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Acidiphilium cryptum JF-5, complete genome - 1..3389227 3063 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2206 70.22 0 2471963..2472751 + 262 148261227 - Acry_2240 - regulatory protein, IclR 2207 68.93 0 2473227..2475167 + 646 148261228 - Acry_2241 - peptidoglycan glycosyltransferase 2208 71.59 0 2475225..2475914 + 229 148261229 - Acry_2242 - GntR family transcriptional regulator 2209 62.59 -1 2476217..2476780 - 187 148261230 - Acry_2243 - beta-Ig-H3/fasciclin 2210 71.71 0 2476936..2478165 - 409 148261231 argJ Acry_2244 - bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 2211 66.24 0 2478176..2479111 - 311 148261232 - Acry_2245 - PpiC-type peptidyl-prolyl cis-trans isomerase 2212 64.96 0 2479294..2482113 + 939 148261233 secA Acry_2246 - preprotein translocase subunit SecA 2213 66.10 0 2482118..2482648 + 176 148261234 - Acry_2247 - hypothetical protein 2214 64.73 0 2482744..2483208 - 154 148261235 - Acry_2248 - transcriptional regulator, TrmB 2215 68.70 0 2483365..2483856 - 163 148261236 rpsI Acry_2249 - 30S ribosomal protein S9 2216 62.05 -1 2483859..2484335 - 158 148261237 rplM Acry_2250 - 50S ribosomal protein L13 2217 73.53 +1 2484427..2485359 - 310 148261238 - Acry_2251 - NAD-dependent epimerase/dehydratase 2218 63.64 0 2485385..2485978 - 197 148261239 - Acry_2252 - polyhydroxyalkonate synthesis repressor, PhaR 2219 70.69 0 2486088..2486858 - 256 148261240 - Acry_2253 - hypothetical protein 2220 70.68 0 2486931..2487329 + 132 148261241 - Acry_2254 - hypothetical protein 2221 72.29 0 2487343..2488338 + 331 148261242 - Acry_2255 - alpha/beta hydrolase fold 2222 69.99 0 2488395..2489567 + 390 148261243 - Acry_2256 - acetyl-CoA acetyltransferase 2223 65.95 0 2489592..2490293 + 233 148261244 - Acry_2257 - 3-oxoacid CoA-transferase, A subunit 2224 64.32 0 2490304..2490984 + 226 148261245 - Acry_2258 - 3-oxoacid CoA-transferase, B subunit 2225 68.70 0 2490981..2492261 + 426 148261246 - Acry_2259 - 4-aminobutyrate aminotransferase 2226 70.60 0 2492268..2494301 - 677 148261247 - Acry_2260 - hypothetical protein 2227 68.22 0 2494355..2494741 - 128 148261248 - Acry_2261 - hypothetical protein 2228 62.70 -1 2494956..2495837 + 293 148261249 - Acry_2262 - helix-turn-helix domain-containing protein 2229 67.95 0 2495890..2496744 + 284 148261250 - Acry_2263 - rhodanese domain-containing protein 2230 68.50 0 2496741..2497997 + 418 148261251 - Acry_2264 - cystathionine beta-lyase 2231 65.81 0 2497994..2498344 + 116 148261252 - Acry_2265 - phosphoribosyl-AMP cyclohydrolase 2232 63.71 0 2498489..2498860 - 123 148261253 - Acry_2266 - iron-sulfur cluster assembly accessory protein 2233 66.94 0 2498871..2499236 - 121 148261254 - Acry_2267 - hypothetical protein 2234 72.59 0 2499226..2499681 - 151 148261255 - Acry_2268 - NifU family SUF system FeS assembly protein 2235 69.08 0 2499678..2500922 - 414 148261256 - Acry_2269 - SufS subfamily cysteine desulfurase 2236 72.58 0 2500919..2502118 - 399 148261257 - Acry_2270 - FeS assembly protein SufD 2237 66.53 0 2502115..2502858 - 247 148261258 - Acry_2271 - FeS assembly ATPase SufC 2238 63.71 0 2502868..2504319 - 483 148261259 - Acry_2272 - cysteine desulfurase activator complex subunit SufB 2239 68.37 0 2504499..2504792 - 97 148261260 - Acry_2273 - BadM/Rrf2 family transcriptional regulator 2240 68.82 0 2504917..2505567 - 216 148261261 - Acry_2274 - phosphoglycolate phosphatase 2241 72.37 0 2505640..2506953 + 437 148261262 - Acry_2275 - nucleotidyl transferase 2242 67.98 0 2506953..2508776 + 607 148261263 - Acry_2276 - D-fructose-6-phosphate amidotransferase 2243 61.60 -1 2508851..2509501 - 216 148261264 - Acry_2277 - hypothetical protein 2244 70.30 0 2509554..2509718 + 54 148261265 - Acry_2278 - hypothetical protein 2245 62.67 -1 2509890..2510189 - 99 148261266 - Acry_2279 - hypothetical protein 2246 78.12 +1 2510365..2510853 - 162 148261267 - Acry_2280 - bacteriochlorophyll 4-vinyl reductase 2247 65.58 0 2510964..2512526 - 520 148261268 - Acry_2281 - magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase 2248 66.99 0 2512789..2513097 - 102 148261269 - Acry_2282 - hypothetical protein 2249 60.56 -1 2513175..2513567 + 130 148261270 - Acry_2283 - hypothetical protein 2250 67.35 0 2513607..2514044 + 145 148261271 - Acry_2284 - hypothetical protein 2251 67.86 0 2514351..2515106 - 251 148261272 - Acry_2285 - HpcH/HpaI aldolase 2252 67.69 0 2515183..2515863 + 226 148261273 - Acry_2286 - pyrrolidone-carboxylate peptidase 2253 65.71 0 2516160..2516996 - 278 148261274 - Acry_2287 - alpha/beta hydrolase fold 2254 65.58 0 2517021..2518955 - 644 148261275 - Acry_2288 - acetate--CoA ligase 2255 67.94 0 2519040..2521313 - 757 148261276 - Acry_2289 - malic enzyme 2256 70.31 0 2521571..2522257 + 228 148261277 - Acry_2290 - lipoate-protein ligase B 2257 69.60 0 2522262..2523728 - 488 148261278 - Acry_2291 - polysaccharide biosynthesis protein 2258 71.11 0 2524519..2524788 - 89 148261279 - Acry_2292 - hypothetical protein 2259 58.24 -1 2525298..2525558 + 86 148261280 - Acry_2293 - hypothetical protein 2260 59.88 -1 2525578..2525901 - 107 148261281 - Acry_2294 - hypothetical protein 2261 68.20 0 2526379..2526639 - 86 148261282 - Acry_2295 - hypothetical protein 2262 65.96 0 2526743..2528584 - 613 148261283 - Acry_2296 - hypothetical protein 2263 67.32 0 2528675..2528980 - 101 148261284 - Acry_2297 - hypothetical protein 2264 69.60 0 2528977..2529624 - 215 148261285 - Acry_2298 - hypothetical protein 2265 64.23 0 2529636..2529881 - 81 148261286 - Acry_2299 - hypothetical protein 2266 69.41 0 2530195..2530668 - 157 148261287 - Acry_2300 - hypothetical protein 2267 63.54 0 2530665..2532038 - 457 148261288 - Acry_2301 - hypothetical protein 2268 63.59 0 2532686..2533432 - 248 148261289 - Acry_2302 - IstB ATP binding domain-containing protein 2269 67.31 0 2533450..2534997 - 515 148261290 - Acry_2303 - integrase catalytic subunit 2270 66.46 0 2535115..2535591 - 158 148261291 - Acry_2304 - hypothetical protein 2271 63.91 0 2535591..2536025 - 144 148261292 - Acry_2305 - hypothetical protein 2272 56.33 -2 2536284..2536931 - 215 148261293 - Acry_2306 - hypothetical protein 2273 65.48 0 2537128..2537379 - 83 148261294 - Acry_2307 - hypothetical protein 2274 63.95 0 2537376..2537780 - 134 148261295 - Acry_2308 - hypothetical protein 2275 64.64 0 2538067..2539299 - 410 148261296 - Acry_2309 - phage integrase family protein 2276 66.91 0 2539799..2540605 + 268 148261297 - Acry_2310 - hypothetical protein 2277 64.72 0 2540505..2541326 - 273 148261298 - Acry_2311 - transposase 2278 66.92 0 2541879..2542673 - 264 148261299 - Acry_2313 - myo-inositol catabolism IolB domain-containing protein 2279 68.62 0 2542705..2544543 - 612 148261300 - Acry_2314 - thiamine pyrophosphate enzyme, central region 2280 66.35 0 2544540..2546450 - 636 148261301 - Acry_2315 - ribokinase-like domain-containing protein 2281 66.79 0 2546519..2547322 - 267 148261302 - Acry_2316 - ABC transporter related 2282 64.51 0 2547324..2548391 - 355 148261303 - Acry_2317 - inner-membrane translocator 2283 63.24 0 2548472..2549434 - 320 148261304 - Acry_2318 - ABC-type sugar transport system periplasmic component-like protein 2284 61.72 -1 2549599..2550387 - 262 148261305 - Acry_2319 - xylose isomerase domain-containing protein 2285 62.91 -1 2550396..2551406 - 336 148261306 - Acry_2320 - inositol 2-dehydrogenase 2286 60.85 -1 2551408..2552370 - 320 148261307 - Acry_2321 - xylose isomerase domain-containing protein 2287 61.45 -1 2552446..2553519 + 357 148261308 - Acry_2322 - regulatory protein, LacI 2288 58.00 -2 2553835..2553984 + 49 148261309 - Acry_2323 - hypothetical protein 2289 63.71 0 2554047..2554859 - 270 148261310 - Acry_2324 - short chain dehydrogenase 2290 63.71 0 2554856..2555767 - 303 148261311 - Acry_2325 - xylose isomerase domain-containing protein 2291 64.02 0 2555881..2556825 - 314 148261312 - Acry_2326 - RpiR family transcriptional regulator 2292 65.40 0 2557149..2557940 + 263 148261313 - Acry_2327 - HpcH/HpaI aldolase 2293 68.69 0 2557942..2558928 + 328 148261314 - Acry_2328 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 2294 68.28 0 2558999..2559991 + 330 148261315 - Acry_2329 - inositol 2-dehydrogenase 2295 67.29 0 2559996..2561117 + 373 148261316 - Acry_2330 - oxidoreductase domain-containing protein 2296 64.85 0 2561181..2561345 - 54 148261317 - Acry_2331 - hypothetical protein 2297 64.98 0 2561466..2563892 - 808 148261318 - Acry_2332 - hypothetical protein 2298 63.97 0 2563912..2565471 - 519 148261319 - Acry_2333 - NADH dehydrogenase (quinone) 2299 59.36 -1 2565579..2566454 + 291 148261320 - Acry_2334 - LysR family transcriptional regulator 2300 75.19 +1 2566986..2567243 + 85 148261321 - Acry_2335 - hypothetical protein 2301 73.43 +1 2567305..2567925 + 206 148261322 - Acry_2336 - RNA polymerase sigma factor 2302 78.55 +2 2567922..2568350 + 142 148261323 - Acry_2337 - hypothetical protein 2303 74.81 +1 2568347..2568886 + 179 148261324 - Acry_2338 - integral membrane protein-like protein 2304 73.10 0 2569303..2570871 + 522 148261325 - Acry_2339 - hypothetical protein 2305 74.55 +1 2570877..2572094 + 405 148261326 - Acry_2340 - hypothetical protein 68.17 MEAN 5.03 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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