version 1.0
Acidovorax sp. JS42, complete genome - 1..4448856 4007 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1741 66.40 0 1879578..1881452 + 624 121594177 - Ajs_1810 - extracellular solute-binding protein 1742 63.58 0 1881460..1882497 + 345 121594178 - Ajs_1811 - binding-protein-dependent transport systems inner membrane component 1743 65.30 0 1882501..1883598 + 365 121594179 - Ajs_1812 - binding-protein-dependent transport systems inner membrane component 1744 70.45 0 1883620..1885257 + 545 121594180 - Ajs_1813 - ABC transporter related 1745 69.58 0 1885585..1886751 + 388 121594181 - Ajs_1814 - putative lipoprotein 1746 70.65 0 1886829..1887656 + 275 121594182 - Ajs_1815 - hydroxypyruvate isomerase 1747 72.66 +1 1888042..1888908 - 288 121594183 - Ajs_1816 - UspA domain-containing protein 1748 70.95 0 1889057..1889989 - 310 121594184 - Ajs_1817 - LysR family transcriptional regulator 1749 73.10 +1 1890086..1891438 + 450 121594185 - Ajs_1818 - hypothetical protein 1750 67.22 0 1891448..1891810 + 120 121594186 - Ajs_1819 - hypothetical protein 1751 68.19 0 1891855..1892841 + 328 121594187 - Ajs_1820 - hypothetical protein 1752 67.63 0 1892910..1894055 - 381 121594188 - Ajs_1821 - hypothetical protein 1753 64.03 0 1894185..1897061 + 958 121594189 kgd Ajs_1822 - alpha-ketoglutarate decarboxylase 1754 66.67 0 1897111..1898376 + 421 121594190 - Ajs_1823 - 2-oxoglutarate dehydrogenase E2 component 1755 64.50 0 1898466..1899893 + 475 121594191 - Ajs_1824 - dihydrolipoamide dehydrogenase 1756 63.95 0 1899971..1901074 + 367 121594192 - Ajs_1825 - AFG1 family ATPase 1757 71.03 0 1901074..1901760 + 228 121594193 - Ajs_1826 - hypothetical protein 1758 65.05 0 1901820..1902623 - 267 121594194 - Ajs_1827 - protein phosphatase 2C domain-containing protein 1759 68.51 0 1902794..1904860 + 688 121594195 - Ajs_1828 - helicase c2 1760 63.46 0 1904823..1905725 - 300 121594196 - Ajs_1829 - putative transmembrane protein 1761 63.83 0 1905731..1909294 + 1187 121594197 - Ajs_1830 - DNA polymerase III, alpha subunit 1762 62.50 0 1909333..1909740 + 135 121594198 - Ajs_1831 - ATP-dependent Clp protease adaptor protein ClpS 1763 63.94 0 1909800..1912148 + 782 121594199 - Ajs_1832 - ATP-dependent Clp protease, ATP-binding subunit clpA 1764 67.82 0 1912399..1913007 + 202 121594200 - Ajs_1833 - TetR family transcriptional regulator 1765 70.75 0 1913004..1914155 + 383 121594201 - Ajs_1834 - RND family efflux transporter MFP subunit 1766 65.75 0 1914152..1915351 + 399 121594202 - Ajs_1835 - hypothetical protein 1767 68.07 0 1915362..1916072 + 236 121594203 - Ajs_1836 - ABC transporter related 1768 73.82 +1 1916165..1917589 - 474 121594204 - Ajs_1837 - lytic murein transglycosylase 1769 68.82 0 1917634..1919073 + 479 121594205 sbcB Ajs_1838 - exonuclease I 1770 70.85 0 1919082..1919966 + 294 121594206 - Ajs_1839 - silent information regulator protein Sir2 1771 72.50 +1 1920037..1922040 + 667 121594207 - Ajs_1840 - Fis family GAF modulated sigma54 specific transcriptional regulator 1772 57.76 -1 1922296..1922643 - 115 121594208 - Ajs_1841 - hypothetical protein 1773 58.28 -1 1922640..1925678 - 1012 121594209 - Ajs_1842 - transposase Tn3 family protein 1774 61.94 0 1926335..1927159 - 274 121594210 - Ajs_1844 - integrase catalytic subunit 1775 60.22 -1 1927207..1927485 - 92 121594211 - Ajs_1845 - transposase IS3/IS911 family protein 1776 59.17 -1 1927593..1927952 + 119 121594212 - Ajs_1846 - hypothetical protein 1777 61.43 -1 1928110..1929465 + 451 121594213 - Ajs_1847 - outer membrane efflux protein 1778 57.51 -1 1929468..1931084 + 538 121594214 - Ajs_1848 - RND family efflux transporter MFP subunit 1779 59.30 -1 1931100..1934288 + 1062 121594215 - Ajs_1849 - CzcA family heavy metal efflux protein 1780 60.37 -1 1934352..1934732 + 126 121594216 - Ajs_1850 - hypothetical protein 1781 57.67 -1 1935233..1935721 - 162 121594217 - Ajs_1851 - MerR family transcriptional regulator 1782 65.01 0 1936716..1939004 + 762 121594218 - Ajs_1853 - transposase Tn3 family protein 1783 69.51 0 1939130..1939867 - 245 121594219 - Ajs_1854 - IstB ATP binding domain-containing protein 1784 68.50 0 1939904..1941427 - 507 121594220 - Ajs_1855 - integrase catalytic subunit 1785 59.12 -1 1942832..1943149 - 105 121594221 - Ajs_1857 - hypothetical protein 1786 63.96 0 1943299..1944963 - 554 121594222 - Ajs_1858 - phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase 1787 64.35 0 1945078..1945509 - 143 121594223 - Ajs_1859 - phage transcriptional regulator, AlpA 1788 64.44 0 1945732..1946943 + 403 121594224 - Ajs_1860 - hypothetical protein 1789 64.39 0 1946960..1947619 + 219 121594225 - Ajs_1861 - hypothetical protein 1790 66.97 0 1947628..1948608 + 326 121594226 - Ajs_1862 - hypothetical protein 1791 60.41 -1 1948687..1949772 + 361 121594227 - Ajs_1863 - putative transposase 1792 64.46 0 1949775..1950590 + 271 121594228 - Ajs_1864 - hypothetical protein 1793 61.77 0 1950627..1951790 + 387 121594229 - Ajs_1865 - patatin 1794 60.58 -1 1951883..1952227 + 114 121594230 - Ajs_1866 - putative sigma E regulatory protein, MucB/RseB 1795 67.97 0 1952208..1953434 - 408 121594231 - Ajs_1867 - transposase, IS204/IS1001/IS1096/IS1165 family protein 1796 56.17 -2 1955051..1955650 - 199 121594232 - Ajs_1869 - membrane protein-like protein 1797 63.27 0 1955963..1957051 - 362 121594233 - Ajs_1871 - transposase, IS4 family protein 1798 66.67 0 1957134..1957610 - 158 121594234 - Ajs_1872 - hypothetical protein 1799 63.84 0 1957630..1958301 - 223 121594235 - Ajs_1873 - PAP2 (acid phosphatase) superfamily protein-like protein 1800 61.39 -1 1958491..1959570 + 359 121594236 - Ajs_1874 - integrase catalytic subunit 1801 59.88 -1 1959656..1960156 + 166 121594237 - Ajs_1875 - hypothetical protein 1802 61.21 -1 1960193..1961035 + 280 121594238 - Ajs_1876 - hypothetical protein 1803 60.57 -1 1961442..1962671 + 409 121594239 - Ajs_1877 - transposase Tn3 1804 65.34 0 1962744..1965386 - 880 121594240 - Ajs_1878 - heavy metal translocating P-type ATPase 1805 63.87 0 1965565..1966851 + 428 121594241 - Ajs_1879 - sodium/calcium exchanger membrane region 1806 60.49 -1 1967219..1967623 - 134 121594242 - Ajs_1880 - hypothetical protein 1807 69.02 0 1968234..1969934 + 566 121594243 - Ajs_1882 - phage integrase family protein 1808 63.64 0 1969947..1970276 - 109 121594244 - Ajs_1883 - XRE family transcriptional regulator 1809 60.94 -1 1970273..1970656 - 127 121594245 - Ajs_1884 - hypothetical protein 1810 58.61 -1 1971445..1972698 - 417 121594246 - Ajs_1886 - phage integrase family protein 1811 63.10 0 1972732..1973739 + 335 121594247 - Ajs_1887 - hypothetical protein 1812 68.24 0 1973823..1974203 - 126 121594248 - Ajs_1888 - hypothetical protein 1813 69.57 0 1974225..1975256 - 343 121594249 - Ajs_1889 - alcohol dehydrogenase 1814 65.03 0 1975352..1976875 - 507 121594250 - Ajs_1890 - aldehyde dehydrogenase 1815 71.85 +1 1977165..1978880 - 571 121594251 - Ajs_1891 - Na+/Pi-cotransporter 1816 71.52 +1 1979182..1981656 + 824 121594252 - Ajs_1892 - putative GAF sensor protein 1817 65.56 0 1981740..1982369 - 209 121594253 - Ajs_1893 - uracil phosphoribosyltransferase 1818 67.59 0 1982407..1983381 - 324 121594254 - Ajs_1894 - pyridoxal-5'-phosphate-dependent enzyme, beta subunit 1819 66.11 0 1983579..1984838 - 419 121594255 - Ajs_1895 - nitric oxide dioxygenase 1820 70.30 0 1984965..1986560 + 531 121594256 - Ajs_1896 - anaerobic nitric oxide reductase transcription regulator 1821 66.20 0 1986789..1988300 - 503 121594257 - Ajs_1897 - protein of unknown function DUF853, NPT hydrolase putative 1822 65.14 0 1988382..1989101 + 239 121594258 - Ajs_1898 - hypothetical protein 1823 67.06 0 1989123..1990409 + 428 121594259 - Ajs_1899 - phosphoribosylamine--glycine ligase 1824 68.46 0 1990406..1991410 + 334 121594260 - Ajs_1900 - coproporphyrinogen III oxidase 1825 66.30 0 1991581..1992405 + 274 121594261 - Ajs_1901 - iojap-like protein 1826 68.38 0 1992421..1992888 + 155 121594262 - Ajs_1902 - hypothetical protein 1827 70.02 0 1992940..1993566 + 208 121594263 - Ajs_1903 - maf protein 1828 66.01 0 1993594..1994358 - 254 121594264 - Ajs_1904 - CRP/FNR family transcriptional regulator 1829 67.89 0 1994412..1996040 - 542 121594265 - Ajs_1905 - cytochrome d1, heme region 1830 66.26 0 1996105..1997325 - 406 121594266 - Ajs_1906 - radical SAM domain-containing protein 1831 70.60 0 1997328..1997810 - 160 121594267 - Ajs_1907 - AsnC family transcriptional regulator 1832 66.87 0 1997800..1998282 - 160 121594268 - Ajs_1908 - AsnC family transcriptional regulator 1833 71.73 +1 1998269..1999315 - 348 121594269 - Ajs_1909 - AsnC family transcriptional regulator 1834 68.56 0 1999319..2000533 - 404 121594270 - Ajs_1910 - cytochrome d1, heme region 1835 70.72 0 2000530..2000874 - 114 121594271 - Ajs_1911 - hypothetical protein 1836 62.03 0 2000894..2002618 - 574 121594272 - Ajs_1912 - nitrite reductase (NO-forming) 1837 69.96 0 2002805..2003653 + 282 121594273 - Ajs_1913 - uroporphyrin-III C-methyltransferase 1838 66.13 0 2003730..2005217 + 495 121594274 - Ajs_1914 - ribonuclease G 1839 66.06 0 2005623..2006774 - 383 121594275 - Ajs_1915 - putative aminotransferase 1840 63.27 0 2006981..2008069 + 362 121594276 - Ajs_1916 - transposase, IS4 family protein 66.47 MEAN 4.71 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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