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Acidiphilium cryptum JF-5, complete genome - 1..3389227 3063 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1804 59.20 -1 2020749..2021900 - 383 148260825 - Acry_1831 - radical SAM domain-containing protein 1805 62.50 -1 2021940..2022923 - 327 148260826 - Acry_1832 - hydroxymethylbutenyl pyrophosphate reductase 1806 67.49 0 2023304..2025247 + 647 148260827 - Acry_1833 - 1-deoxy-D-xylulose-5-phosphate synthase 1807 62.04 -1 2025244..2025891 + 215 148260828 - Acry_1834 - toluene tolerance family protein 1808 69.26 0 2025893..2027086 + 397 148260829 - Acry_1835 - cell wall biosynthesis glycosyltransferase-like protein 1809 64.28 0 2027097..2028521 + 474 148260830 - Acry_1836 - radical SAM domain-containing protein 1810 68.03 0 2028543..2029346 + 267 148260831 - Acry_1837 - YdjC family protein 1811 59.15 -1 2029506..2031167 + 553 148260832 - Acry_1838 - hypothetical protein 1812 65.77 0 2031312..2031758 - 148 148260833 - Acry_1839 - hypothetical protein 1813 61.86 -1 2031755..2032087 - 110 148260834 - Acry_1840 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1814 68.31 0 2032161..2032889 - 242 148260835 - Acry_1841 - hypothetical protein 1815 65.00 0 2032873..2033292 - 139 148260836 - Acry_1842 - hypothetical protein 1816 64.76 0 2033386..2033805 + 139 148260837 - Acry_1843 - BadM/Rrf2 family transcriptional regulator 1817 70.20 0 2033926..2035650 - 574 148260838 - Acry_1844 - DEAD/DEAH box helicase domain-containing protein 1818 71.99 0 2035778..2036434 - 218 148260839 - Acry_1845 - 3-oxoacid CoA-transferase, B subunit 1819 71.18 0 2036434..2037120 - 228 148260840 - Acry_1846 - 3-oxoacid CoA-transferase, A subunit 1820 73.23 +1 2037125..2038327 - 400 148260841 - Acry_1847 - beta-ketoadipyl CoA thiolase 1821 73.06 0 2038348..2038863 - 171 148260842 - Acry_1848 - protocatechuate 3,4-dioxygenase, alpha subunit 1822 71.06 0 2038873..2039577 - 234 148260843 - Acry_1849 - protocatechuate 3,4-dioxygenase, beta subunit 1823 70.36 0 2039574..2040764 - 396 148260844 - Acry_1850 - 4-hydroxybenzoate 3-monooxygenase 1824 69.04 0 2041073..2043259 + 728 148260845 - Acry_1851 - catalase/peroxidase HPI 1825 67.07 0 2043310..2044302 - 330 148260846 - Acry_1852 - monosaccharide-transporting ATPase 1826 65.69 0 2044319..2045338 - 339 148260847 - Acry_1853 - periplasmic binding protein/LacI transcriptional regulator 1827 66.67 0 2045335..2046114 - 259 148260848 - Acry_1854 - ABC transporter related 1828 72.11 0 2046397..2047149 + 250 148260849 - Acry_1855 - short chain dehydrogenase 1829 74.36 +1 2047149..2047967 + 272 148260850 - Acry_1856 - amidohydrolase 2 1830 75.95 +1 2048079..2048972 - 297 148260851 - Acry_1857 - ribokinase-like domain-containing protein 1831 72.93 0 2048972..2050153 - 393 148260852 - Acry_1858 - mannonate dehydratase 1832 74.95 +1 2050174..2051586 - 470 148260853 - Acry_1859 - mannitol dehydrogenase domain-containing protein 1833 70.93 0 2051564..2052337 - 257 148260854 - Acry_1860 - short-chain dehydrogenase/reductase SDR 1834 70.57 0 2052475..2053269 + 264 148260855 - Acry_1861 - GntR family transcriptional regulator 1835 69.08 0 2053266..2054882 + 538 148260856 - Acry_1862 - galactarate dehydratase 1836 68.20 0 2054966..2055682 - 238 148260857 - Acry_1863 - ABC transporter related 1837 64.67 0 2055675..2057474 - 599 148260858 - Acry_1864 - ABC transporter related 1838 63.50 0 2057508..2058392 - 294 148260859 - Acry_1865 - inner-membrane translocator 1839 62.57 -1 2058486..2059607 - 373 148260860 - Acry_1866 - extracellular ligand-binding receptor 1840 72.02 0 2059881..2060552 - 223 148260861 - Acry_1867 - dethiobiotin synthase 1841 72.43 0 2060549..2061694 - 381 148260862 - Acry_1868 - 8-amino-7-oxononanoate synthase 1842 68.51 0 2061782..2062759 + 325 148260863 - Acry_1869 - biotin synthase 1843 69.37 0 2062756..2064012 + 418 148260864 - Acry_1870 - adenosylmethionine--8-amino-7-oxononanoate transaminase 1844 77.14 +1 2064033..2064605 - 190 148260865 - Acry_1871 - hypothetical protein 1845 73.56 +1 2064736..2065431 - 231 148260866 - Acry_1872 - hypothetical protein 1846 70.97 0 2065607..2066419 - 270 148260867 - Acry_1873 - hypothetical protein 1847 74.11 +1 2066696..2067313 - 205 148260868 - Acry_1874 - cytochrome B561 1848 71.17 0 2067395..2068771 - 458 148260869 - Acry_1875 - glutamate--cysteine ligase 1849 75.17 +1 2068787..2069503 - 238 148260870 - Acry_1876 - hypothetical protein 1850 73.52 +1 2069559..2070419 + 286 148260871 - Acry_1877 - 4-hydroxybenzoate polyprenyl transferase 1851 72.71 0 2070416..2071060 + 214 148260872 - Acry_1878 - methyltransferase-like protein 1852 68.98 0 2071151..2071582 + 143 148260873 - Acry_1879 - succinate dehydrogenase, cytochrome b subunit 1853 67.72 0 2071606..2071983 + 125 148260874 - Acry_1880 - succinate dehydrogenase, cytochrome b subunit 1854 68.93 0 2072009..2073820 + 603 148260875 sdhA Acry_1881 - succinate dehydrogenase flavoprotein subunit 1855 65.52 0 2073837..2074619 + 260 148260876 sdhB Acry_1882 - succinate dehydrogenase iron-sulfur subunit 1856 72.79 0 2075234..2076883 - 549 148260877 - Acry_1883 - integral membrane sensor signal transduction histidine kinase 1857 67.52 0 2076880..2077581 - 233 148260878 - Acry_1884 - two component transcriptional regulator 1858 70.11 0 2078438..2080093 + 551 148260879 - Acry_1886 - phosphoenolpyruvate carboxykinase 1859 73.68 +1 2080608..2081777 + 389 148260880 - Acry_1887 - amidohydrolase 1860 71.45 0 2081774..2082463 + 229 148260881 - Acry_1888 - multiple antibiotic resistance (MarC)-related protein 1861 73.04 0 2082578..2083126 + 182 148260882 - Acry_1889 - MarR family transcriptional regulator 1862 67.75 0 2083126..2084232 + 368 148260883 - Acry_1890 - secretion protein HlyD family protein 1863 66.92 0 2084260..2085834 + 524 148260884 - Acry_1891 - EmrB/QacA family drug resistance transporter 1864 69.00 0 2085877..2086518 - 213 148260885 - Acry_1892 - uracil phosphoribosyltransferase 1865 71.01 0 2086543..2087925 - 460 148260886 - Acry_1893 - glycosyl transferase, group 1 1866 77.54 +1 2087939..2088913 - 324 148260887 - Acry_1894 - hypothetical protein 1867 78.51 +2 2088916..2091777 - 953 148260888 - Acry_1895 - glycosyl transferase family protein 1868 76.18 +1 2091722..2093497 - 591 148260889 - Acry_1896 - Sel1 domain-containing protein 1869 69.74 0 2093516..2094946 - 476 148260890 - Acry_1897 - HlyD family type I secretion membrane fusion protein 1870 68.64 0 2094912..2097140 - 742 148260891 - Acry_1898 - ABC transporter related 1871 69.64 0 2097397..2097900 + 167 148260892 - Acry_1899 - GCN5-related N-acetyltransferase 1872 66.20 0 2097907..2098767 - 286 148260893 - Acry_1900 - flagellar motor protein MotA 1873 70.34 0 2098816..2099931 - 371 148260894 - Acry_1901 - OmpA/MotB domain-containing protein 1874 75.91 +1 2100000..2100983 - 327 148260895 - Acry_1902 - pyridoxal-5'-phosphate-dependent enzyme, beta subunit 1875 75.61 +1 2100980..2102410 - 476 148260896 - Acry_1903 - glycosyl transferase family protein 1876 72.05 0 2102514..2103608 - 364 148260897 - Acry_1904 - dolichyl-phosphate beta-D-mannosyltransferase 1877 70.16 0 2103619..2104104 - 161 148260898 - Acry_1905 - redoxin domain-containing protein 1878 68.55 0 2104180..2104869 - 229 148260899 - Acry_1906 - oxidoreductase, molybdopterin binding 1879 67.92 0 2104939..2105418 - 159 148260900 smpB Acry_1907 - SsrA-binding protein 1880 69.74 0 2105418..2106296 - 292 148260901 - Acry_1908 - dihydrodipicolinate synthase 1881 75.47 +1 2106388..2108421 + 677 148260902 - Acry_1909 - lytic transglycosylase, catalytic 1882 73.29 +1 2108403..2108885 + 160 148260903 - Acry_1910 - phosphatidylglycerophosphatase A 1883 77.85 +1 2108882..2109355 + 157 148260904 - Acry_1911 - CinA domain-containing protein 1884 71.53 0 2109539..2111203 + 554 148260905 - Acry_1912 - diguanylate phosphodiesterase 1885 73.88 +1 2111232..2111744 - 170 148260906 - Acry_1913 - chromate transporter 1886 73.11 0 2111741..2112826 - 361 148260907 - Acry_1914 - chromate transporter 1887 65.46 0 2112990..2114069 + 359 148260908 - Acry_1915 - phosphate ABC transporter, periplasmic phosphate-binding protein 1888 65.23 0 2114151..2115125 + 324 148260909 - Acry_1916 - phosphate ABC transporter, inner membrane subunit PstC 1889 67.93 0 2115109..2115978 + 289 148260910 - Acry_1917 - phosphate ABC transporter, inner membrane subunit PstA 1890 75.47 +1 2115979..2116455 - 158 148260911 - Acry_1918 - YbaK/prolyl-tRNA synthetase associated region 1891 69.67 0 2116452..2116850 - 132 148260912 - Acry_1919 - hypothetical protein 1892 70.45 0 2116922..2118586 - 554 148260913 - Acry_1920 - M3 family oligoendopeptidase 1893 69.84 0 2118693..2119133 - 146 148260914 - Acry_1921 - ribosomal protein L17 1894 65.90 0 2119184..2120221 - 345 148260915 - Acry_1922 - DNA-directed RNA polymerase subunit alpha 1895 68.45 0 2120338..2120730 - 130 148260916 - Acry_1923 - 30S ribosomal protein S11 1896 63.76 0 2120809..2121186 - 125 148260917 rpsM Acry_1924 - 30S ribosomal protein S13 1897 67.11 0 2121387..2122061 - 224 148260918 - Acry_1925 - adenylate kinase 1898 62.59 -1 2122058..2123407 - 449 148260919 - Acry_1926 - preprotein translocase, SecY subunit 1899 69.55 0 2123545..2124030 - 161 148260920 - Acry_1927 - ribosomal protein L15 1900 65.64 0 2124030..2124224 - 64 148260921 - Acry_1928 - ribosomal protein L30 1901 71.05 0 2124217..2124786 - 189 148260922 rpsE Acry_1929 - 30S ribosomal protein S5 1902 70.80 0 2124797..2125159 - 120 148260923 - Acry_1930 - ribosomal protein L18 1903 63.86 0 2125159..2125692 - 177 148260924 rplF Acry_1931 - 50S ribosomal protein L6 68.17 MEAN 5.03 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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