version 1.0
Acidiphilium cryptum JF-5, complete genome - 1..3389227 3063 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 782 61.32 -1 879318..881039 + 573 148259803 - Acry_0792 - hypothetical protein 783 57.78 -2 881039..882118 + 359 148259804 - Acry_0793 - BsuBIPstI restriction endonuclease domain-containing protein 784 60.70 -1 882149..884092 + 647 148259805 - Acry_0794 - ATP-dependent OLD family endonuclease 785 59.53 -1 884089..886008 + 639 148259806 - Acry_0795 - UvrD/REP helicase 786 55.05 -2 886039..886890 + 283 148259807 - Acry_0796 - hypothetical protein 787 66.51 0 886732..887985 - 417 148259808 - Acry_0797 - transposase, IS204/IS1001/IS1096/IS1165 family protein 788 62.45 -1 888350..889558 + 402 148259809 - Acry_0798 - transposase, mutator type 789 56.28 -2 889555..889920 + 121 148259810 - Acry_0799 - hypothetical protein 790 61.11 -1 890039..890830 + 263 148259811 - Acry_0800 - hypothetical protein 791 57.74 -2 890827..891621 + 264 148259812 - Acry_0801 - hypothetical protein 792 56.32 -2 891606..892523 + 305 148259813 - Acry_0802 - hypothetical protein 793 63.98 0 892850..893035 - 61 148259814 - Acry_0803 - hypothetical protein 794 61.25 -1 893061..893411 - 116 148259815 - Acry_0804 - hypothetical protein 795 62.25 -1 893412..894635 + 407 148259816 - Acry_0805 - transposase, mutator type 796 62.81 -1 894639..895442 - 267 148259817 - Acry_0806 - hypothetical protein 797 66.38 0 895655..896686 + 343 148259818 - Acry_0807 - transposase IS116/IS110/IS902 family protein 798 51.85 -2 897092..897928 - 278 148259819 - Acry_0808 - hypothetical protein 799 60.44 -1 897955..898227 - 90 148259820 - Acry_0809 - hypothetical protein 800 45.57 -2 898450..901809 - 1119 148259821 - Acry_0810 - hypothetical protein 801 45.00 -2 901806..903236 - 476 148259822 - Acry_0811 - phage integrase family protein 802 69.73 0 903410..903670 - 86 148259823 - Acry_0812 - hypothetical protein 803 70.76 0 903673..904332 - 219 148259824 - Acry_0813 - glutathione S-transferase domain-containing protein 804 71.12 0 904342..905352 - 336 148259825 - Acry_0814 - alpha/beta hydrolase domain-containing protein 805 73.33 +1 905429..905668 + 79 148259826 - Acry_0815 - hypothetical protein 806 75.51 +1 905717..906553 + 278 148259827 - Acry_0816 - dihydropteroate synthase 807 72.28 0 906629..907999 + 456 148259828 - Acry_0817 - phosphoglucosamine mutase 808 75.21 +1 908008..908826 + 272 148259829 - Acry_0818 - phosphomethylpyrimidine kinase 809 65.25 0 908866..909288 + 140 148259830 - Acry_0819 - OsmC family protein 810 68.40 0 909425..910636 + 403 148259831 - Acry_0820 - response regulator receiver protein 811 69.48 0 910889..911956 + 355 148259832 - Acry_0821 - inositol phosphatase/fructose-1,6-bisphosphatase 812 62.90 -1 911953..912828 + 291 148259833 - Acry_0822 - phosphoribulokinase 813 67.22 0 912877..913956 + 359 148259834 - Acry_0823 - fructose-bisphosphate aldolase, class II 814 65.05 0 913983..915464 + 493 148259835 rbcL Acry_0824 - ribulose bisophosphate carboxylase 815 61.07 -1 915477..915905 + 142 148259836 - Acry_0825 - ribulose-bisphosphate carboxylase 816 65.69 0 915917..916837 + 306 148259837 - Acry_0826 - ATPase central domain-containing protein 817 70.21 0 916824..917501 + 225 148259838 - Acry_0827 - ribulose-phosphate 3-epimerase 818 68.85 0 917514..918797 - 427 148259839 - Acry_0828 - cytosine deaminase 819 66.20 0 918794..919432 - 212 148259840 - Acry_0829 - pyridoxamine 5'-phosphate oxidase 820 67.62 0 919484..920320 + 278 148259841 - Acry_0830 - short-chain dehydrogenase/reductase SDR 821 67.49 0 920367..920609 - 80 148259842 - Acry_0831 - hypothetical protein 822 73.20 +1 920606..921370 - 254 148259843 - Acry_0832 - binding-protein-dependent transport systems inner membrane component 823 73.68 +1 921367..922107 - 246 148259844 - Acry_0833 - ABC transporter related 824 63.80 0 922109..923119 - 336 148259845 - Acry_0834 - ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein 825 71.73 0 923192..923527 + 111 148259846 - Acry_0835 - hypothetical protein 826 65.09 0 923585..924409 - 274 148259847 - Acry_0836 - formate/nitrite transporter 827 67.10 0 924651..924881 - 76 148259848 - Acry_0837 - hypothetical protein 828 69.81 0 924871..925698 - 275 148259849 - Acry_0838 - formate dehydrogenase family accessory protein FdhD 829 67.05 0 925695..928535 - 946 148259850 - Acry_0839 - formate dehydrogenase, alpha subunit 830 68.73 0 928548..930098 - 516 148259851 - Acry_0840 - NADH dehydrogenase (quinone) 831 70.25 0 930098..930571 - 157 148259852 - Acry_0841 - NADH dehydrogenase (ubiquinone), 24 kDa subunit 832 69.44 0 930712..931611 - 299 148259853 - Acry_0842 - LysR family transcriptional regulator 833 70.48 0 931608..932681 - 357 148259854 - Acry_0843 - alcohol dehydrogenase 834 73.74 +1 932765..934078 - 437 148259855 - Acry_0844 - FolC bifunctional protein 835 69.31 0 934075..934944 - 289 148259856 - Acry_0845 - acetyl-CoA carboxylase, carboxyl transferase, beta subunit 836 71.16 0 934955..935488 - 177 148259857 - Acry_0846 - hypothetical protein 837 72.87 0 935511..936251 - 246 148259858 - Acry_0847 - peptidase C26 838 72.02 0 936273..937487 - 404 148259859 - Acry_0848 - Bcr/CflA subfamily drug resistance transporter 839 70.77 0 937607..937996 - 129 148259860 - Acry_0849 - hypothetical protein 840 68.44 0 937993..938892 - 299 148259861 - Acry_0850 - branched-chain amino acid aminotransferase 841 71.10 0 939100..939618 + 172 148259862 - Acry_0851 - MarR family transcriptional regulator 842 74.57 +1 939615..940310 + 231 148259863 - Acry_0852 - two component transcriptional regulator 843 71.95 0 940307..941632 + 441 148259864 - Acry_0853 - integral membrane sensor signal transduction histidine kinase 844 72.73 0 941866..943350 + 494 148259865 - Acry_0854 - glycosyl transferase, group 1 845 78.39 +2 943307..944014 - 235 148259866 - Acry_0855 - hypothetical protein 846 70.50 0 944300..945811 + 503 148259867 - Acry_0856 - DEAD/DEAH box helicase domain-containing protein 847 66.01 0 945808..947034 + 408 148259868 - Acry_0857 - acyl-CoA dehydrogenase domain-containing protein 848 67.99 0 947091..947924 - 277 148259869 - Acry_0858 - hypothetical protein 849 67.86 0 948009..950438 + 809 148259870 - Acry_0859 - diguanylate cyclase/phosphodiesterase 850 73.46 +1 950490..950960 + 156 148259871 - Acry_0860 - GatB/Yqey domain-containing protein 851 73.99 +1 950957..952786 + 609 148259872 - Acry_0861 - DNA primase 852 66.04 0 952829..954745 + 638 148259873 - Acry_0862 - RNA polymerase sigma factor RpoD 853 71.17 0 954755..955354 + 199 148259874 - Acry_0863 - GCN5-related N-acetyltransferase 854 75.85 +1 955392..956066 + 224 148259875 - Acry_0864 - pseudouridine synthase 855 69.87 0 956019..957392 - 457 148259876 - Acry_0865 - Alpha,alpha-trehalose-phosphate synthase (UDP-forming) 856 75.81 +1 957395..958105 - 236 148259877 - Acry_0866 - HAD family hydrolase 857 70.22 0 958169..959686 - 505 148259878 - Acry_0867 - glycosyl transferase family protein 858 72.64 0 960451..960885 + 144 148259879 - Acry_0868 - hypothetical protein 859 68.70 0 961321..962010 - 229 148259880 - Acry_0869 - electron transport protein SCO1/SenC 860 66.33 0 962007..963470 - 487 148259881 gatB Acry_0870 - aspartyl/glutamyl-tRNA amidotransferase subunit B 861 69.57 0 963467..964948 - 493 148259882 gatA Acry_0871 - aspartyl/glutamyl-tRNA amidotransferase subunit A 862 66.32 0 964945..965232 - 95 148259883 - Acry_0872 - glutamyl-tRNA(Gln) amidotransferase, C subunit 863 71.07 0 965279..965755 + 158 148259884 - Acry_0873 - Holliday junction resolvase YqgF 864 69.95 0 965950..966864 + 304 148259885 - Acry_0874 - hypothetical protein 865 70.76 0 966965..967501 + 178 148259886 - Acry_0875 - glycoside hydrolase family protein 866 53.33 -2 967693..968277 + 194 148259887 - Acry_0876 - hypothetical protein 867 48.99 -2 968938..969480 + 180 148259888 - Acry_0877 - hypothetical protein 868 70.79 0 970200..970466 + 88 148259889 - Acry_0878 - hypothetical protein 869 48.65 -2 970564..971007 + 147 148259890 - Acry_0879 - hypothetical protein 870 75.80 +1 971120..971896 + 258 148259891 - Acry_0880 - hypothetical protein 871 64.33 0 971897..973954 - 685 148259892 - Acry_0881 - phosphoesterase 872 63.16 0 974045..974443 - 132 148259893 - Acry_0882 - lytic transglycosylase, catalytic 873 66.67 0 974524..974961 + 145 148259894 - Acry_0883 - general secretion pathway protein G 874 77.32 +1 974969..975766 - 265 148259895 - Acry_0884 - hypothetical protein 875 71.95 0 975769..978039 - 756 148259896 - Acry_0885 - general secretion pathway protein D 876 76.64 +1 978063..978413 - 116 148259897 - Acry_0886 - hypothetical protein 877 74.74 +1 978569..979150 - 193 148259898 - Acry_0887 - hypothetical protein 878 75.02 +1 979155..980207 - 350 148259899 - Acry_0888 - fimbrial assembly family protein 879 77.05 +1 980257..980853 - 198 148259900 - Acry_0889 - hypothetical protein 880 76.42 +1 980850..981218 - 122 148259901 - Acry_0890 - hypothetical protein 881 76.92 +1 981202..981669 - 155 148259902 - Acry_0891 - hypothetical protein 68.17 MEAN 5.03 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.