version 1.0
Acidovorax sp. JS42, complete genome - 1..4448856 4007 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1803 60.57 -1 1961442..1962671 + 409 121594239 - Ajs_1877 - transposase Tn3 1804 65.34 0 1962744..1965386 - 880 121594240 - Ajs_1878 - heavy metal translocating P-type ATPase 1805 63.87 0 1965565..1966851 + 428 121594241 - Ajs_1879 - sodium/calcium exchanger membrane region 1806 60.49 -1 1967219..1967623 - 134 121594242 - Ajs_1880 - hypothetical protein 1807 69.02 0 1968234..1969934 + 566 121594243 - Ajs_1882 - phage integrase family protein 1808 63.64 0 1969947..1970276 - 109 121594244 - Ajs_1883 - XRE family transcriptional regulator 1809 60.94 -1 1970273..1970656 - 127 121594245 - Ajs_1884 - hypothetical protein 1810 58.61 -1 1971445..1972698 - 417 121594246 - Ajs_1886 - phage integrase family protein 1811 63.10 0 1972732..1973739 + 335 121594247 - Ajs_1887 - hypothetical protein 1812 68.24 0 1973823..1974203 - 126 121594248 - Ajs_1888 - hypothetical protein 1813 69.57 0 1974225..1975256 - 343 121594249 - Ajs_1889 - alcohol dehydrogenase 1814 65.03 0 1975352..1976875 - 507 121594250 - Ajs_1890 - aldehyde dehydrogenase 1815 71.85 +1 1977165..1978880 - 571 121594251 - Ajs_1891 - Na+/Pi-cotransporter 1816 71.52 +1 1979182..1981656 + 824 121594252 - Ajs_1892 - putative GAF sensor protein 1817 65.56 0 1981740..1982369 - 209 121594253 - Ajs_1893 - uracil phosphoribosyltransferase 1818 67.59 0 1982407..1983381 - 324 121594254 - Ajs_1894 - pyridoxal-5'-phosphate-dependent enzyme, beta subunit 1819 66.11 0 1983579..1984838 - 419 121594255 - Ajs_1895 - nitric oxide dioxygenase 1820 70.30 0 1984965..1986560 + 531 121594256 - Ajs_1896 - anaerobic nitric oxide reductase transcription regulator 1821 66.20 0 1986789..1988300 - 503 121594257 - Ajs_1897 - protein of unknown function DUF853, NPT hydrolase putative 1822 65.14 0 1988382..1989101 + 239 121594258 - Ajs_1898 - hypothetical protein 1823 67.06 0 1989123..1990409 + 428 121594259 - Ajs_1899 - phosphoribosylamine--glycine ligase 1824 68.46 0 1990406..1991410 + 334 121594260 - Ajs_1900 - coproporphyrinogen III oxidase 1825 66.30 0 1991581..1992405 + 274 121594261 - Ajs_1901 - iojap-like protein 1826 68.38 0 1992421..1992888 + 155 121594262 - Ajs_1902 - hypothetical protein 1827 70.02 0 1992940..1993566 + 208 121594263 - Ajs_1903 - maf protein 1828 66.01 0 1993594..1994358 - 254 121594264 - Ajs_1904 - CRP/FNR family transcriptional regulator 1829 67.89 0 1994412..1996040 - 542 121594265 - Ajs_1905 - cytochrome d1, heme region 1830 66.26 0 1996105..1997325 - 406 121594266 - Ajs_1906 - radical SAM domain-containing protein 1831 70.60 0 1997328..1997810 - 160 121594267 - Ajs_1907 - AsnC family transcriptional regulator 1832 66.87 0 1997800..1998282 - 160 121594268 - Ajs_1908 - AsnC family transcriptional regulator 1833 71.73 +1 1998269..1999315 - 348 121594269 - Ajs_1909 - AsnC family transcriptional regulator 1834 68.56 0 1999319..2000533 - 404 121594270 - Ajs_1910 - cytochrome d1, heme region 1835 70.72 0 2000530..2000874 - 114 121594271 - Ajs_1911 - hypothetical protein 1836 62.03 0 2000894..2002618 - 574 121594272 - Ajs_1912 - nitrite reductase (NO-forming) 1837 69.96 0 2002805..2003653 + 282 121594273 - Ajs_1913 - uroporphyrin-III C-methyltransferase 1838 66.13 0 2003730..2005217 + 495 121594274 - Ajs_1914 - ribonuclease G 1839 66.06 0 2005623..2006774 - 383 121594275 - Ajs_1915 - putative aminotransferase 1840 63.27 0 2006981..2008069 + 362 121594276 - Ajs_1916 - transposase, IS4 family protein 1841 66.24 0 2008240..2009181 - 313 121594277 - Ajs_1917 - transcriptional regulator CysB-like protein 1842 68.23 0 2009256..2009639 - 127 121594278 - Ajs_1918 - cobalamin (vitamin B12) biosynthesis CbiX protein 1843 64.86 0 2009658..2010767 - 369 121594279 - Ajs_1919 - permease YjgP/YjgQ family protein 1844 65.11 0 2010764..2011855 - 363 121594280 - Ajs_1920 - permease YjgP/YjgQ family protein 1845 66.06 0 2011879..2013369 + 496 121594281 - Ajs_1921 - PepA aminopeptidase 1846 61.90 0 2013395..2013835 + 146 121594282 - Ajs_1922 - DNA polymerase III chi subunit, HolC 1847 66.20 0 2013832..2014263 + 143 121594283 - Ajs_1923 - hypothetical protein 1848 61.39 -1 2014342..2015421 - 359 121594284 - Ajs_1924 - integrase catalytic subunit 1849 61.99 0 2015585..2016718 + 377 121594285 - Ajs_1925 - extracellular ligand-binding receptor 1850 63.10 0 2016796..2017803 - 335 121594286 - Ajs_1926 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 1851 64.87 0 2018021..2018578 + 185 121594287 - Ajs_1927 - hypothetical protein 1852 65.07 0 2018714..2019466 + 250 121594288 - Ajs_1928 - hypothetical protein 1853 66.67 0 2019561..2020001 + 146 121594289 - Ajs_1929 - UspA domain-containing protein 1854 64.75 0 2020097..2021089 - 330 121594290 - Ajs_1930 - hypothetical protein 1855 67.51 0 2021239..2022423 - 394 121594291 - Ajs_1931 - beta-ketothiolase 1856 70.50 0 2022533..2023315 - 260 121594292 - Ajs_1932 - short-chain dehydrogenase/reductase SDR 1857 72.80 +1 2023347..2024015 - 222 121594293 - Ajs_1933 - ribosomal large subunit pseudouridine synthase A 1858 69.35 0 2024071..2026233 - 720 121594294 - Ajs_1934 - signal transduction histidine kinase, nitrogen specific, NtrB 1859 68.41 0 2026309..2026710 - 133 121594295 - Ajs_1935 - peptidylprolyl isomerase, FKBP-type 1860 67.32 0 2026781..2029675 - 964 121594296 - Ajs_1936 - glycine dehydrogenase 1861 66.40 0 2029744..2030118 - 124 121594297 - Ajs_1937 - glycine cleavage system H protein 1862 68.61 0 2030222..2031352 - 376 121594298 - Ajs_1938 - glycine cleavage system T protein 1863 64.40 0 2031630..2032907 - 425 121594299 - Ajs_1939 - TRAP dicarboxylate transporter, DctM subunit 1864 65.45 0 2032990..2033484 - 164 121594300 - Ajs_1940 - tripartite ATP-independent periplasmic transporter DctQ 1865 63.68 0 2033562..2034533 - 323 121594301 - Ajs_1941 - TRAP dicarboxylate transporter, DctP subunit 1866 62.39 0 2034818..2035285 + 155 121594302 - Ajs_1942 - AsnC family transcriptional regulator 1867 65.78 0 2035308..2036432 - 374 121594303 - Ajs_1943 - TonB-dependent receptor 1868 64.55 0 2036753..2037979 + 408 121594304 - Ajs_1944 - transposase IS116/IS110/IS902 family protein 1869 67.77 0 2038022..2038924 - 300 121594305 - Ajs_1945 - TonB-dependent receptor, plug 1870 69.43 0 2039038..2040051 + 337 121594306 - Ajs_1946 - AraC family transcriptional regulator 1871 69.06 0 2040142..2040936 - 264 121594307 - Ajs_1947 - ABC transporter related 1872 66.33 0 2040953..2041840 - 295 121594308 - Ajs_1948 - inner-membrane translocator 1873 65.12 0 2041946..2042914 - 322 121594309 - Ajs_1949 - hypothetical protein 1874 64.38 0 2043133..2044839 - 568 121594310 - Ajs_1950 - electron-transferring-flavoprotein dehydrogenase 1875 65.16 0 2045403..2046929 + 508 121594311 - Ajs_1951 - methyl-accepting chemotaxis sensory transducer 1876 69.47 0 2046999..2048354 - 451 121594312 - Ajs_1952 - integral membrane sensor signal transduction histidine kinase 1877 69.75 0 2048351..2049031 - 226 121594313 - Ajs_1953 - two component transcriptional regulator 1878 67.52 0 2049173..2049874 + 233 121594314 - Ajs_1954 - PAP2 (acid phosphatase) superfamily protein-like protein 1879 68.19 0 2049921..2051690 + 589 121594315 - Ajs_1955 - sulfatase 1880 64.95 0 2051754..2052335 - 193 121594316 - Ajs_1956 - uncharacterized peroxidase-related enzyme 1881 71.64 +1 2052352..2053035 - 227 121594317 - Ajs_1957 - DTW domain-containing protein 1882 66.53 0 2053142..2054593 - 483 121594318 - Ajs_1958 - catalase 1883 70.57 0 2054769..2056049 + 426 121594319 - Ajs_1959 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 1884 66.30 0 2056169..2056714 - 181 121594320 - Ajs_1960 - LuxR family transcriptional regulator 1885 65.54 0 2056797..2057504 + 235 121594321 - Ajs_1961 - 3-oxoacid CoA-transferase, A subunit 1886 64.16 0 2057508..2058146 + 212 121594322 - Ajs_1962 - butyryl-CoA:acetate CoA transferase 1887 67.28 0 2058298..2059611 + 437 121594323 - Ajs_1963 - metal dependent phosphohydrolase 1888 61.48 -1 2059746..2060747 + 333 121594324 - Ajs_1964 - hypothetical protein 1889 74.09 +1 2060823..2061590 + 255 121594325 - Ajs_1965 - hypothetical protein 1890 75.74 +1 2061556..2062965 + 469 121594326 - Ajs_1966 - hypothetical protein 1891 71.17 0 2062962..2066156 + 1064 121594327 - Ajs_1967 - DNA polymerase III, alpha subunit 1892 75.60 +1 2066220..2067473 - 417 121594328 - Ajs_1968 - Sel1 domain-containing protein 1893 67.30 0 2067509..2069254 - 581 121594329 - Ajs_1969 - hypothetical protein 1894 67.86 0 2069349..2069768 - 139 121594330 - Ajs_1970 - hypothetical protein 1895 61.76 0 2069835..2070425 - 196 121594331 - Ajs_1971 - hypothetical protein 1896 63.43 0 2073679..2075007 - 442 121594332 - Ajs_1976 - transposase IS116/IS110/IS902 family protein 1897 64.35 0 2075379..2077232 - 617 121594333 - Ajs_1977 - phage integrase family protein 1898 66.60 0 2077713..2079203 - 496 121594334 - Ajs_1978 - succinate semialdehyde dehydrogenase 1899 66.48 0 2079348..2081972 + 874 121594335 - Ajs_1979 - alanyl-tRNA synthetase 1900 64.68 0 2082120..2083124 - 334 121594336 - Ajs_1980 - diguanylate cyclase 1901 68.65 0 2083145..2083900 - 251 121594337 - Ajs_1981 - tRNA (guanine-N(7)-)-methyltransferase 1902 68.11 0 2083897..2084868 - 323 121594338 - Ajs_1982 - glutamate--tRNA ligase 66.47 MEAN 4.71 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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