version 1.0
Acidovorax sp. JS42, complete genome - 1..4448856 4007 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1703 63.23 0 1836199..1837215 + 338 121594139 - Ajs_1771 - ketol-acid reductoisomerase 1704 64.15 0 1837391..1838224 + 277 121594140 - Ajs_1772 - CDP-diacylglycerol--serine O-phosphatidyltransferase 1705 62.25 0 1838447..1840120 + 557 121594141 - Ajs_1773 - 2-isopropylmalate synthase 1706 63.35 0 1840156..1841694 + 512 121594142 - Ajs_1774 - 2-isopropylmalate synthase 1707 65.00 0 1841809..1842891 + 360 121594143 - Ajs_1775 - murein-DD-endopeptidase 1708 64.70 0 1842963..1843775 - 270 121594144 - Ajs_1776 - IclR family transcriptional regulator 1709 65.33 0 1844011..1845285 - 424 121594145 - Ajs_1777 - acyl-CoA dehydrogenase domain-containing protein 1710 67.13 0 1845317..1846402 - 361 121594146 - Ajs_1778 - aminoglycoside phosphotransferase 1711 64.72 0 1846527..1847246 - 239 121594147 - Ajs_1779 - Crp/FNR family transcriptional regulator 1712 69.53 0 1847449..1848216 - 255 121594148 - Ajs_1780 - enoyl-CoA hydratase/isomerase 1713 69.63 0 1848239..1849759 - 506 121594149 - Ajs_1781 - 3-hydroxybutyryl-CoA dehydrogenase 1714 70.34 0 1849836..1851902 + 688 121594150 - Ajs_1782 - hypothetical protein 1715 70.65 0 1851933..1852862 - 309 121594151 - Ajs_1783 - thiamine-phosphate pyrophosphorylase 1716 69.62 0 1852865..1853677 - 270 121594152 thiG Ajs_1784 - thiazole synthase 1717 66.16 0 1853689..1853886 - 65 121594153 - Ajs_1785 - thiamine biosynthesis protein ThiS 1718 70.49 0 1853883..1855007 - 374 121594154 - Ajs_1786 - FAD dependent oxidoreductase 1719 69.90 0 1855225..1856151 + 308 121594155 - Ajs_1787 - phosphomethylpyrimidine kinase 1720 72.12 +1 1856219..1856695 - 158 121594156 - Ajs_1788 - SH3 type 3 domain-containing protein 1721 72.21 +1 1856955..1858019 - 354 121594157 - Ajs_1789 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 1722 60.49 -1 1858045..1858368 - 107 121594158 - Ajs_1790 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1723 70.55 0 1858471..1859859 - 462 121594159 - Ajs_1791 - sulfate adenylyltransferase subunit 1 1724 67.42 0 1859859..1860791 - 310 121594160 - Ajs_1792 - sulfate adenylyltransferase subunit 2 1725 68.85 0 1860853..1861494 - 213 121594161 - Ajs_1793 - phosphoadenylylsulfate reductase (thioredoxin) 1726 69.95 0 1861491..1861886 - 131 121594162 - Ajs_1794 - hypothetical protein 1727 68.57 0 1861912..1863699 - 595 121594163 - Ajs_1795 - nitrite/sulfite reductase hemoprotein beta subunit 1728 72.60 +1 1863853..1865772 - 639 121594164 - Ajs_1796 - hypothetical protein 1729 63.96 0 1865808..1866473 - 221 121594165 - Ajs_1797 - hypothetical protein 1730 62.64 0 1866882..1867154 - 90 121594166 - Ajs_1798 - hypothetical protein 1731 62.09 0 1867242..1868312 + 356 121594167 - Ajs_1799 - sulfate ABC transporter, periplasmic sulfate-binding protein 1732 66.24 0 1868514..1869212 + 232 121594168 - Ajs_1800 - glutathione S-transferase domain-containing protein 1733 65.03 0 1869256..1870722 + 488 121594169 - Ajs_1801 - deoxyribodipyrimidine photo-lyase type I 1734 60.79 -1 1871054..1872670 + 538 121594170 - Ajs_1802 - phage integrase family protein 1735 57.22 -1 1873051..1873632 + 193 121594171 - Ajs_1803 - resolvase domain-containing protein 1736 50.90 -2 1874137..1874916 + 259 121594172 - Ajs_1804 - hypothetical protein 1737 42.98 -2 1875801..1876163 - 120 121594173 - Ajs_1805 - hypothetical protein 1738 62.84 0 1876844..1877104 + 86 121594174 - Ajs_1806 - XRE family transcriptional regulator 1739 62.52 0 1877112..1877930 - 272 121594175 - Ajs_1807 - hypothetical protein 1740 65.54 0 1878688..1879488 - 266 121594176 - Ajs_1809 - enoyl-[acyl-carrier-protein] reductase [NADH] 1741 66.40 0 1879578..1881452 + 624 121594177 - Ajs_1810 - extracellular solute-binding protein 1742 63.58 0 1881460..1882497 + 345 121594178 - Ajs_1811 - binding-protein-dependent transport systems inner membrane component 1743 65.30 0 1882501..1883598 + 365 121594179 - Ajs_1812 - binding-protein-dependent transport systems inner membrane component 1744 70.45 0 1883620..1885257 + 545 121594180 - Ajs_1813 - ABC transporter related 1745 69.58 0 1885585..1886751 + 388 121594181 - Ajs_1814 - putative lipoprotein 1746 70.65 0 1886829..1887656 + 275 121594182 - Ajs_1815 - hydroxypyruvate isomerase 1747 72.66 +1 1888042..1888908 - 288 121594183 - Ajs_1816 - UspA domain-containing protein 1748 70.95 0 1889057..1889989 - 310 121594184 - Ajs_1817 - LysR family transcriptional regulator 1749 73.10 +1 1890086..1891438 + 450 121594185 - Ajs_1818 - hypothetical protein 1750 67.22 0 1891448..1891810 + 120 121594186 - Ajs_1819 - hypothetical protein 1751 68.19 0 1891855..1892841 + 328 121594187 - Ajs_1820 - hypothetical protein 1752 67.63 0 1892910..1894055 - 381 121594188 - Ajs_1821 - hypothetical protein 1753 64.03 0 1894185..1897061 + 958 121594189 kgd Ajs_1822 - alpha-ketoglutarate decarboxylase 1754 66.67 0 1897111..1898376 + 421 121594190 - Ajs_1823 - 2-oxoglutarate dehydrogenase E2 component 1755 64.50 0 1898466..1899893 + 475 121594191 - Ajs_1824 - dihydrolipoamide dehydrogenase 1756 63.95 0 1899971..1901074 + 367 121594192 - Ajs_1825 - AFG1 family ATPase 1757 71.03 0 1901074..1901760 + 228 121594193 - Ajs_1826 - hypothetical protein 1758 65.05 0 1901820..1902623 - 267 121594194 - Ajs_1827 - protein phosphatase 2C domain-containing protein 1759 68.51 0 1902794..1904860 + 688 121594195 - Ajs_1828 - helicase c2 1760 63.46 0 1904823..1905725 - 300 121594196 - Ajs_1829 - putative transmembrane protein 1761 63.83 0 1905731..1909294 + 1187 121594197 - Ajs_1830 - DNA polymerase III, alpha subunit 1762 62.50 0 1909333..1909740 + 135 121594198 - Ajs_1831 - ATP-dependent Clp protease adaptor protein ClpS 1763 63.94 0 1909800..1912148 + 782 121594199 - Ajs_1832 - ATP-dependent Clp protease, ATP-binding subunit clpA 1764 67.82 0 1912399..1913007 + 202 121594200 - Ajs_1833 - TetR family transcriptional regulator 1765 70.75 0 1913004..1914155 + 383 121594201 - Ajs_1834 - RND family efflux transporter MFP subunit 1766 65.75 0 1914152..1915351 + 399 121594202 - Ajs_1835 - hypothetical protein 1767 68.07 0 1915362..1916072 + 236 121594203 - Ajs_1836 - ABC transporter related 1768 73.82 +1 1916165..1917589 - 474 121594204 - Ajs_1837 - lytic murein transglycosylase 1769 68.82 0 1917634..1919073 + 479 121594205 sbcB Ajs_1838 - exonuclease I 1770 70.85 0 1919082..1919966 + 294 121594206 - Ajs_1839 - silent information regulator protein Sir2 1771 72.50 +1 1920037..1922040 + 667 121594207 - Ajs_1840 - Fis family GAF modulated sigma54 specific transcriptional regulator 1772 57.76 -1 1922296..1922643 - 115 121594208 - Ajs_1841 - hypothetical protein 1773 58.28 -1 1922640..1925678 - 1012 121594209 - Ajs_1842 - transposase Tn3 family protein 1774 61.94 0 1926335..1927159 - 274 121594210 - Ajs_1844 - integrase catalytic subunit 1775 60.22 -1 1927207..1927485 - 92 121594211 - Ajs_1845 - transposase IS3/IS911 family protein 1776 59.17 -1 1927593..1927952 + 119 121594212 - Ajs_1846 - hypothetical protein 1777 61.43 -1 1928110..1929465 + 451 121594213 - Ajs_1847 - outer membrane efflux protein 1778 57.51 -1 1929468..1931084 + 538 121594214 - Ajs_1848 - RND family efflux transporter MFP subunit 1779 59.30 -1 1931100..1934288 + 1062 121594215 - Ajs_1849 - CzcA family heavy metal efflux protein 1780 60.37 -1 1934352..1934732 + 126 121594216 - Ajs_1850 - hypothetical protein 1781 57.67 -1 1935233..1935721 - 162 121594217 - Ajs_1851 - MerR family transcriptional regulator 1782 65.01 0 1936716..1939004 + 762 121594218 - Ajs_1853 - transposase Tn3 family protein 1783 69.51 0 1939130..1939867 - 245 121594219 - Ajs_1854 - IstB ATP binding domain-containing protein 1784 68.50 0 1939904..1941427 - 507 121594220 - Ajs_1855 - integrase catalytic subunit 1785 59.12 -1 1942832..1943149 - 105 121594221 - Ajs_1857 - hypothetical protein 1786 63.96 0 1943299..1944963 - 554 121594222 - Ajs_1858 - phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase 1787 64.35 0 1945078..1945509 - 143 121594223 - Ajs_1859 - phage transcriptional regulator, AlpA 1788 64.44 0 1945732..1946943 + 403 121594224 - Ajs_1860 - hypothetical protein 1789 64.39 0 1946960..1947619 + 219 121594225 - Ajs_1861 - hypothetical protein 1790 66.97 0 1947628..1948608 + 326 121594226 - Ajs_1862 - hypothetical protein 1791 60.41 -1 1948687..1949772 + 361 121594227 - Ajs_1863 - putative transposase 1792 64.46 0 1949775..1950590 + 271 121594228 - Ajs_1864 - hypothetical protein 1793 61.77 0 1950627..1951790 + 387 121594229 - Ajs_1865 - patatin 1794 60.58 -1 1951883..1952227 + 114 121594230 - Ajs_1866 - putative sigma E regulatory protein, MucB/RseB 1795 67.97 0 1952208..1953434 - 408 121594231 - Ajs_1867 - transposase, IS204/IS1001/IS1096/IS1165 family protein 1796 56.17 -2 1955051..1955650 - 199 121594232 - Ajs_1869 - membrane protein-like protein 1797 63.27 0 1955963..1957051 - 362 121594233 - Ajs_1871 - transposase, IS4 family protein 1798 66.67 0 1957134..1957610 - 158 121594234 - Ajs_1872 - hypothetical protein 1799 63.84 0 1957630..1958301 - 223 121594235 - Ajs_1873 - PAP2 (acid phosphatase) superfamily protein-like protein 1800 61.39 -1 1958491..1959570 + 359 121594236 - Ajs_1874 - integrase catalytic subunit 1801 59.88 -1 1959656..1960156 + 166 121594237 - Ajs_1875 - hypothetical protein 1802 61.21 -1 1960193..1961035 + 280 121594238 - Ajs_1876 - hypothetical protein 66.47 MEAN 4.71 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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