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Acidiphilium cryptum JF-5, complete genome - 1..3389227 3063 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2154 67.82 0 2414989..2417160 - 723 148261175 - Acry_2185 - glycine--tRNA ligase 2155 65.56 0 2417153..2418058 - 301 148261176 glyQ Acry_2186 - glycyl-tRNA synthetase subunit alpha 2156 71.11 0 2418126..2418530 + 134 148261177 - Acry_2187 - hypothetical protein 2157 67.77 0 2418517..2419689 + 390 148261178 - Acry_2188 - acyl-CoA dehydrogenase domain-containing protein 2158 71.16 0 2419751..2420707 + 318 148261179 - Acry_2189 - acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2159 71.18 0 2420804..2421424 + 206 148261180 - Acry_2190 - hypothetical protein 2160 66.78 0 2421470..2422333 - 287 148261181 - Acry_2191 - spermidine synthase 2161 64.73 0 2422403..2422867 - 154 148261182 - Acry_2192 - S-adenosylmethionine decarboxylase related 2162 72.99 0 2423034..2423792 - 252 148261183 - Acry_2193 - hypothetical protein 2163 73.95 +1 2423851..2424990 + 379 148261184 - Acry_2194 - glycosyl transferase, group 1 2164 76.04 +1 2424987..2425925 + 312 148261185 - Acry_2195 - glycosyl transferase family protein 2165 68.49 0 2425937..2427859 + 640 148261186 - Acry_2196 - threonyl-tRNA synthetase 2166 61.06 -1 2428135..2428776 + 213 148261187 - Acry_2197 - hypothetical protein 2167 77.04 +1 2428944..2429531 + 195 148261188 - Acry_2198 - hypothetical protein 2168 72.51 0 2429554..2430375 - 273 148261189 - Acry_2199 - beta-ketoadipate pathway transcription regulator 2169 69.14 0 2430570..2431055 - 161 148261190 - Acry_2200 - OsmC family protein 2170 69.52 0 2431094..2431795 - 233 148261191 - Acry_2201 - ABC transporter related 2171 67.94 0 2431800..2432507 - 235 148261192 - Acry_2202 - ABC transporter related 2172 66.12 0 2432497..2433405 - 302 148261193 - Acry_2203 - inner-membrane translocator 2173 64.63 0 2433419..2434300 - 293 148261194 - Acry_2204 - inner-membrane translocator 2174 64.12 0 2434402..2435658 - 418 148261195 - Acry_2205 - extracellular ligand-binding receptor 2175 61.65 -1 2435779..2436795 - 338 148261196 - Acry_2206 - hypothetical protein 2176 64.42 0 2436881..2437147 + 88 148261197 - Acry_2207 - hypothetical protein 2177 73.51 +1 2437362..2439671 + 769 148261198 - Acry_2208 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2178 74.28 +1 2439791..2440972 + 393 148261199 - Acry_2209 - hypothetical protein 2179 69.73 0 2441086..2442816 + 576 148261200 - Acry_2210 - dihydroxy-acid dehydratase 2180 71.63 0 2442923..2445298 + 791 148261201 - Acry_2211 - carbon-monoxide dehydrogenase (acceptor) 2181 71.91 0 2445358..2446101 - 247 148261202 - Acry_2212 - glycosyl transferase family protein 2182 70.72 0 2446312..2447298 - 328 148261203 - Acry_2213 - monosaccharide-transporting ATPase 2183 70.83 0 2447295..2448278 - 327 148261204 - Acry_2214 - monosaccharide-transporting ATPase 2184 71.90 0 2448275..2449804 - 509 148261205 - Acry_2215 - ABC transporter related 2185 61.56 -1 2449820..2450857 - 345 148261206 - Acry_2216 - periplasmic binding protein/LacI transcriptional regulator 2186 62.94 -1 2451299..2451700 - 133 148261207 - Acry_2217 - DNA replication protein-like protein 2187 66.17 0 2451894..2452499 - 201 148261208 - Acry_2218 - PadR-like family transcriptional regulator 2188 65.46 0 2452764..2453012 - 82 148261209 - Acry_2219 - CopG/Arc/MetJ family transcriptional regulator 2189 62.85 -1 2453275..2453562 + 95 148261210 - Acry_2220 - hypothetical protein 2190 54.93 -2 2454391..2455080 - 229 148261211 - Acry_2222 - hypothetical protein 2191 47.49 -2 2455386..2455922 - 178 148261212 - Acry_2223 - hypothetical protein 2192 63.61 0 2456273..2456566 - 97 148261213 - Acry_2225 - hypothetical protein 2193 56.38 -2 2456767..2457048 - 93 148261214 - Acry_2226 - hypothetical protein 2194 63.85 0 2457060..2458406 + 448 148261215 - Acry_2227 - transposase, IS4 family protein 2195 63.64 0 2458551..2459771 - 406 148261216 - Acry_2228 - peptidase dimerisation domain-containing protein 2196 63.64 0 2459773..2460960 - 395 148261217 - Acry_2229 - amidohydrolase 2197 58.60 -1 2461609..2462079 - 156 148261218 - Acry_2230 - hypothetical protein 2198 62.49 -1 2462369..2463277 - 302 148261219 - Acry_2231 - LysR family transcriptional regulator 2199 61.15 -1 2463377..2464138 + 253 148261220 - Acry_2232 - short-chain dehydrogenase/reductase SDR 2200 56.34 -2 2464288..2464965 + 225 148261221 - Acry_2233 - Asp/Glu racemase 2201 62.68 -1 2465204..2466130 + 308 148261222 - Acry_2234 - threonine dehydratase 2202 70.72 0 2467182..2468168 - 328 148261223 - Acry_2236 - monosaccharide-transporting ATPase 2203 70.83 0 2468165..2469148 - 327 148261224 - Acry_2237 - monosaccharide-transporting ATPase 2204 71.88 0 2469145..2470659 - 504 148261225 - Acry_2238 - ABC transporter related 2205 64.63 0 2470665..2471696 - 343 148261226 - Acry_2239 - periplasmic binding protein/LacI transcriptional regulator 2206 70.22 0 2471963..2472751 + 262 148261227 - Acry_2240 - regulatory protein, IclR 2207 68.93 0 2473227..2475167 + 646 148261228 - Acry_2241 - peptidoglycan glycosyltransferase 2208 71.59 0 2475225..2475914 + 229 148261229 - Acry_2242 - GntR family transcriptional regulator 2209 62.59 -1 2476217..2476780 - 187 148261230 - Acry_2243 - beta-Ig-H3/fasciclin 2210 71.71 0 2476936..2478165 - 409 148261231 argJ Acry_2244 - bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 2211 66.24 0 2478176..2479111 - 311 148261232 - Acry_2245 - PpiC-type peptidyl-prolyl cis-trans isomerase 2212 64.96 0 2479294..2482113 + 939 148261233 secA Acry_2246 - preprotein translocase subunit SecA 2213 66.10 0 2482118..2482648 + 176 148261234 - Acry_2247 - hypothetical protein 2214 64.73 0 2482744..2483208 - 154 148261235 - Acry_2248 - transcriptional regulator, TrmB 2215 68.70 0 2483365..2483856 - 163 148261236 rpsI Acry_2249 - 30S ribosomal protein S9 2216 62.05 -1 2483859..2484335 - 158 148261237 rplM Acry_2250 - 50S ribosomal protein L13 2217 73.53 +1 2484427..2485359 - 310 148261238 - Acry_2251 - NAD-dependent epimerase/dehydratase 2218 63.64 0 2485385..2485978 - 197 148261239 - Acry_2252 - polyhydroxyalkonate synthesis repressor, PhaR 2219 70.69 0 2486088..2486858 - 256 148261240 - Acry_2253 - hypothetical protein 2220 70.68 0 2486931..2487329 + 132 148261241 - Acry_2254 - hypothetical protein 2221 72.29 0 2487343..2488338 + 331 148261242 - Acry_2255 - alpha/beta hydrolase fold 2222 69.99 0 2488395..2489567 + 390 148261243 - Acry_2256 - acetyl-CoA acetyltransferase 2223 65.95 0 2489592..2490293 + 233 148261244 - Acry_2257 - 3-oxoacid CoA-transferase, A subunit 2224 64.32 0 2490304..2490984 + 226 148261245 - Acry_2258 - 3-oxoacid CoA-transferase, B subunit 2225 68.70 0 2490981..2492261 + 426 148261246 - Acry_2259 - 4-aminobutyrate aminotransferase 2226 70.60 0 2492268..2494301 - 677 148261247 - Acry_2260 - hypothetical protein 2227 68.22 0 2494355..2494741 - 128 148261248 - Acry_2261 - hypothetical protein 2228 62.70 -1 2494956..2495837 + 293 148261249 - Acry_2262 - helix-turn-helix domain-containing protein 2229 67.95 0 2495890..2496744 + 284 148261250 - Acry_2263 - rhodanese domain-containing protein 2230 68.50 0 2496741..2497997 + 418 148261251 - Acry_2264 - cystathionine beta-lyase 2231 65.81 0 2497994..2498344 + 116 148261252 - Acry_2265 - phosphoribosyl-AMP cyclohydrolase 2232 63.71 0 2498489..2498860 - 123 148261253 - Acry_2266 - iron-sulfur cluster assembly accessory protein 2233 66.94 0 2498871..2499236 - 121 148261254 - Acry_2267 - hypothetical protein 2234 72.59 0 2499226..2499681 - 151 148261255 - Acry_2268 - NifU family SUF system FeS assembly protein 2235 69.08 0 2499678..2500922 - 414 148261256 - Acry_2269 - SufS subfamily cysteine desulfurase 2236 72.58 0 2500919..2502118 - 399 148261257 - Acry_2270 - FeS assembly protein SufD 2237 66.53 0 2502115..2502858 - 247 148261258 - Acry_2271 - FeS assembly ATPase SufC 2238 63.71 0 2502868..2504319 - 483 148261259 - Acry_2272 - cysteine desulfurase activator complex subunit SufB 2239 68.37 0 2504499..2504792 - 97 148261260 - Acry_2273 - BadM/Rrf2 family transcriptional regulator 2240 68.82 0 2504917..2505567 - 216 148261261 - Acry_2274 - phosphoglycolate phosphatase 2241 72.37 0 2505640..2506953 + 437 148261262 - Acry_2275 - nucleotidyl transferase 2242 67.98 0 2506953..2508776 + 607 148261263 - Acry_2276 - D-fructose-6-phosphate amidotransferase 2243 61.60 -1 2508851..2509501 - 216 148261264 - Acry_2277 - hypothetical protein 2244 70.30 0 2509554..2509718 + 54 148261265 - Acry_2278 - hypothetical protein 2245 62.67 -1 2509890..2510189 - 99 148261266 - Acry_2279 - hypothetical protein 2246 78.12 +1 2510365..2510853 - 162 148261267 - Acry_2280 - bacteriochlorophyll 4-vinyl reductase 2247 65.58 0 2510964..2512526 - 520 148261268 - Acry_2281 - magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase 2248 66.99 0 2512789..2513097 - 102 148261269 - Acry_2282 - hypothetical protein 2249 60.56 -1 2513175..2513567 + 130 148261270 - Acry_2283 - hypothetical protein 2250 67.35 0 2513607..2514044 + 145 148261271 - Acry_2284 - hypothetical protein 2251 67.86 0 2514351..2515106 - 251 148261272 - Acry_2285 - HpcH/HpaI aldolase 2252 67.69 0 2515183..2515863 + 226 148261273 - Acry_2286 - pyrrolidone-carboxylate peptidase 2253 65.71 0 2516160..2516996 - 278 148261274 - Acry_2287 - alpha/beta hydrolase fold 68.17 MEAN 5.03 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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