version 1.0
Acidovorax sp. JS42, complete genome - 1..4448856 4007 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1150 60.71 -1 1239430..1240773 + 447 121593586 - Ajs_1174 - small GTP-binding protein 1151 54.76 -2 1240851..1241102 + 83 121593587 - Ajs_1175 - RNA chaperone Hfq 1152 60.14 -1 1241166..1242344 + 392 121593588 - Ajs_1176 - small GTP-binding protein 1153 61.21 -1 1242396..1243751 + 451 121593589 - Ajs_1177 - HflK protein 1154 58.17 -1 1243761..1244666 + 301 121593590 - Ajs_1178 - HflC protein 1155 60.56 -1 1244696..1244875 + 59 121593591 - Ajs_1179 - hypothetical protein 1156 60.49 -1 1244951..1246099 + 382 121593592 - Ajs_1180 - tRNA synthetase, class II (G, H, P and S) 1157 59.48 -1 1246129..1247505 + 458 121593593 - Ajs_1181 - adenylosuccinate synthetase 1158 54.10 -2 1247577..1248101 + 174 121593594 - Ajs_1182 - phosphoribosyltransferase 1159 58.54 -1 1253890..1254627 + 245 121593595 - Ajs_1183 - ribosomal small subunit pseudouridine synthase A 1160 62.67 0 1254787..1255761 + 324 121593596 - Ajs_1184 - hypothetical protein 1161 64.64 0 1255748..1256587 + 279 121593597 - Ajs_1185 - polysaccharide deacetylase 1162 65.27 0 1256638..1257636 + 332 121593598 - Ajs_1186 - hypothetical protein 1163 64.89 0 1257652..1258554 + 300 121593599 - Ajs_1187 - putative transmembrane protein 1164 65.09 0 1258551..1259372 + 273 121593600 - Ajs_1188 - molybdopterin binding domain-containing protein 1165 63.63 0 1259529..1260944 + 471 121593601 - Ajs_1189 - L-glutamine synthetase 1166 68.85 0 1261151..1261654 + 167 121593602 - Ajs_1190 - putative signal peptide protein 1167 68.41 0 1261671..1262759 + 362 121593603 - Ajs_1191 - signal transduction histidine kinase, nitrogen specific, NtrB 1168 70.25 0 1262811..1264346 + 511 121593604 - Ajs_1192 - nitrogen metabolism transcriptional regulator, NtrC, Fis family 1169 70.96 0 1264528..1265481 + 317 121593605 - Ajs_1193 - hypothetical protein 1170 66.54 0 1265522..1266298 - 258 121593606 - Ajs_1194 - exodeoxyribonuclease III Xth 1171 70.71 0 1266369..1266863 - 164 121593607 - Ajs_1195 - dihydrofolate reductase 1172 39.80 -2 1266866..1267561 - 231 121593608 - Ajs_1196 - hypothetical protein 1173 64.87 0 1267599..1268432 - 277 121593609 - Ajs_1197 - thymidylate synthase 1174 68.49 0 1268485..1269909 - 474 121593610 - Ajs_1198 - FAD linked oxidase domain-containing protein 1175 74.34 +1 1269951..1270367 - 138 121593611 - Ajs_1199 - membrane protein-like protein 1176 70.00 0 1270389..1271678 + 429 121593612 - Ajs_1200 - putative ribonuclease BN 1177 75.86 +1 1271703..1273007 - 434 121593613 - Ajs_1201 - amine oxidase 1178 66.55 0 1273004..1273843 - 279 121593614 - Ajs_1202 - farnesyl-diphosphate farnesyltransferase 1179 66.11 0 1273991..1274881 + 296 121593615 - Ajs_1203 - metallophosphoesterase 1180 70.18 0 1274887..1276053 + 388 121593616 - Ajs_1204 - monogalactosyldiacylglycerol synthase 1181 73.74 +1 1276139..1277029 - 296 121593617 - Ajs_1205 - squalene/phytoene synthase 1182 73.58 +1 1277117..1278274 + 385 121593618 - Ajs_1206 - RND family efflux transporter MFP subunit 1183 67.24 0 1278381..1281530 + 1049 121593619 - Ajs_1207 - acriflavin resistance protein 1184 62.93 0 1281785..1283095 + 436 121593620 tig Ajs_1208 - trigger factor 1185 60.59 -1 1283219..1283827 + 202 121593621 - Ajs_1209 - ATP-dependent Clp protease proteolytic subunit ClpP 1186 56.48 -2 1283925..1285190 + 421 121593622 clpX Ajs_1210 - ATP-dependent protease ATP-binding subunit 1187 57.29 -1 1285330..1287750 + 806 121593623 - Ajs_1211 - Lon-A peptidase 1188 62.38 0 1288148..1289383 + 411 121593624 - Ajs_1213 - phage integrase family protein 1189 66.21 0 1289444..1290976 + 510 121593625 - Ajs_1214 - integrase catalytic subunit 1190 64.48 0 1290966..1291787 + 273 121593626 - Ajs_1215 - IstB ATP binding domain-containing protein 1191 66.51 0 1291835..1292470 + 211 121593627 - Ajs_1216 - IstB ATP binding domain-containing protein 1192 64.24 0 1294231..1295220 + 329 121593628 - Ajs_1219 - transcriptional regulator 1193 60.53 -1 1295245..1295880 - 211 121593629 - Ajs_1220 - LysR family transcriptional regulator 1194 67.48 0 1296054..1296671 + 205 121593630 - Ajs_1221 - hypothetical protein 1195 66.67 0 1296668..1298338 + 556 121593631 - Ajs_1222 - integrase catalytic subunit 1196 65.77 0 1298335..1299231 + 298 121593632 - Ajs_1223 - TniB family protein 1197 64.20 0 1299303..1300721 + 472 121593633 - Ajs_1224 - hypothetical protein 1198 64.55 0 1301445..1302671 + 408 121593634 - Ajs_1225 - transposase IS116/IS110/IS902 family protein 1199 67.97 0 1302933..1304159 + 408 121593635 - Ajs_1226 - transposase, IS204/IS1001/IS1096/IS1165 family protein 1200 61.35 -1 1305583..1306485 - 300 121593636 - Ajs_1229 - LysR family transcriptional regulator 1201 63.27 0 1306498..1307586 - 362 121593637 - Ajs_1230 - transposase, IS4 family protein 1202 55.32 -2 1307658..1307798 - 46 121593638 - Ajs_1231 - hypothetical protein 1203 63.59 0 1308007..1311126 - 1039 121593639 - Ajs_1232 - CzcA family heavy metal efflux protein 1204 65.95 0 1311369..1312349 - 326 121593640 - Ajs_1234 - copper resistance B precursor 1205 63.76 0 1312375..1314267 - 630 121593641 - Ajs_1235 - CopA family copper resistance protein 1206 60.45 -1 1314511..1315170 + 219 121593642 - Ajs_1236 - two component heavy metal response transcriptional regulator 1207 60.29 -1 1315520..1316680 - 386 121593643 - Ajs_1238 - integrase catalytic subunit 1208 65.31 0 1316791..1317159 + 122 121593644 - Ajs_1239 - integrase, catalytic region 1209 63.57 0 1317323..1319257 - 644 121593645 - Ajs_1240 - iron permease FTR1 1210 59.54 -1 1319385..1319819 - 144 121593646 - Ajs_1241 - MerR family transcriptional regulator 1211 61.42 -1 1319914..1322313 + 799 121593647 - Ajs_1242 - heavy metal translocating P-type ATPase 1212 57.44 -1 1322310..1323404 + 364 121593648 - Ajs_1243 - signal peptidase II 1213 63.85 0 1323801..1325684 - 627 121593649 - Ajs_1245 - relaxase 1214 63.57 0 1325914..1326300 + 128 121593650 - Ajs_1246 - AbrB family transcriptional regulator 1215 60.35 -1 1326300..1326758 + 152 121593651 - Ajs_1247 - hypothetical protein 1216 64.81 0 1326785..1327162 + 125 121593652 - Ajs_1248 - hypothetical protein 1217 62.91 0 1327178..1328695 - 505 121593653 - Ajs_1249 - hypothetical protein 1218 71.67 +1 1328710..1329069 - 119 121593654 - Ajs_1250 - hypothetical protein 1219 67.96 0 1329066..1330460 - 464 121593655 - Ajs_1251 - hypothetical protein 1220 67.09 0 1330470..1331417 - 315 121593656 - Ajs_1252 - hypothetical protein 1221 67.11 0 1331414..1331860 - 148 121593657 - Ajs_1253 - hypothetical protein 1222 61.41 -1 1332024..1332518 - 164 121593658 - Ajs_1254 - DNA repair protein RadC 1223 67.32 0 1332698..1333462 - 254 121593659 - Ajs_1255 - hypothetical protein 1224 67.25 0 1333487..1336378 - 963 121593660 - Ajs_1256 - hypothetical protein 1225 69.56 0 1336378..1336827 - 149 121593661 - Ajs_1257 - putative secreted protein 1226 68.27 0 1336808..1338238 - 476 121593662 - Ajs_1258 - putative secreted protein 1227 72.06 +1 1338228..1339136 - 302 121593663 - Ajs_1259 - putative secreted protein 1228 68.98 0 1339133..1339825 - 230 121593664 - Ajs_1260 - putative secreted protein 1229 68.42 0 1339822..1340220 - 132 121593665 - Ajs_1261 - hypothetical protein 1230 66.39 0 1340232..1340591 - 119 121593666 - Ajs_1262 - hypothetical protein 1231 64.53 0 1340608..1340841 - 77 121593667 - Ajs_1263 - hypothetical protein 1232 72.14 +1 1340838..1341221 - 127 121593668 - Ajs_1264 - hypothetical protein 1233 59.66 -1 1341425..1341895 + 156 121593669 - Ajs_1265 - DNA binding domain-containing protein 1234 61.11 -1 1341892..1342467 + 191 121593670 - Ajs_1266 - hypothetical protein 1235 59.23 -1 1342485..1343399 + 304 121593671 - Ajs_1267 - ATPase central domain-containing protein 1236 62.00 0 1343396..1343866 + 156 121593672 - Ajs_1268 - hypothetical protein 1237 57.49 -1 1343863..1344363 + 166 121593673 - Ajs_1269 - hypothetical protein 1238 59.03 -1 1344363..1345265 + 300 121593674 - Ajs_1270 - hypothetical protein 1239 58.95 -1 1345304..1346029 + 241 121593675 - Ajs_1271 - hypothetical protein 1240 66.59 0 1346039..1348663 + 874 121593676 - Ajs_1272 - hypothetical protein 1241 64.93 0 1348704..1349453 - 249 121593677 - Ajs_1273 - hypothetical protein 1242 66.39 0 1349450..1351642 - 730 121593678 - Ajs_1274 - hypothetical protein 1243 73.59 +1 1351647..1352195 - 182 121593679 - Ajs_1275 - putative secreted protein 1244 72.25 +1 1352192..1352782 - 196 121593680 - Ajs_1276 - lytic transglycosylase, catalytic 1245 70.11 0 1352764..1353489 - 241 121593681 - Ajs_1277 - putative secreted protein 1246 68.40 0 1353506..1354141 - 211 121593682 - Ajs_1278 - hypothetical protein 1247 70.02 0 1354138..1354704 - 188 121593683 - Ajs_1279 - putative secreted protein 1248 58.68 -1 1354831..1355193 + 120 121593684 - Ajs_1280 - ArsR family transcriptional regulator 1249 62.42 0 1355196..1355690 + 164 121593685 - Ajs_1281 - protein tyrosine phosphatase 66.47 MEAN 4.71 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0