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Acidovorax sp. JS42, complete genome - 1..4448856 4007 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1894 67.86 0 2069349..2069768 - 139 121594330 - Ajs_1970 - hypothetical protein 1895 61.76 0 2069835..2070425 - 196 121594331 - Ajs_1971 - hypothetical protein 1896 63.43 0 2073679..2075007 - 442 121594332 - Ajs_1976 - transposase IS116/IS110/IS902 family protein 1897 64.35 0 2075379..2077232 - 617 121594333 - Ajs_1977 - phage integrase family protein 1898 66.60 0 2077713..2079203 - 496 121594334 - Ajs_1978 - succinate semialdehyde dehydrogenase 1899 66.48 0 2079348..2081972 + 874 121594335 - Ajs_1979 - alanyl-tRNA synthetase 1900 64.68 0 2082120..2083124 - 334 121594336 - Ajs_1980 - diguanylate cyclase 1901 68.65 0 2083145..2083900 - 251 121594337 - Ajs_1981 - tRNA (guanine-N(7)-)-methyltransferase 1902 68.11 0 2083897..2084868 - 323 121594338 - Ajs_1982 - glutamate--tRNA ligase 1903 71.83 +1 2084865..2085968 - 367 121594339 - Ajs_1983 - FAD dependent oxidoreductase 1904 69.76 0 2086065..2087003 - 312 121594340 - Ajs_1984 - LysR family transcriptional regulator 1905 65.53 0 2087121..2087822 + 233 121594341 - Ajs_1985 - pirin domain-containing protein 1906 65.22 0 2087859..2088272 + 137 121594342 - Ajs_1986 - DoxX family protein 1907 65.05 0 2088344..2089084 - 246 121594343 - Ajs_1987 - arginyl-tRNA-protein transferase 1908 67.06 0 2089081..2089845 - 254 121594344 aat Ajs_1988 - leucyl/phenylalanyl-tRNA--protein transferase 1909 68.29 0 2089884..2090315 - 143 121594345 - Ajs_1989 - glyoxalase/bleomycin resistance protein/dioxygenase 1910 68.01 0 2090402..2091739 - 445 121594346 - Ajs_1990 - glucarate dehydratase 1911 71.63 +1 2091783..2092769 - 328 121594347 - Ajs_1991 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 1912 65.83 0 2092837..2093790 - 317 121594348 - Ajs_1992 - hypothetical protein 1913 63.82 0 2093860..2094771 - 303 121594349 - Ajs_1993 - 5-dehydro-4-deoxyglucarate dehydratase 1914 66.25 0 2094864..2095832 - 322 121594350 - Ajs_1994 - hypothetical protein 1915 65.68 0 2095943..2096749 - 268 121594351 - Ajs_1995 - GntR family transcriptional regulator 1916 67.13 0 2096846..2098153 + 435 121594352 - Ajs_1996 - mandelate racemase/muconate lactonizing protein 1917 67.36 0 2098185..2099189 + 334 121594353 - Ajs_1997 - hypothetical protein 1918 67.69 0 2099332..2100894 + 520 121594354 - Ajs_1998 - galactarate dehydratase 1919 66.76 0 2100944..2102002 + 352 121594355 - Ajs_1999 - gluconolactonase 1920 66.96 0 2102288..2102626 - 112 121594356 - Ajs_2000 - hypothetical protein 1921 67.26 0 2102694..2103875 - 393 121594357 - Ajs_2001 - tryptophan synthase subunit beta 1922 67.96 0 2104126..2104512 + 128 121594358 - Ajs_2002 - hypothetical protein 1923 41.83 -2 2104939..2106291 - 450 121594359 - Ajs_2003 - hypothetical protein 1924 57.70 -1 2106468..2107448 - 326 121594360 - Ajs_2004 - transposase, IS4 family protein 1925 66.44 0 2108119..2109006 - 295 121594361 - Ajs_2005 - 3-hydroxyisobutyrate dehydrogenase 1926 71.60 +1 2109099..2109503 - 134 121594362 - Ajs_2006 - hypothetical protein 1927 68.04 0 2109573..2110739 - 388 121594363 - Ajs_2007 - acyl-CoA dehydrogenase domain-containing protein 1928 72.03 +1 2110767..2111195 - 142 121594364 - Ajs_2008 - hypothetical protein 1929 66.80 0 2111234..2112757 - 507 121594365 - Ajs_2009 - methylmalonate-semialdehyde dehydrogenase [acylating] 1930 68.86 0 2112914..2113825 + 303 121594366 - Ajs_2010 - LysR family transcriptional regulator 1931 61.83 0 2113895..2114287 - 130 121594367 - Ajs_2011 - hypothetical protein 1932 67.51 0 2114302..2114775 + 157 121594368 - Ajs_2012 - CBS domain-containing protein 1933 62.26 0 2114832..2114990 - 52 121594369 - Ajs_2013 - hypothetical protein 1934 69.44 0 2115344..2116534 + 396 121594370 - Ajs_2014 - glucose sorbosone dehydrogenase 1935 68.13 0 2116689..2117303 + 204 121594371 - Ajs_2015 - isochorismatase hydrolase 1936 68.62 0 2117524..2119419 + 631 121594372 - Ajs_2016 - propionyl-CoA synthetase 1937 70.62 0 2119508..2123407 - 1299 121594373 - Ajs_2017 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 1938 72.10 +1 2123626..2124564 - 312 121594374 - Ajs_2018 - hypothetical protein 1939 72.50 +1 2124561..2125109 - 182 121594375 - Ajs_2019 - methylated-DNA--protein-cysteine methyltransferase 1940 72.46 +1 2125170..2126723 - 517 121594376 - Ajs_2020 - DNA-O6-methylguanine--protein-cysteine S-methyltransferase / DNA-3-methyladenine glycosylase II / transcriptional regulator Ada 1941 68.39 0 2126920..2128308 + 462 121594377 - Ajs_2021 - phosphomannomutase 1942 72.32 +1 2128329..2129690 + 453 121594378 - Ajs_2022 - 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein 1943 69.31 0 2129795..2132521 + 908 121594379 - Ajs_2023 - GCN5-related N-acetyltransferase 1944 66.67 0 2132528..2132881 + 117 121594380 - Ajs_2024 - hypothetical protein 1945 68.38 0 2132926..2133507 + 193 121594381 - Ajs_2025 - deaminase-reductase domain-containing protein 1946 71.26 +1 2133591..2134808 - 405 121594382 - Ajs_2026 - TolC family type I secretion outer membrane protein 1947 70.80 0 2134994..2135332 - 112 121594383 - Ajs_2027 - rhodanese domain-containing protein 1948 68.92 0 2135364..2136074 - 236 121594384 - Ajs_2028 - methyltransferase type 11 1949 65.61 0 2136122..2136784 - 220 121594385 - Ajs_2029 - TetR family transcriptional regulator 1950 66.12 0 2136915..2137460 + 181 121594386 - Ajs_2030 - peptide methionine sulfoxide reductase 1951 66.67 0 2137613..2137852 + 79 121594387 - Ajs_2031 - hypothetical protein 1952 75.80 +1 2137878..2138282 + 134 121594388 - Ajs_2032 - hypothetical protein 1953 71.22 +1 2138459..2140546 + 695 121594389 - Ajs_2033 - TonB-dependent receptor 1954 72.05 +1 2140960..2141832 + 290 121594390 - Ajs_2034 - hypothetical protein 1955 74.35 +1 2141969..2143192 + 407 121594391 - Ajs_2035 - chromate transporter 1956 71.52 +1 2143257..2143709 - 150 121594392 - Ajs_2036 - AsnC family transcriptional regulator 1957 70.09 0 2143847..2145016 + 389 121594393 - Ajs_2037 - saccharopine dehydrogenase 1958 69.51 0 2145017..2146846 - 609 121594394 - Ajs_2038 - AMP-dependent synthetase and ligase 1959 66.98 0 2147015..2147650 - 211 121594395 - Ajs_2039 - GntR family transcriptional regulator 1960 64.68 0 2147775..2149937 + 720 121594396 - Ajs_2040 - methylmalonyl-CoA mutase 1961 68.12 0 2149997..2150962 + 321 121594397 - Ajs_2041 - arginine/ornithine transport system ATPase 1962 63.80 0 2150988..2152520 + 510 121594398 - Ajs_2042 - carboxyl transferase 1963 64.96 0 2152542..2154590 + 682 121594399 - Ajs_2043 - carbamoyl-phosphate synthase L chain, ATP-binding 1964 63.42 0 2154650..2155111 + 153 121594400 - Ajs_2044 - lactoylglutathione lyase 1965 63.25 0 2155477..2156529 + 350 121594401 - Ajs_2045 - biotin synthase 1966 64.14 0 2156795..2157586 + 263 121594402 - Ajs_2046 - short-chain dehydrogenase/reductase SDR 1967 62.59 0 2157649..2158065 + 138 121594403 - Ajs_2047 - lactoylglutathione lyase 1968 70.22 0 2158135..2158782 - 215 121594404 - Ajs_2048 - 2-keto-3-deoxy-phosphogluconate aldolase 1969 69.58 0 2158773..2160590 - 605 121594405 - Ajs_2049 - phosphogluconate dehydratase 1970 64.19 0 2160751..2161761 - 336 121594406 - Ajs_2050 - TRAP dicarboxylate transporter, DctP subunit 1971 66.20 0 2161806..2163086 - 426 121594407 - Ajs_2051 - TRAP dicarboxylate transporter, DctM subunit 1972 67.43 0 2163095..2163616 - 173 121594408 - Ajs_2052 - tripartite ATP-independent periplasmic transporter DctQ 1973 67.94 0 2163613..2164161 - 182 121594409 - Ajs_2053 - carbohydrate kinase 1974 71.25 +1 2164377..2165402 + 341 121594410 - Ajs_2054 - LacI family transcription regulator 1975 69.63 0 2165586..2166125 - 179 121594411 - Ajs_2055 - OmpA/MotB domain-containing protein 1976 70.20 0 2166188..2166781 + 197 121594412 - Ajs_2056 - ChaC family protein 1977 71.59 +1 2166815..2167342 + 175 121594413 - Ajs_2057 - superoxide dismutase, copper/zinc binding 1978 69.42 0 2167381..2168034 + 217 121594414 - Ajs_2058 - pyridoxamine 5'-phosphate oxidase 1979 69.58 0 2168079..2169107 - 342 121594415 - Ajs_2059 - auxin efflux carrier 1980 68.94 0 2169267..2170322 + 351 121594416 - Ajs_2060 - tRNA-dihydrouridine synthase A 1981 69.22 0 2170312..2173014 - 900 121594417 - Ajs_2061 - diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) 1982 64.71 0 2173184..2174254 + 356 121594418 - Ajs_2062 - RelA/SpoT domain-containing protein 1983 65.52 0 2174424..2175731 + 435 121594419 - Ajs_2063 - polyhydroxyalkanoate depolymerase, intracellular 1984 73.55 +1 2175740..2176393 + 217 121594420 - Ajs_2064 - electron transport complex, RnfABCDGE type, B subunit 1985 69.01 0 2176476..2178140 - 554 121594421 - Ajs_2065 - methyl-accepting chemotaxis sensory transducer 1986 66.83 0 2178160..2179374 + 404 121594422 - Ajs_2066 - hypothetical protein 1987 66.55 0 2179371..2180195 + 274 121594423 dapD Ajs_2067 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 1988 65.46 0 2180252..2181415 + 387 121594424 - Ajs_2068 - twitching motility protein 1989 67.77 0 2181459..2182634 + 391 121594425 - Ajs_2069 - succinyl-diaminopimelate desuccinylase 1990 70.11 0 2182631..2183560 + 309 121594426 - Ajs_2070 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1991 66.77 0 2183607..2185577 + 656 121594427 - Ajs_2071 - ABC transporter related 1992 63.28 0 2186026..2186763 - 245 121594428 fabG Ajs_2072 - 3-ketoacyl-(acyl-carrier-protein) reductase 1993 68.53 0 2187009..2188187 - 392 121594429 - Ajs_2073 - acetyl-CoA acetyltransferase 66.47 MEAN 4.71 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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