version 1.0
Acidiphilium cryptum JF-5, complete genome - 1..3389227 3063 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2376 75.43 +1 2657935..2658402 + 155 148261397 - Acry_2411 - DNA polymerase III subunit chi 2377 72.01 0 2658451..2660040 + 529 148261398 - Acry_2412 - TPR repeat-containing protein 2378 73.40 +1 2660048..2661220 - 390 148261399 - Acry_2413 - hypothetical protein 2379 72.04 0 2661333..2662262 + 309 148261400 - Acry_2414 - LysR family transcriptional regulator 2380 69.51 0 2662311..2663399 + 362 148261401 - Acry_2415 - glycosyl transferase family protein 2381 68.33 0 2663412..2663771 - 119 148261402 - Acry_2416 - hypothetical protein 2382 65.80 0 2663761..2664801 - 346 148261403 - Acry_2417 - glycosyl transferase family protein 2383 69.28 0 2664838..2666331 - 497 148261404 - Acry_2418 - membrane protein-like protein 2384 62.31 -1 2666526..2666846 - 106 148261405 - Acry_2419 - hypothetical protein 2385 51.10 -2 2668119..2668934 - 271 148261406 - Acry_2420 - hypothetical protein 2386 57.08 -2 2669235..2671769 - 844 148261407 - Acry_2421 - hypothetical protein 2387 53.38 -2 2671762..2673357 - 531 148261408 - Acry_2422 - site-specific DNA-methyltransferase (adenine-specific) 2388 55.25 -2 2673354..2674010 - 218 148261409 - Acry_2423 - hypothetical protein 2389 61.36 -1 2674385..2677156 - 923 148261410 - Acry_2424 - exonuclease V subunit alpha 2390 58.02 -2 2677156..2679006 - 616 148261411 - Acry_2425 - Type IV secretory pathway VirD4 components-like protein 2391 37.10 -2 2680131..2681060 - 309 148261412 - Acry_2427 - hypothetical protein 2392 57.81 -2 2681060..2682256 - 398 148261413 - Acry_2428 - phage integrase family protein 2393 73.18 0 2682514..2683788 - 424 148261414 - Acry_2429 - type III effector Hrp-dependent outer protein 2394 70.28 0 2683785..2684558 - 257 148261415 - Acry_2430 - hydroxypyruvate isomerase 2395 73.36 +1 2684586..2685497 - 303 148261416 - Acry_2431 - 3-hydroxyisobutyrate dehydrogenase 2396 73.22 +1 2685543..2686640 - 365 148261417 - Acry_2432 - alanine racemase 2397 68.76 0 2686758..2687666 + 302 148261418 - Acry_2433 - 6-phosphogluconate dehydrogenase, NAD-binding 2398 71.70 0 2687663..2688298 + 211 148261419 - Acry_2434 - putative aldolase 2399 72.71 0 2688314..2688892 - 192 148261420 - Acry_2435 - antibiotic biosynthesis monooxygenase 2400 70.39 0 2688897..2689487 - 196 148261421 - Acry_2436 - hypothetical protein 2401 71.92 0 2689677..2691161 + 494 148261422 - Acry_2437 - major facilitator transporter 2402 72.49 0 2691437..2694856 + 1139 148261423 - Acry_2438 - indolepyruvate ferredoxin oxidoreductase 2403 74.84 +1 2694857..2695921 - 354 148261424 - Acry_2439 - putative ammonia monooxygenase 2404 68.00 0 2696066..2696968 - 300 148261425 - Acry_2440 - LysR family transcriptional regulator 2405 69.56 0 2697018..2698055 - 345 148261426 - Acry_2441 - thioredoxin reductase 2406 72.39 0 2698132..2698638 + 168 148261427 - Acry_2442 - AsnC family transcriptional regulator 2407 67.82 0 2698747..2699610 + 287 148261428 - Acry_2443 - membrane protein-like protein 2408 65.82 0 2699706..2702063 + 785 148261429 - Acry_2444 - surface antigen (D15) 2409 68.33 0 2702068..2702847 + 259 148261430 - Acry_2445 - outer membrane chaperone Skp (OmpH) 2410 73.02 0 2702853..2703938 + 361 148261431 lpxD Acry_2446 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 2411 66.27 0 2703980..2704477 + 165 148261432 - Acry_2447 - beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2412 70.76 0 2704474..2705280 + 268 148261433 - Acry_2448 - UDP-N-acetylglucosamine acyltransferase 2413 75.46 +1 2705305..2706168 + 287 148261434 - Acry_2449 - hypothetical protein 2414 60.56 -1 2706165..2706557 + 130 148261435 - Acry_2450 - lactoylglutathione lyase 2415 70.98 0 2706565..2707839 + 424 148261436 - Acry_2451 - hypothetical protein 2416 79.12 +2 2707870..2708439 - 189 148261437 - Acry_2452 - hypothetical protein 2417 73.78 +1 2708493..2708984 - 163 148261438 - Acry_2453 - hypothetical protein 2418 29.41 -2 2709668..2710126 - 152 148261439 - Acry_2454 - hypothetical protein 2419 55.99 -2 2710274..2710582 - 102 148261440 - Acry_2455 - hypothetical protein 2420 66.51 0 2710629..2711882 - 417 148261441 - Acry_2456 - transposase, IS204/IS1001/IS1096/IS1165 family protein 2421 44.58 -2 2712410..2713138 - 242 148261442 - Acry_2458 - hypothetical protein 2422 69.90 0 2713440..2713964 - 174 148261443 - Acry_2459 - ribosomal protein N-acetylase-like protein 2423 66.79 0 2714205..2715884 - 559 148261444 - Acry_2460 - putative ABC transporter ATP-binding protein 2424 63.73 0 2716074..2716685 - 203 148261445 - Acry_2461 - hypothetical protein 2425 71.91 0 2716841..2717812 - 323 148261446 - Acry_2462 - 2-dehydropantoate 2-reductase 2426 72.91 0 2717809..2719329 - 506 148261447 - Acry_2463 - AMP-dependent synthetase and ligase 2427 76.36 +1 2719436..2720560 - 374 148261448 - Acry_2464 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 2428 67.15 0 2720577..2720783 - 68 148261449 - Acry_2465 - heavy metal transport/detoxification protein 2429 75.47 +1 2720940..2723177 + 745 148261450 - Acry_2466 - heavy metal translocating P-type ATPase 2430 68.28 0 2723185..2723928 - 247 148261451 - Acry_2467 - short-chain dehydrogenase/reductase SDR 2431 66.02 0 2723941..2724867 - 308 148261452 - Acry_2468 - dihydrodipicolinate synthetase 2432 67.37 0 2724864..2725862 - 332 148261453 - Acry_2469 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 2433 69.07 0 2725859..2727562 - 567 148261454 - Acry_2470 - dihydroxy-acid dehydratase 2434 72.06 0 2727565..2728287 - 240 148261455 - Acry_2471 - hypothetical protein 2435 63.11 -1 2728689..2729138 - 149 148261456 - Acry_2472 - hypothetical protein 2436 70.56 0 2729135..2729827 - 230 148261457 - Acry_2473 - HAD family hydrolase 2437 69.97 0 2729824..2730912 - 362 148261458 - Acry_2474 - ferrochelatase 2438 70.66 0 2730918..2731994 - 358 148261459 - Acry_2475 - uroporphyrinogen decarboxylase 2439 71.56 0 2732263..2733141 + 292 148261460 - Acry_2476 - hypothetical protein 2440 73.58 +1 2733248..2733739 + 163 148261461 - Acry_2477 - methylated-DNA--protein-cysteine methyltransferase 2441 71.17 0 2733759..2734736 + 325 148261462 - Acry_2478 - alcohol dehydrogenase 2442 69.44 0 2734897..2735184 + 95 148261463 - Acry_2479 - hypothetical protein 2443 69.13 0 2735328..2735774 + 148 148261464 - Acry_2480 - CHRD domain-containing protein 2444 70.60 0 2735845..2736276 + 143 148261465 - Acry_2481 - dihydroneopterin aldolase 2445 72.79 0 2736283..2737539 - 418 148261466 - Acry_2482 - natural resistance-associated macrophage protein 2446 79.23 +2 2737536..2738888 - 450 148261467 - Acry_2483 - 3-carboxy-cis,cis-muconate cycloisomerase 2447 68.89 0 2738971..2740365 + 464 148261468 - Acry_2484 - permease for cytosine/purines, uracil, thiamine, allantoin 2448 71.50 0 2741189..2741602 - 137 148261469 - Acry_2485 - Sel1 domain-containing protein 2449 68.53 0 2741957..2742385 - 142 148261470 - Acry_2486 - hypothetical protein 2450 71.69 0 2742894..2743331 - 145 148261471 - Acry_2487 - hypothetical protein 2451 67.24 0 2743713..2744237 + 174 148261472 - Acry_2488 - inorganic diphosphatase 2452 74.33 +1 2744287..2745147 - 286 148261473 - Acry_2489 - NAD-dependent epimerase/dehydratase 2453 71.39 0 2745144..2745800 - 218 148261474 - Acry_2490 - hypothetical protein 2454 69.40 0 2745844..2746026 - 60 148261475 - Acry_2491 - hypothetical protein 2455 70.09 0 2746073..2746393 + 106 148261476 - Acry_2492 - hypothetical protein 2456 75.45 +1 2746586..2747143 + 185 148261477 - Acry_2493 - 5-formyltetrahydrofolate cyclo-ligase 2457 72.69 0 2747165..2748310 + 381 148261478 - Acry_2494 - aminotransferase, class I and II 2458 71.25 0 2749064..2750002 - 312 148261479 - Acry_2496 - signal recognition particle-docking protein FtsY 2459 72.49 0 2749999..2751234 - 411 148261480 - Acry_2497 - MiaB-like tRNA modifying enzyme 2460 72.42 0 2751231..2752064 - 277 148261481 - Acry_2498 - diaminopimelate epimerase 2461 71.50 0 2752107..2753576 - 489 148261482 - Acry_2499 - amino acid permease-associated region 2462 73.44 +1 2753573..2754295 - 240 148261483 - Acry_2500 - endonuclease III 2463 68.32 0 2754348..2754893 + 181 148261484 - Acry_2501 - integral membrane protein-like protein 2464 72.93 0 2754966..2756114 + 382 148261485 - Acry_2502 - major facilitator transporter 2465 66.18 0 2756210..2757859 - 549 148261486 groEL Acry_2503 - chaperonin GroEL 2466 64.44 0 2757904..2758218 - 104 148261487 - Acry_2504 - chaperonin Cpn10 2467 63.61 0 2758436..2758762 + 108 148261488 - Acry_2505 - Usg family protein 2468 68.83 0 2758882..2759712 + 276 148261489 - Acry_2506 - hypothetical protein 2469 73.95 +1 2759837..2761222 + 461 148261490 - Acry_2507 - phage uncharacterized protein 2470 69.50 0 2761227..2762639 + 470 148261491 - Acry_2508 - hypothetical protein 2471 74.88 +1 2762636..2763061 + 141 148261492 - Acry_2509 - hypothetical protein 2472 65.84 0 2763161..2764483 + 440 148261493 - Acry_2510 - hypothetical protein 2473 73.46 +1 2764497..2764805 + 102 148261494 - Acry_2511 - hypothetical protein 2474 69.61 0 2764807..2765214 + 135 148261495 - Acry_2512 - hypothetical protein 2475 75.35 +1 2765222..2765866 + 214 148261496 - Acry_2513 - hypothetical protein 68.17 MEAN 5.03 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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