version 1.0
Acidovorax sp. JS42, complete genome - 1..4448856 4007 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2027 65.52 0 2232370..2233242 + 290 121594463 - Ajs_2113 - extracellular solute-binding protein 2028 65.22 0 2233314..2234006 + 230 121594464 - Ajs_2114 - polar amino acid ABC transporter, inner membrane subunit 2029 70.91 0 2234009..2234503 - 164 121594465 - Ajs_2115 - hypothetical protein 2030 70.81 0 2234769..2235323 + 184 121594466 - Ajs_2116 - hypothetical protein 2031 64.30 0 2235345..2235725 - 126 121594467 - Ajs_2117 - proline hydroxylase-like protein 2032 65.25 0 2237225..2238427 - 400 121594468 - Ajs_2119 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 2033 63.70 0 2238621..2239160 + 179 121594469 - Ajs_2120 - BadM/Rrf2 family transcriptional regulator 2034 64.28 0 2239352..2240944 - 530 121594470 - Ajs_2121 - putative transposase 2035 63.27 0 2240957..2242045 - 362 121594471 - Ajs_2122 - transposase, IS4 family protein 2036 67.57 0 2242333..2244216 - 627 121594472 - Ajs_2123 - dihydrolipoamide dehydrogenase 2037 67.19 0 2244233..2245936 - 567 121594473 - Ajs_2124 - pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 2038 64.92 0 2245956..2248652 - 898 121594474 aceE Ajs_2125 - pyruvate dehydrogenase subunit E1 2039 67.26 0 2248822..2251368 + 848 121594475 - Ajs_2126 - multi-sensor signal transduction histidine kinase 2040 61.88 0 2251365..2251991 + 208 121594476 - Ajs_2127 - two component LuxR family transcriptional regulator 2041 64.43 0 2252070..2252918 + 282 121594477 - Ajs_2128 - methenyltetrahydrofolate cyclohydrolase 2042 67.26 0 2253006..2255039 + 677 121594478 - Ajs_2129 - oligopeptidase A 2043 68.65 0 2255154..2255810 + 218 121594479 - Ajs_2130 - glutaredoxin 2044 65.07 0 2255861..2256550 - 229 121594480 - Ajs_2131 - ribose-5-phosphate isomerase A 2045 66.67 0 2256586..2257641 + 351 121594481 - Ajs_2132 - dihydroorotate dehydrogenase 2 2046 73.46 +1 2257699..2258022 - 107 121594482 - Ajs_2133 - hypothetical protein 2047 64.65 0 2258019..2258414 - 131 121594483 - Ajs_2134 - hypothetical protein 2048 62.73 0 2258482..2258862 - 126 121594484 - Ajs_2135 - protein of unknown function DUF883, ElaB 2049 66.22 0 2258921..2260036 - 371 121594485 - Ajs_2136 - FAD dependent oxidoreductase 2050 64.90 0 2260054..2261130 - 358 121594486 - Ajs_2137 - histone deacetylase superfamily protein 2051 62.18 0 2261438..2262151 - 237 121594487 - Ajs_2138 - DNA polymerase III, epsilon subunit 2052 61.36 -1 2262151..2262489 - 112 121594488 - Ajs_2139 - ferredoxin, 2Fe-2S type, ISC system 2053 66.35 0 2262523..2264391 - 622 121594489 hscA Ajs_2140 - chaperone protein HscA 2054 64.74 0 2264458..2264976 - 172 121594490 - Ajs_2141 - co-chaperone Hsc20 2055 58.95 -1 2265045..2265368 - 107 121594491 - Ajs_2142 - iron-sulfur cluster assembly protein IscA 2056 61.94 0 2265374..2265775 - 133 121594492 - Ajs_2143 - FeS cluster assembly scaffold IscU 2057 61.92 0 2265813..2267033 - 406 121594493 - Ajs_2144 - cysteine desulfurase IscS 2058 61.27 -1 2267138..2267674 - 178 121594494 - Ajs_2145 - BadM/Rrf2 family transcriptional regulator 2059 64.55 0 2268368..2269594 + 408 121594495 - Ajs_2147 - transposase IS116/IS110/IS902 family protein 2060 67.97 0 2269703..2270929 - 408 121594496 - Ajs_2148 - transposase, IS204/IS1001/IS1096/IS1165 family protein 2061 62.82 0 2270922..2272013 - 363 121594497 - Ajs_2149 - putative transposase 2062 62.57 0 2272136..2274232 - 698 121594498 - Ajs_2150 - excinuclease ABC subunit B 2063 65.33 0 2274341..2275537 + 398 121594499 - Ajs_2151 - aromatic amino acid aminotransferase 2064 64.97 0 2275691..2277460 + 589 121594500 - Ajs_2152 - methyl-accepting chemotaxis sensory transducer 2065 71.22 +1 2277463..2278341 + 292 121594501 - Ajs_2153 - L-carnitine dehydratase/bile acid-inducible protein F 2066 66.87 0 2278349..2278843 + 164 121594502 - Ajs_2154 - hypothetical protein 2067 57.81 -1 2281797..2283050 + 417 121594503 - Ajs_2156 - transposase, mutator type 2068 61.13 -1 2283178..2284206 + 342 121594504 - Ajs_2157 - integrase catalytic subunit 2069 60.98 -1 2284331..2284963 + 210 121594505 - Ajs_2158 - hypothetical protein 2070 66.67 0 2285016..2285273 + 85 121594506 - Ajs_2159 - hypothetical protein 2071 60.48 -1 2285407..2286117 + 236 121594507 - Ajs_2160 - methyltransferase type 11 2072 66.16 0 2286208..2287785 + 525 121594508 - Ajs_2161 - beta-phosphoglucomutase family hydrolase 2073 65.47 0 2287782..2290205 + 807 121594509 - Ajs_2162 - trehalose 6-phosphate phosphorylase 2074 64.99 0 2290268..2291281 + 337 121594510 - Ajs_2163 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 2075 67.40 0 2291290..2293728 + 812 121594511 - Ajs_2164 - phosphoenolpyruvate synthase 2076 64.27 0 2293773..2294813 + 346 121594512 - Ajs_2165 - glyceraldehyde-3-phosphate dehydrogenase 2077 64.90 0 2296121..2296687 + 188 121594513 - Ajs_2168 - TetR family transcriptional regulator 2078 67.34 0 2296764..2297501 - 245 121594514 - Ajs_2169 - LysR family transcriptional regulator 2079 67.48 0 2297676..2298293 + 205 121594515 - Ajs_2170 - hypothetical protein 2080 66.73 0 2298290..2299960 + 556 121594516 - Ajs_2171 - integrase catalytic subunit 2081 65.77 0 2299957..2300853 + 298 121594517 - Ajs_2172 - TniB family protein 2082 64.32 0 2300850..2302343 + 497 121594518 - Ajs_2173 - hypothetical protein 2083 62.33 0 2302481..2302780 + 99 121594519 - Ajs_2174 - XRE family transcriptional regulator 2084 68.29 0 2302807..2304651 - 614 121594520 - Ajs_2175 - relaxase 2085 66.45 0 2304854..2305774 - 306 121594521 - Ajs_2176 - hypothetical protein 2086 64.98 0 2305767..2306594 - 275 121594522 - Ajs_2177 - hypothetical protein 2087 68.29 0 2306755..2307123 + 122 121594523 - Ajs_2178 - hypothetical protein 2088 63.98 0 2307140..2308663 - 507 121594524 - Ajs_2179 - hypothetical protein 2089 71.47 +1 2308679..2309032 - 117 121594525 - Ajs_2180 - hypothetical protein 2090 68.94 0 2309029..2310435 - 468 121594526 - Ajs_2181 - hypothetical protein 2091 67.30 0 2310446..2311390 - 314 121594527 - Ajs_2182 - hypothetical protein 2092 71.33 +1 2311387..2311836 - 149 121594528 - Ajs_2183 - hypothetical protein 2093 65.86 0 2312005..2312499 - 164 121594529 - Ajs_2184 - DNA repair protein RadC 2094 70.16 0 2312695..2313438 - 247 121594530 - Ajs_2185 - hypothetical protein 2095 67.95 0 2313452..2316340 - 962 121594531 - Ajs_2186 - hypothetical protein 2096 72.41 +1 2316340..2316774 - 144 121594532 - Ajs_2187 - hypothetical protein 2097 68.55 0 2316755..2318188 - 477 121594533 - Ajs_2188 - hypothetical protein 2098 72.57 +1 2318178..2319092 - 304 121594534 - Ajs_2189 - hypothetical protein 2099 68.11 0 2319089..2319781 - 230 121594535 - Ajs_2190 - hypothetical protein 2100 72.51 +1 2319778..2320188 - 136 121594536 - Ajs_2191 - hypothetical protein 2101 67.75 0 2320201..2320569 - 122 121594537 - Ajs_2192 - hypothetical protein 2102 67.08 0 2320592..2320831 - 79 121594538 - Ajs_2193 - hypothetical protein 2103 71.67 +1 2320828..2321187 - 119 121594539 - Ajs_2194 - hypothetical protein 2104 57.28 -1 2321480..2321692 + 70 121594540 - Ajs_2195 - phage transcriptional regulator, AlpA 2105 59.40 -1 2321702..2322802 + 366 121594541 - Ajs_2196 - DNA-cytosine methyltransferase 2106 62.09 0 2322823..2323281 + 152 121594542 - Ajs_2197 - putative very short patch repair protein 2107 62.46 0 2323302..2326442 + 1046 121594543 - Ajs_2198 - helicase domain-containing protein 2108 63.75 0 2326439..2328979 + 846 121594544 - Ajs_2199 - hypothetical protein 2109 67.97 0 2328992..2330218 - 408 121594545 - Ajs_2200 - transposase, IS204/IS1001/IS1096/IS1165 family protein 2110 59.06 -1 2330411..2331949 + 512 121594546 - Ajs_2201 - hypothetical protein 2111 59.87 -1 2331946..2333901 + 651 121594547 - Ajs_2202 - DNA mismatch repair ATPase-like protein 2112 63.31 0 2333914..2337933 + 1339 121594548 - Ajs_2203 - helicase domain-containing protein 2113 61.77 0 2337936..2339795 + 619 121594549 - Ajs_2204 - hypothetical protein 2114 59.84 -1 2339797..2340558 + 253 121594550 - Ajs_2205 - phospholipase D/transphosphatidylase 2115 57.72 -1 2340610..2341302 - 230 121594551 - Ajs_2206 - hypothetical protein 2116 67.47 0 2341585..2342334 - 249 121594552 - Ajs_2207 - hypothetical protein 2117 67.45 0 2342331..2344487 - 718 121594553 - Ajs_2208 - hypothetical protein 2118 72.66 +1 2344496..2345029 - 177 121594554 - Ajs_2209 - hypothetical protein 2119 73.11 +1 2345026..2345646 - 206 121594555 - Ajs_2210 - lytic transglycosylase, catalytic 2120 73.33 +1 2345631..2346350 - 239 121594556 - Ajs_2211 - putative secreted protein 2121 70.22 0 2346437..2347084 - 215 121594557 - Ajs_2212 - hypothetical protein 2122 69.28 0 2347081..2347692 - 203 121594558 - Ajs_2213 - hypothetical protein 2123 56.09 -2 2348050..2348361 + 103 121594559 - Ajs_2214 - hypothetical protein 2124 58.88 -1 2348354..2349265 + 303 121594560 - Ajs_2215 - hypothetical protein 2125 60.98 -1 2349262..2349507 + 81 121594561 - Ajs_2216 - hypothetical protein 2126 58.39 -1 2349504..2351267 + 587 121594562 - Ajs_2217 - hypothetical protein 66.47 MEAN 4.71 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0