version 1.0
Acidiphilium cryptum JF-5, complete genome - 1..3389227 3063 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 497 64.05 0 558708..560198 - 496 148259518 - Acry_0502 - xylulokinase 498 58.63 -1 560555..561550 + 331 148259519 - Acry_0503 - periplasmic binding protein/LacI transcriptional regulator 499 65.53 0 561556..563052 + 498 148259520 - Acry_0504 - ABC transporter related 500 62.41 -1 563078..564088 + 336 148259521 - Acry_0505 - monosaccharide-transporting ATPase 501 58.89 -1 564220..564489 + 89 148259522 - Acry_0506 - histone family protein DNA-binding protein 502 65.89 0 564596..565492 - 298 148259523 - Acry_0507 - NAD-dependent epimerase/dehydratase 503 64.13 0 565706..566689 - 327 148259524 - Acry_0508 - GDP-mannose 4,6-dehydratase 504 70.40 0 566768..569014 - 748 148259525 - Acry_0509 - aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding 505 73.08 0 569007..570050 - 347 148259526 - Acry_0510 - molybdopterin dehydrogenase, FAD-binding 506 67.07 0 570047..570544 - 165 148259527 - Acry_0511 - 2Fe-2S iron-sulfur cluster binding domain-containing protein 507 68.48 0 570685..571290 + 201 148259528 - Acry_0512 - TetR family transcriptional regulator 508 65.93 0 571423..572100 + 225 148259529 - Acry_0513 - HAD family hydrolase 509 68.54 0 572146..573054 + 302 148259530 - Acry_0514 - alpha/beta hydrolase fold 510 69.92 0 573123..573737 - 204 148259531 - Acry_0515 - rare lipoprotein A 511 67.80 0 573903..574433 - 176 148259532 - Acry_0516 - hypothetical protein 512 66.30 0 574618..575442 + 274 148259533 - Acry_0517 - sulfotransferase 513 61.62 -1 575575..575970 + 131 148259534 - Acry_0518 - hypothetical protein 514 61.58 -1 576040..576570 - 176 148259535 - Acry_0519 - flavin reductase domain-containing protein 515 62.53 -1 576780..578690 - 636 148259536 - Acry_0520 - methyl-accepting chemotaxis sensory transducer 516 48.46 -2 578771..579094 + 107 148259537 - Acry_0521 - hypothetical protein 517 64.87 0 579253..582597 + 1114 148259538 - Acry_0522 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 518 64.32 0 582788..583468 + 226 148259539 - Acry_0523 - hypothetical protein 519 68.36 0 583488..584078 - 196 148259540 - Acry_0524 - hypothetical protein 520 62.95 -1 584260..585471 - 403 148259541 - Acry_0525 - hypothetical protein 521 70.62 0 585656..588436 - 926 148259542 - Acry_0526 - helicase c2 522 67.45 0 588484..589119 - 211 148259543 - Acry_0527 - uracil-DNA glycosylase superfamily protein 523 58.64 -1 589126..589698 - 190 148259544 - Acry_0528 - hypothetical protein 524 62.59 -1 589890..590306 + 138 148259545 - Acry_0529 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 525 65.69 0 590409..590819 + 136 148259546 - Acry_0530 - DNA-directed RNA polymerase, omega subunit 526 64.80 0 590857..593106 + 749 148259547 - Acry_0531 - (p)ppGpp synthetase I, SpoT/RelA 527 69.63 0 593152..593556 + 134 148259548 - Acry_0532 - holo-acyl-carrier-protein synthase 528 74.66 +1 593561..594649 + 362 148259549 - Acry_0533 - (Uracil-5)-methyltransferase 529 67.17 0 594890..596464 + 524 148259550 - Acry_0534 - 2-isopropylmalate synthase 530 68.67 0 596575..597471 - 298 148259551 - Acry_0535 - alpha/beta hydrolase fold 531 73.85 +1 597678..599195 + 505 148259552 - Acry_0536 - hypothetical protein 532 70.95 0 599010..600269 - 419 148259553 - Acry_0537 - FAD dependent oxidoreductase 533 62.42 -1 600275..601615 - 446 148259554 - Acry_0538 - glutamate--putrescine ligase 534 62.12 -1 601751..602827 - 358 148259555 - Acry_0539 - extracellular solute-binding protein 535 64.06 0 602900..603742 - 280 148259556 - Acry_0540 - binding-protein-dependent transport systems inner membrane component 536 66.35 0 603750..604682 - 310 148259557 - Acry_0541 - binding-protein-dependent transport systems inner membrane component 537 65.96 0 604679..605812 - 377 148259558 - Acry_0542 - spermidine/putrescine ABC transporter ATPase subunit 538 70.43 0 606176..607291 + 371 148259559 - Acry_0543 - alanine dehydrogenase 539 67.48 0 607294..607905 + 203 148259560 - Acry_0544 - XRE family transcriptional regulator 540 68.85 0 608158..609534 + 458 148259561 - Acry_0545 - putative aminotransferase 541 70.63 0 609536..610897 + 453 148259562 - Acry_0546 - glutamine synthetase, catalytic region 542 69.79 0 610910..611998 - 362 148259563 - Acry_0547 - radical SAM domain-containing protein 543 67.71 0 612087..613529 - 480 148259564 - Acry_0548 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 544 73.26 +1 613615..614403 + 262 148259565 - Acry_0549 - hypothetical protein 545 68.83 0 614400..615323 + 307 148259566 - Acry_0550 - hypothetical protein 546 70.55 0 615354..616049 - 231 148259567 - Acry_0551 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 547 69.82 0 616305..617255 + 316 148259568 lpxC Acry_0552 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 548 71.78 0 617296..618939 - 547 148259569 - Acry_0553 - ABC transporter, transmembrane region, type 1 549 70.22 0 618939..620654 - 571 148259570 - Acry_0554 - ABC transporter, transmembrane region, type 1 550 73.24 +1 620823..621659 + 278 148259571 - Acry_0555 - pantoate--beta-alanine ligase 551 69.28 0 621759..622676 + 305 148259572 - Acry_0556 - diguanylate phosphodiesterase 552 73.87 +1 622728..623060 + 110 148259573 - Acry_0557 - hypothetical protein 553 69.36 0 623060..623542 + 160 148259574 - Acry_0558 - hypothetical protein 554 65.37 0 623539..625305 + 588 148259575 - Acry_0559 - ABC transporter 555 72.17 0 625321..626247 + 308 148259576 - Acry_0560 - glycerophosphoryl diester phosphodiesterase 556 70.30 0 627119..628165 + 348 148259577 - Acry_0561 - secretion protein HlyD family protein 557 65.83 0 628162..629712 + 516 148259578 - Acry_0562 - EmrB/QacA family drug resistance transporter 558 69.62 0 629702..631261 + 519 148259579 - Acry_0563 - RND efflux system outer membrane lipoprotein 559 71.30 0 631266..632279 - 337 148259580 - Acry_0564 - luciferase family protein 560 63.58 0 632365..633594 - 409 148259581 - Acry_0565 - isocitrate dehydrogenase 561 67.08 0 633710..634438 + 242 148259582 pyrE Acry_0566 - orotate phosphoribosyltransferase 562 64.90 0 634908..636041 + 377 148259583 - Acry_0567 - diguanylate cyclase 563 70.37 0 636115..638898 - 927 148259584 - Acry_0568 - glycoside hydrolase family 3 protein 564 66.45 0 638908..641184 - 758 148259585 - Acry_0569 - cellulose synthase (UDP-forming) 565 68.44 0 641181..642311 - 376 148259586 - Acry_0570 - endo-1,4-D-glucanase 566 65.85 0 642316..643050 - 244 148259587 - Acry_0571 - hypothetical protein 567 68.96 0 643047..645353 - 768 148259588 - Acry_0572 - hypothetical protein 568 63.00 -1 646186..646458 + 90 148259589 - Acry_0573 - hypothetical protein 569 58.17 -1 646486..647238 - 250 148259590 - Acry_0574 - two component transcriptional regulator 570 63.99 0 647467..647802 - 111 148259591 - Acry_0575 - hypothetical protein 571 65.96 0 647763..648470 - 235 148259592 - Acry_0576 - CRP/FNR family transcriptional regulator 572 69.43 0 648663..649385 + 240 148259593 - Acry_0577 - two component transcriptional regulator 573 69.62 0 649401..651299 - 632 148259594 - Acry_0578 - PAS/PAC sensor hybrid histidine kinase 574 66.45 0 651580..652041 + 153 148259595 - Acry_0579 - membrane-flanked domain-containing protein 575 73.11 0 652232..653053 - 273 148259596 - Acry_0580 - hypothetical protein 576 72.78 0 653209..654663 + 484 148259597 - Acry_0581 - hypothetical protein 577 76.75 +1 654707..655846 + 379 148259598 recF Acry_0582 - recombination protein F 578 72.37 0 655896..656825 - 309 148259599 - Acry_0583 - riboflavin biosynthesis protein RibF 579 68.14 0 656822..657364 - 180 148259600 - Acry_0584 - dehydratase 580 70.85 0 657345..658277 - 310 148259601 - Acry_0585 - glycosyl transferase family protein 581 73.47 +1 658402..659577 + 391 148259602 - Acry_0586 - hypothetical protein 582 70.33 0 659583..661058 + 491 148259603 - Acry_0587 - major facilitator transporter 583 71.84 0 661089..662828 + 579 148259604 - Acry_0588 - ABC transporter related 584 79.08 +2 663071..663682 + 203 148259605 - Acry_0589 - hypothetical protein 585 69.20 0 663877..665019 + 380 148259606 - Acry_0590 - glycosyl transferase, group 1 586 59.40 -1 665025..665795 + 256 148259607 - Acry_0591 - glucose-1-phosphate cytidylyltransferase 587 66.57 0 665792..666868 + 358 148259608 - Acry_0592 - CDP-glucose 4,6-dehydratase 588 64.13 0 666868..667419 + 183 148259609 - Acry_0593 - dTDP-4-dehydrorhamnose 3,5-epimerase 589 61.93 -1 667416..668639 + 407 148259610 - Acry_0594 - C-methyltransferase 590 50.25 -2 668788..669804 + 338 148259611 - Acry_0595 - hypothetical protein 591 60.38 -1 669955..670797 + 280 148259612 - Acry_0596 - NAD-dependent epimerase/dehydratase 592 55.64 -2 670924..671694 + 256 148259613 - Acry_0597 - cephalosporin hydroxylase 593 60.35 -1 672876..674489 + 537 148259614 - Acry_0599 - methyl-accepting chemotaxis sensory transducer 594 64.68 0 674489..675043 + 184 148259615 - Acry_0600 - electron transport protein SCO1/SenC 595 72.72 0 675332..676141 + 269 148259616 - Acry_0601 - hypothetical protein 596 69.59 0 676190..677011 + 273 148259617 - Acry_0602 - hypothetical protein 68.17 MEAN 5.03 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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