version 1.0
Acidiphilium cryptum JF-5, complete genome - 1..3389227 3063 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1755 68.66 0 1961064..1962617 + 517 148260776 - Acry_1781 - TolC family type I secretion outer membrane protein 1756 71.51 0 1962614..1963171 + 185 148260777 - Acry_1782 - hypothetical protein 1757 69.84 0 1963330..1966005 + 891 148260778 valS Acry_1783 - valyl-tRNA synthetase 1758 66.43 0 1966078..1966908 + 276 148260779 - Acry_1784 - band 7 protein 1759 73.66 +1 1967004..1968332 - 442 148260780 - Acry_1785 - peptidase U62, modulator of DNA gyrase 1760 67.61 0 1968329..1969594 - 421 148260781 - Acry_1786 - processing peptidase 1761 70.58 0 1969591..1970994 - 467 148260782 - Acry_1787 - threonine synthase 1762 67.27 0 1971057..1971557 - 166 148260783 - Acry_1788 - preprotein translocase subunit SecB 1763 71.82 0 1971641..1972591 + 316 148260784 - Acry_1789 - N-acetyl-gamma-glutamyl-phosphate reductase 1764 69.40 0 1972647..1973195 + 182 148260785 - Acry_1790 - 2'-5' RNA ligase 1765 68.70 0 1973308..1974834 - 508 148260786 - Acry_1791 - methylmalonate-semialdehyde dehydrogenase 1766 70.16 0 1974920..1975807 + 295 148260787 - Acry_1792 - LysR family transcriptional regulator 1767 67.68 0 1975868..1976359 - 163 148260788 - Acry_1793 - hypothetical protein 1768 71.32 0 1976383..1977435 + 350 148260789 - Acry_1794 - secretion protein HlyD family protein 1769 72.60 0 1977422..1979158 + 578 148260790 - Acry_1795 - ABC transporter related 1770 69.69 0 1979155..1980279 + 374 148260791 - Acry_1796 - ABC-2 type transporter 1771 68.20 0 1980285..1981391 + 368 148260792 - Acry_1797 - ABC-2 type transporter 1772 68.94 0 1981545..1983218 + 557 148260793 - Acry_1798 - hydroxylamine reductase 1773 69.73 0 1983295..1984305 + 336 148260794 - Acry_1799 - oxidoreductase FAD-binding subunit 1774 67.11 0 1984337..1984789 + 150 148260795 - Acry_1800 - BadM/Rrf2 family transcriptional regulator 1775 68.61 0 1984945..1986075 - 376 148260796 - Acry_1801 - cellulose biosynthesis protein CelD 1776 66.57 0 1986113..1987153 + 346 148260797 - Acry_1802 - hypothetical protein 1777 71.22 0 1987153..1988382 + 409 148260798 - Acry_1803 - glycosyl transferase, group 1 1778 72.05 0 1988400..1989440 + 346 148260799 - Acry_1804 - hypothetical protein 1779 72.74 0 1989437..1990555 + 372 148260800 - Acry_1805 - glycosyl transferase, group 1 1780 68.33 0 1990552..1990971 + 139 148260801 - Acry_1806 - hypothetical protein 1781 61.47 -1 1991304..1992266 - 320 148260802 - Acry_1808 - CRISPR-associated Cas1 family protein 1782 63.46 0 1992259..1992945 - 228 148260803 - Acry_1809 - CRISPR-associated Cse3 family protein 1783 65.20 0 1992942..1993691 - 249 148260804 - Acry_1810 - CRISPR-associated Cas5 family protein 1784 63.43 0 1993693..1994805 - 370 148260805 - Acry_1811 - CRISPR-associated Cse4 family protein 1785 65.56 0 1994805..1995344 - 179 148260806 - Acry_1812 - hypothetical protein 1786 61.01 -1 1995341..1996930 - 529 148260807 - Acry_1813 - CRISPR-associated Cse1 family protein 1787 63.11 -1 1997220..1999325 - 701 148260808 - Acry_1814 - CRISPR-associated helicase Cas3 1788 58.58 -1 2000148..2000456 - 102 148260809 - Acry_1815 - hypothetical protein 1789 62.61 -1 2000602..2002374 - 590 148260810 - Acry_1816 - ATPase central domain-containing protein 1790 60.22 -1 2002595..2003308 - 237 148260811 - Acry_1817 - hypothetical protein 1791 51.75 -2 2003548..2003775 + 75 148260812 - Acry_1818 - hypothetical protein 1792 52.06 -2 2003885..2004370 - 161 148260813 - Acry_1819 - hypothetical protein 1793 49.07 -2 2004619..2004942 - 107 148260814 - Acry_1820 - hypothetical protein 1794 57.49 -2 2005182..2005508 - 108 148260815 - Acry_1821 - NIPSNAP family protein 1795 64.53 0 2005755..2007485 + 576 148260816 - Acry_1822 - resolvase domain-containing protein 1796 66.28 0 2013473..2016055 - 860 148260817 - Acry_1823 - ATPase 1797 69.03 0 2016173..2016934 + 253 148260818 - Acry_1824 - MOSC domain-containing protein 1798 67.35 0 2016985..2017569 + 194 148260819 - Acry_1825 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1799 67.78 0 2017577..2018116 + 179 148260820 - Acry_1826 - molybdopterin-guanine dinucleotide biosynthesis protein B 1800 69.65 0 2018170..2018940 + 256 148260821 - Acry_1827 - hypothetical protein 1801 60.71 -1 2018972..2019223 + 83 148260822 - Acry_1828 - molybdopterin converting factor, subunit 1 1802 67.76 0 2019220..2019678 + 152 148260823 - Acry_1829 - molybdopterin biosynthesis MoaE protein 1803 53.78 -2 2019963..2020715 + 250 148260824 - Acry_1830 - two component transcriptional regulator 1804 59.20 -1 2020749..2021900 - 383 148260825 - Acry_1831 - radical SAM domain-containing protein 1805 62.50 -1 2021940..2022923 - 327 148260826 - Acry_1832 - hydroxymethylbutenyl pyrophosphate reductase 1806 67.49 0 2023304..2025247 + 647 148260827 - Acry_1833 - 1-deoxy-D-xylulose-5-phosphate synthase 1807 62.04 -1 2025244..2025891 + 215 148260828 - Acry_1834 - toluene tolerance family protein 1808 69.26 0 2025893..2027086 + 397 148260829 - Acry_1835 - cell wall biosynthesis glycosyltransferase-like protein 1809 64.28 0 2027097..2028521 + 474 148260830 - Acry_1836 - radical SAM domain-containing protein 1810 68.03 0 2028543..2029346 + 267 148260831 - Acry_1837 - YdjC family protein 1811 59.15 -1 2029506..2031167 + 553 148260832 - Acry_1838 - hypothetical protein 1812 65.77 0 2031312..2031758 - 148 148260833 - Acry_1839 - hypothetical protein 1813 61.86 -1 2031755..2032087 - 110 148260834 - Acry_1840 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1814 68.31 0 2032161..2032889 - 242 148260835 - Acry_1841 - hypothetical protein 1815 65.00 0 2032873..2033292 - 139 148260836 - Acry_1842 - hypothetical protein 1816 64.76 0 2033386..2033805 + 139 148260837 - Acry_1843 - BadM/Rrf2 family transcriptional regulator 1817 70.20 0 2033926..2035650 - 574 148260838 - Acry_1844 - DEAD/DEAH box helicase domain-containing protein 1818 71.99 0 2035778..2036434 - 218 148260839 - Acry_1845 - 3-oxoacid CoA-transferase, B subunit 1819 71.18 0 2036434..2037120 - 228 148260840 - Acry_1846 - 3-oxoacid CoA-transferase, A subunit 1820 73.23 +1 2037125..2038327 - 400 148260841 - Acry_1847 - beta-ketoadipyl CoA thiolase 1821 73.06 0 2038348..2038863 - 171 148260842 - Acry_1848 - protocatechuate 3,4-dioxygenase, alpha subunit 1822 71.06 0 2038873..2039577 - 234 148260843 - Acry_1849 - protocatechuate 3,4-dioxygenase, beta subunit 1823 70.36 0 2039574..2040764 - 396 148260844 - Acry_1850 - 4-hydroxybenzoate 3-monooxygenase 1824 69.04 0 2041073..2043259 + 728 148260845 - Acry_1851 - catalase/peroxidase HPI 1825 67.07 0 2043310..2044302 - 330 148260846 - Acry_1852 - monosaccharide-transporting ATPase 1826 65.69 0 2044319..2045338 - 339 148260847 - Acry_1853 - periplasmic binding protein/LacI transcriptional regulator 1827 66.67 0 2045335..2046114 - 259 148260848 - Acry_1854 - ABC transporter related 1828 72.11 0 2046397..2047149 + 250 148260849 - Acry_1855 - short chain dehydrogenase 1829 74.36 +1 2047149..2047967 + 272 148260850 - Acry_1856 - amidohydrolase 2 1830 75.95 +1 2048079..2048972 - 297 148260851 - Acry_1857 - ribokinase-like domain-containing protein 1831 72.93 0 2048972..2050153 - 393 148260852 - Acry_1858 - mannonate dehydratase 1832 74.95 +1 2050174..2051586 - 470 148260853 - Acry_1859 - mannitol dehydrogenase domain-containing protein 1833 70.93 0 2051564..2052337 - 257 148260854 - Acry_1860 - short-chain dehydrogenase/reductase SDR 1834 70.57 0 2052475..2053269 + 264 148260855 - Acry_1861 - GntR family transcriptional regulator 1835 69.08 0 2053266..2054882 + 538 148260856 - Acry_1862 - galactarate dehydratase 1836 68.20 0 2054966..2055682 - 238 148260857 - Acry_1863 - ABC transporter related 1837 64.67 0 2055675..2057474 - 599 148260858 - Acry_1864 - ABC transporter related 1838 63.50 0 2057508..2058392 - 294 148260859 - Acry_1865 - inner-membrane translocator 1839 62.57 -1 2058486..2059607 - 373 148260860 - Acry_1866 - extracellular ligand-binding receptor 1840 72.02 0 2059881..2060552 - 223 148260861 - Acry_1867 - dethiobiotin synthase 1841 72.43 0 2060549..2061694 - 381 148260862 - Acry_1868 - 8-amino-7-oxononanoate synthase 1842 68.51 0 2061782..2062759 + 325 148260863 - Acry_1869 - biotin synthase 1843 69.37 0 2062756..2064012 + 418 148260864 - Acry_1870 - adenosylmethionine--8-amino-7-oxononanoate transaminase 1844 77.14 +1 2064033..2064605 - 190 148260865 - Acry_1871 - hypothetical protein 1845 73.56 +1 2064736..2065431 - 231 148260866 - Acry_1872 - hypothetical protein 1846 70.97 0 2065607..2066419 - 270 148260867 - Acry_1873 - hypothetical protein 1847 74.11 +1 2066696..2067313 - 205 148260868 - Acry_1874 - cytochrome B561 1848 71.17 0 2067395..2068771 - 458 148260869 - Acry_1875 - glutamate--cysteine ligase 1849 75.17 +1 2068787..2069503 - 238 148260870 - Acry_1876 - hypothetical protein 1850 73.52 +1 2069559..2070419 + 286 148260871 - Acry_1877 - 4-hydroxybenzoate polyprenyl transferase 1851 72.71 0 2070416..2071060 + 214 148260872 - Acry_1878 - methyltransferase-like protein 1852 68.98 0 2071151..2071582 + 143 148260873 - Acry_1879 - succinate dehydrogenase, cytochrome b subunit 1853 67.72 0 2071606..2071983 + 125 148260874 - Acry_1880 - succinate dehydrogenase, cytochrome b subunit 1854 68.93 0 2072009..2073820 + 603 148260875 sdhA Acry_1881 - succinate dehydrogenase flavoprotein subunit 68.17 MEAN 5.03 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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