402 - hypothetical protein 2308 68.05 0 2556739..2557245 - 168 121594744 - Ajs_2403 - ribonuclease activity regulator protein RraA 2309 62.89 0 2557469..2557759 + 96 121594745 - Ajs_2404 - SWIB/MDM2 domain-containing protein 2310 63.00 0 2557946..2558218 + 90 121594746 - Ajs_2405 - BFD/(2Fe-2S)-binding domain-containing protein 2311 69.66 0 2558326..2559027 + 233 121594747 - Ajs_2406 - TonB family protein 2312 64.99 0 2559045..2559761 + 238 121594748 - Ajs_2407 - MotA/TolQ/ExbB proton channel 2313 65.69 0 2559768..2560178 + 136 121594749 - Ajs_2408 - biopolymer transport protein ExbD/TolR 2314 68.10 0 2560375..2560584 + 69 121594750 - Ajs_2409 - hypothetical protein 2315 68.38 0 2560806..2561213 - 135 121594751 - Ajs_2410 - hypothetical protein 2316 65.66 0 2561441..2562133 + 230 121594752 - Ajs_2411 - hypothetical protein 2317 70.28 0 2562247..2562633 + 128 121594753 - Ajs_2412 - hypothetical protein 2318 67.63 0 2562710..2564158 - 482 121594754 rumA Ajs_2413 - 23S rRNA 5-methyluridine methyltransferase 2319 67.58 0 2564208..2564534 - 108 121594755 - Ajs_2414 - hypothetical protein 2320 66.82 0 2564563..2565231 + 222 121594756 - Ajs_2415 - ECF subfamily RNA polymerase sigma-24 factor 2321 69.46 0 2565348..2566169 + 273 121594757 - Ajs_2416 - hypothetical protein 2322 66.88 0 2566306..2566785 + 159 121594758 - Ajs_2417 - hypothetical protein 2323 61.39 -1 2566862..2567392 + 176 121594759 - Ajs_2418 - hypothetical protein 2324 63.33 0 2567341..2567820 - 159 121594760 - Ajs_2419 - AsnC family transcriptional regulator 2325 71.87 +1 2568027..2571602 + 1191 121594761 - Ajs_2420 - delta-1-pyrroline-5-carboxylate dehydrogenase / L-proline dehydrogenase 2326 72.28 +1 2571668..2572273 - 201 121594762 - Ajs_2421 - 2',5' RNA ligase 2327 69.48 0 2572688..2573470 + 260 121594763 - Ajs_2422 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 2328 72.30 +1 2573488..2574534 + 348 121594764 - Ajs_2423 - polysulphide reductase, NrfD 2329 69.05 0 2574635..2577829 + 1064 121594765 - Ajs_2424 - molydopterin dinucleotide-binding region 2330 44.30 -2 2578382..2579275 + 297 121594766 - Ajs_2425 - hypothetical protein 2331 46.99 -2 2579272..2581842 + 856 121594767 - Ajs_2426 - DEAD/DEAH box helicase domain-containing protein 2332 48.00 -2 2581835..2582134 + 99 121594768 - Ajs_2427 - hypothetical protein 2333 73.36 +1 2582635..2585202 - 855 121594769 - Ajs_2428 - helicase c2 2334 71.95 +1 2585199..2586884 - 561 121594770 - Ajs_2429 - hypothetical protein 2335 61.58 -1 2586950..2587951 - 333 121594771 - Ajs_2430 - hypothetical protein 2336 69.03 0 2588090..2588767 + 225 121594772 - Ajs_2431 - two component transcriptional regulator 66.47 MEAN 4.71 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0