version 1.0
Acidiphilium cryptum JF-5, complete genome - 1..3389227 3063 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2307 66.51 0 2572946..2574199 + 417 148261328 - Acry_2342 - transposase, IS204/IS1001/IS1096/IS1165 family protein 2308 72.48 0 2574218..2575387 + 389 148261329 - Acry_2343 - deoxyribodipyrimidine photo-lyase 2309 66.90 0 2575415..2575840 + 141 148261330 - Acry_2344 - hypothetical protein 2310 68.96 0 2575833..2577008 + 391 148261331 - Acry_2345 - hypothetical protein 2311 69.24 0 2577008..2578132 + 374 148261332 - Acry_2346 - hypothetical protein 2312 67.90 0 2578333..2578656 + 107 148261333 - Acry_2347 - hypothetical protein 2313 65.01 0 2578862..2579767 + 301 148261334 - Acry_2348 - phage integrase family protein 2314 67.00 0 2579772..2580965 + 397 148261335 - Acry_2349 - putative transposase 2315 60.00 -1 2581573..2582007 - 144 148261336 - Acry_2350 - globin 2316 63.48 0 2582028..2583062 - 344 148261337 - Acry_2351 - hypothetical protein 2317 65.19 0 2583946..2585640 + 564 148261338 - Acry_2352 - resolvase domain-containing protein 2318 59.14 -1 2591485..2592441 - 318 148261339 - Acry_2353 - NAD-dependent epimerase/dehydratase 2319 66.33 0 2592450..2593049 - 199 148261340 - Acry_2354 - phosphoheptose isomerase 2320 62.98 -1 2593039..2593905 - 288 148261341 - Acry_2355 - 3-hydroxybutyrate dehydrogenase 2321 60.70 -1 2594160..2594444 + 94 148261342 - Acry_2356 - hypothetical protein 2322 69.54 0 2594673..2595263 - 196 148261343 - Acry_2357 - SOUL heme-binding protein 2323 62.57 -1 2595950..2596657 + 235 148261344 - Acry_2358 - transposase, IS4 family protein 2324 70.27 0 2596666..2597304 - 212 148261345 - Acry_2359 - hypothetical protein 2325 74.31 +1 2597423..2597893 - 156 148261346 - Acry_2360 - ferric uptake regulator family protein 2326 67.70 0 2598015..2599667 + 550 148261347 - Acry_2361 - AMP-dependent synthetase and ligase 2327 72.60 0 2599785..2600963 + 392 148261348 - Acry_2362 - major facilitator transporter 2328 71.41 0 2600973..2601962 - 329 148261349 - Acry_2363 - alcohol dehydrogenase 2329 68.90 0 2602044..2603831 - 595 148261350 aspS Acry_2364 - aspartyl-tRNA synthetase 2330 72.52 0 2603916..2605094 + 392 148261351 - Acry_2365 - ribonuclease D 2331 74.42 +1 2605095..2605868 - 257 148261352 - Acry_2366 - ABC-3 protein 2332 76.31 +1 2605870..2606709 - 279 148261353 - Acry_2367 - ABC-3 protein 2333 71.94 0 2606719..2607534 - 271 148261354 - Acry_2368 - ABC transporter related 2334 72.86 0 2607531..2608451 - 306 148261355 - Acry_2369 - periplasmic solute binding protein 2335 61.90 -1 2608579..2608809 + 76 148261356 - Acry_2370 - 4-oxalocrotonate tautomerase 2336 72.81 0 2608806..2609342 + 178 148261357 - Acry_2371 - hypothetical protein 2337 74.12 +1 2609311..2610585 - 424 148261358 - Acry_2372 - hydroxypyruvate reductase 2338 74.58 +1 2610693..2611526 - 277 148261359 - Acry_2373 - hypothetical protein 2339 64.43 0 2611598..2611954 - 118 148261360 - Acry_2374 - hypothetical protein 2340 71.01 0 2612030..2613019 - 329 148261361 - Acry_2375 - lysine--tRNA ligase 2341 72.70 0 2613043..2614020 + 325 148261362 - Acry_2376 - lysine 2,3-aminomutase YodO family protein 2342 64.89 0 2614033..2614482 + 149 148261363 - Acry_2377 - 3-dehydroquinate dehydratase 2343 72.88 0 2614479..2614961 + 160 148261364 - Acry_2378 - acetyl-CoA carboxylase, biotin carboxyl carrier protein 2344 67.56 0 2614969..2616315 + 448 148261365 - Acry_2379 - acetyl-CoA carboxylase biotin carboxylase subunit 2345 67.17 0 2616327..2617127 - 266 148261366 - Acry_2380 - hypothetical protein 2346 65.49 0 2617229..2619601 + 790 148261367 - Acry_2381 - diguanylate cyclase/phosphodiesterase 2347 67.32 0 2619699..2621990 + 763 148261368 - Acry_2382 - oxidoreductase alpha (molybdopterin) subunit 2348 61.85 -1 2622107..2622832 - 241 148261369 - Acry_2383 - major intrinsic protein 2349 67.13 0 2622868..2624367 - 499 148261370 - Acry_2384 - glycerol kinase 2350 70.30 0 2624498..2626039 - 513 148261371 glpD Acry_2385 - glycerol-3-phosphate dehydrogenase 2351 68.77 0 2626157..2626963 - 268 148261372 - Acry_2386 - DeoR family transcriptional regulator 2352 70.36 0 2627258..2628775 + 505 148261373 - Acry_2387 - methyl-accepting chemotaxis sensory transducer 2353 66.78 0 2628904..2629779 + 291 148261374 - Acry_2388 - glutathione S-transferase domain-containing protein 2354 70.08 0 2629807..2631270 + 487 148261375 - Acry_2389 - aldehyde dehydrogenase 2355 70.91 0 2631294..2632754 - 486 148261376 - Acry_2390 - gamma-aminobutyraldehyde dehydrogenase 2356 65.70 0 2632735..2634285 - 516 148261377 - Acry_2391 - amino acid permease-associated region 2357 74.00 +1 2634307..2635452 - 381 148261378 - Acry_2392 - helix-turn-helix domain-containing protein 2358 67.00 0 2635501..2636982 + 493 148261379 - Acry_2393 - glutamine synthetase, catalytic region 2359 72.56 0 2636989..2638158 + 389 148261380 - Acry_2394 - iron-containing alcohol dehydrogenase 2360 65.93 0 2638307..2639386 + 359 148261381 - Acry_2395 - diguanylate cyclase 2361 70.09 0 2639419..2642838 + 1139 148261382 dnaE Acry_2396 - DNA polymerase III subunit alpha 2362 68.97 0 2642922..2644091 + 389 148261383 - Acry_2397 - acetyl-CoA acetyltransferase 2363 70.40 0 2644156..2644905 - 249 148261384 - Acry_2398 - short-chain dehydrogenase/reductase SDR 2364 71.01 0 2645032..2646021 - 329 148261385 - Acry_2399 - NAD-dependent epimerase/dehydratase 2365 70.45 0 2646190..2646585 - 131 148261386 - Acry_2400 - cupin 2 domain-containing protein 2366 64.11 0 2646653..2647279 - 208 148261387 - Acry_2401 - methyltransferase type 11 2367 71.40 0 2647433..2648911 + 492 148261388 - Acry_2402 - amidase 2368 72.24 0 2648931..2649809 - 292 148261389 - Acry_2403 - parB-like partition protein 2369 67.68 0 2649806..2650597 - 263 148261390 - Acry_2404 - cobyrinic acid a,c-diamide synthase 2370 67.89 0 2650587..2651240 - 217 148261391 - Acry_2405 - methyltransferase GidB 2371 71.63 0 2651237..2652967 - 576 148261392 - Acry_2406 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 2372 73.35 +1 2653003..2654304 - 433 148261393 - Acry_2407 - tRNA modification GTPase TrmE 2373 72.49 0 2654301..2654489 - 62 148261394 - Acry_2408 - ferredoxin-like protein 2374 71.28 0 2654574..2656805 + 743 148261395 - Acry_2409 - hypothetical protein 2375 73.22 +1 2656848..2657930 + 360 148261396 - Acry_2410 - ATPase involved in chromosome partitioning-like protein 2376 75.43 +1 2657935..2658402 + 155 148261397 - Acry_2411 - DNA polymerase III subunit chi 2377 72.01 0 2658451..2660040 + 529 148261398 - Acry_2412 - TPR repeat-containing protein 2378 73.40 +1 2660048..2661220 - 390 148261399 - Acry_2413 - hypothetical protein 2379 72.04 0 2661333..2662262 + 309 148261400 - Acry_2414 - LysR family transcriptional regulator 2380 69.51 0 2662311..2663399 + 362 148261401 - Acry_2415 - glycosyl transferase family protein 2381 68.33 0 2663412..2663771 - 119 148261402 - Acry_2416 - hypothetical protein 2382 65.80 0 2663761..2664801 - 346 148261403 - Acry_2417 - glycosyl transferase family protein 2383 69.28 0 2664838..2666331 - 497 148261404 - Acry_2418 - membrane protein-like protein 2384 62.31 -1 2666526..2666846 - 106 148261405 - Acry_2419 - hypothetical protein 2385 51.10 -2 2668119..2668934 - 271 148261406 - Acry_2420 - hypothetical protein 2386 57.08 -2 2669235..2671769 - 844 148261407 - Acry_2421 - hypothetical protein 2387 53.38 -2 2671762..2673357 - 531 148261408 - Acry_2422 - site-specific DNA-methyltransferase (adenine-specific) 2388 55.25 -2 2673354..2674010 - 218 148261409 - Acry_2423 - hypothetical protein 2389 61.36 -1 2674385..2677156 - 923 148261410 - Acry_2424 - exonuclease V subunit alpha 2390 58.02 -2 2677156..2679006 - 616 148261411 - Acry_2425 - Type IV secretory pathway VirD4 components-like protein 2391 37.10 -2 2680131..2681060 - 309 148261412 - Acry_2427 - hypothetical protein 2392 57.81 -2 2681060..2682256 - 398 148261413 - Acry_2428 - phage integrase family protein 2393 73.18 0 2682514..2683788 - 424 148261414 - Acry_2429 - type III effector Hrp-dependent outer protein 2394 70.28 0 2683785..2684558 - 257 148261415 - Acry_2430 - hydroxypyruvate isomerase 2395 73.36 +1 2684586..2685497 - 303 148261416 - Acry_2431 - 3-hydroxyisobutyrate dehydrogenase 2396 73.22 +1 2685543..2686640 - 365 148261417 - Acry_2432 - alanine racemase 2397 68.76 0 2686758..2687666 + 302 148261418 - Acry_2433 - 6-phosphogluconate dehydrogenase, NAD-binding 2398 71.70 0 2687663..2688298 + 211 148261419 - Acry_2434 - putative aldolase 2399 72.71 0 2688314..2688892 - 192 148261420 - Acry_2435 - antibiotic biosynthesis monooxygenase 2400 70.39 0 2688897..2689487 - 196 148261421 - Acry_2436 - hypothetical protein 2401 71.92 0 2689677..2691161 + 494 148261422 - Acry_2437 - major facilitator transporter 2402 72.49 0 2691437..2694856 + 1139 148261423 - Acry_2438 - indolepyruvate ferredoxin oxidoreductase 2403 74.84 +1 2694857..2695921 - 354 148261424 - Acry_2439 - putative ammonia monooxygenase 2404 68.00 0 2696066..2696968 - 300 148261425 - Acry_2440 - LysR family transcriptional regulator 2405 69.56 0 2697018..2698055 - 345 148261426 - Acry_2441 - thioredoxin reductase 2406 72.39 0 2698132..2698638 + 168 148261427 - Acry_2442 - AsnC family transcriptional regulator 68.17 MEAN 5.03 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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