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Acidiphilium cryptum JF-5, complete genome - 1..3389227 3063 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1695 69.30 0 1902116..1902457 + 113 148260716 - Acry_1720 - integration host factor, beta subunit 1696 75.32 +1 1902775..1903479 + 234 148260717 - Acry_1721 - orotidine 5'-phosphate decarboxylase 1697 73.62 +1 1903479..1904096 + 205 148260718 - Acry_1722 - phosphoribosylanthranilate isomerase 1698 71.50 0 1904125..1904952 - 275 148260719 - Acry_1723 - formamidopyrimidine-DNA glycosylase 1699 69.33 0 1904981..1905730 + 249 148260720 - Acry_1724 - ubiquinone/menaquinone biosynthesis methyltransferase 1700 72.33 0 1905727..1906926 + 399 148260721 - Acry_1725 - phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 1701 70.75 0 1906923..1907387 + 154 148260722 - Acry_1726 - deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 1702 72.06 0 1907384..1908181 - 265 148260723 - Acry_1727 - short-chain dehydrogenase/reductase SDR 1703 70.30 0 1908178..1909719 - 513 148260724 - Acry_1728 - deoxyribodipyrimidine photolyase-related protein 1704 69.80 0 1909719..1910357 - 212 148260725 - Acry_1729 - hypothetical protein 1705 72.83 0 1910525..1911043 + 172 148260726 - Acry_1730 - putative phosphohistidine phosphatase, SixA 1706 65.61 0 1911187..1912506 + 439 148260727 - Acry_1731 - citrate synthase I 1707 67.82 0 1912609..1912956 + 115 148260728 - Acry_1732 - regulatory protein, ArsR 1708 70.60 0 1912987..1914054 + 355 148260729 - Acry_1733 - NADH:flavin oxidoreductase/NADH oxidase 1709 70.70 0 1914116..1914859 + 247 148260730 - Acry_1734 - short-chain dehydrogenase/reductase SDR 1710 64.10 0 1914974..1915714 - 246 148260731 - Acry_1735 - hypothetical protein 1711 62.35 -1 1915878..1916132 + 84 148260732 - Acry_1736 - hypothetical protein 1712 70.94 0 1916129..1916830 + 233 148260733 - Acry_1737 - hypothetical protein 1713 70.15 0 1916846..1917649 - 267 148260734 - Acry_1738 - response regulator receiver protein 1714 69.61 0 1917922..1918362 - 146 148260735 - Acry_1739 - cytochrome c, class I 1715 73.64 +1 1918415..1919203 - 262 148260736 - Acry_1740 - hypothetical protein 1716 65.79 0 1919196..1920908 - 570 148260737 - Acry_1741 - Pyrrolo-quinoline quinone 1717 68.32 0 1920971..1921333 - 120 148260738 - Acry_1742 - hypothetical protein 1718 68.04 0 1921363..1922895 - 510 148260739 - Acry_1743 - aldehyde dehydrogenase 1719 74.89 +1 1923192..1925150 + 652 148260740 - Acry_1744 - Fis family GAF modulated sigma54 specific transcriptional regulator 1720 74.76 +1 1925167..1926537 - 456 148260741 - Acry_1745 - N-formimino-L-glutamate deiminase 1721 73.88 +1 1926620..1927825 + 401 148260742 - Acry_1746 - imidazolonepropionase 1722 73.48 +1 1927822..1929348 + 508 148260743 - Acry_1747 - histidine ammonia-lyase 1723 68.82 0 1929345..1930178 + 277 148260744 - Acry_1748 - N-formylglutamate amidohydrolase 1724 70.14 0 1930184..1931854 + 556 148260745 - Acry_1749 - urocanate hydratase 1725 73.99 +1 1931858..1932622 - 254 148260746 - Acry_1750 - GntR family transcriptional regulator 1726 75.50 +1 1932625..1933518 - 297 148260747 - Acry_1751 - N-formylglutamate amidohydrolase 1727 65.80 0 1933600..1933944 + 114 148260748 - Acry_1752 - hypothetical protein 1728 73.97 +1 1933945..1934355 - 136 148260749 - Acry_1753 - hypothetical protein 1729 72.08 0 1934517..1937951 - 1144 148260750 - Acry_1754 - transcription-repair coupling factor 1730 72.97 0 1938191..1940362 + 723 148260751 - Acry_1756 - DEAD/DEAH box helicase domain-containing protein 1731 73.33 +1 1940359..1940793 + 144 148260752 - Acry_1757 - NUDIX hydrolase 1732 64.42 0 1940786..1941763 - 325 148260753 - Acry_1758 - putative sulfite oxidase subunit YedY 1733 71.90 0 1941863..1942645 + 260 148260754 mazG Acry_1759 - nucleoside triphosphate pyrophosphohydrolase 1734 72.54 0 1942680..1943513 - 277 148260755 - Acry_1760 - inositol monophosphatase 1735 71.87 0 1943537..1944844 - 435 148260756 - Acry_1761 - GTP-binding protein, HSR1-related 1736 65.91 0 1944851..1945378 - 175 148260757 - Acry_1762 - RNA chaperone Hfq 1737 69.31 0 1945426..1946976 - 516 148260758 - Acry_1763 - hypothetical protein 1738 72.83 0 1947117..1948154 - 345 148260759 - Acry_1764 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1739 67.87 0 1948159..1948491 - 110 148260760 - Acry_1765 - ferredoxin 1740 75.85 +1 1948546..1949688 - 380 148260761 - Acry_1766 - aminotransferase, class V 1741 70.31 0 1949675..1950442 - 255 148260762 - Acry_1767 - serine O-acetyltransferase 1742 66.37 0 1950885..1951550 + 221 148260763 - Acry_1768 - alpha/beta fold family hydrolase-like protein 1743 65.66 0 1951607..1952404 - 265 148260764 - Acry_1769 - DeoR family transcriptional regulator 1744 60.22 -1 1952645..1953094 - 149 148260765 - Acry_1770 - MucR family transcriptional regulator 1745 64.02 0 1953254..1953517 + 87 148260766 - Acry_1771 - SirA family protein 1746 74.05 +1 1953486..1953932 - 148 148260767 - Acry_1772 - ribosomal-protein-alanine acetyltransferase 1747 78.27 +2 1953929..1954600 - 223 148260768 - Acry_1773 - peptidase M22, glycoprotease 1748 65.64 0 1954602..1955186 - 194 148260769 - Acry_1774 - hypothetical protein 1749 67.74 0 1955229..1955786 - 185 148260770 - Acry_1775 - NifU domain-containing protein 1750 68.44 0 1955991..1956497 + 168 148260771 - Acry_1776 - hypothetical protein 1751 75.99 +1 1956507..1957214 - 235 148260772 - Acry_1777 - methyltransferase type 11 1752 72.68 0 1957248..1957979 + 243 148260773 - Acry_1778 - hydroxyacylglutathione hydrolase 1753 71.68 0 1958065..1959960 - 631 148260774 - Acry_1779 - AMP-dependent synthetase and ligase 1754 72.25 0 1960352..1961014 + 220 148260775 - Acry_1780 - protein-L-isoaspartate(D-aspartate) O-methyltransferase 1755 68.66 0 1961064..1962617 + 517 148260776 - Acry_1781 - TolC family type I secretion outer membrane protein 1756 71.51 0 1962614..1963171 + 185 148260777 - Acry_1782 - hypothetical protein 1757 69.84 0 1963330..1966005 + 891 148260778 valS Acry_1783 - valyl-tRNA synthetase 1758 66.43 0 1966078..1966908 + 276 148260779 - Acry_1784 - band 7 protein 1759 73.66 +1 1967004..1968332 - 442 148260780 - Acry_1785 - peptidase U62, modulator of DNA gyrase 1760 67.61 0 1968329..1969594 - 421 148260781 - Acry_1786 - processing peptidase 1761 70.58 0 1969591..1970994 - 467 148260782 - Acry_1787 - threonine synthase 1762 67.27 0 1971057..1971557 - 166 148260783 - Acry_1788 - preprotein translocase subunit SecB 1763 71.82 0 1971641..1972591 + 316 148260784 - Acry_1789 - N-acetyl-gamma-glutamyl-phosphate reductase 1764 69.40 0 1972647..1973195 + 182 148260785 - Acry_1790 - 2'-5' RNA ligase 1765 68.70 0 1973308..1974834 - 508 148260786 - Acry_1791 - methylmalonate-semialdehyde dehydrogenase 1766 70.16 0 1974920..1975807 + 295 148260787 - Acry_1792 - LysR family transcriptional regulator 1767 67.68 0 1975868..1976359 - 163 148260788 - Acry_1793 - hypothetical protein 1768 71.32 0 1976383..1977435 + 350 148260789 - Acry_1794 - secretion protein HlyD family protein 1769 72.60 0 1977422..1979158 + 578 148260790 - Acry_1795 - ABC transporter related 1770 69.69 0 1979155..1980279 + 374 148260791 - Acry_1796 - ABC-2 type transporter 1771 68.20 0 1980285..1981391 + 368 148260792 - Acry_1797 - ABC-2 type transporter 1772 68.94 0 1981545..1983218 + 557 148260793 - Acry_1798 - hydroxylamine reductase 1773 69.73 0 1983295..1984305 + 336 148260794 - Acry_1799 - oxidoreductase FAD-binding subunit 1774 67.11 0 1984337..1984789 + 150 148260795 - Acry_1800 - BadM/Rrf2 family transcriptional regulator 1775 68.61 0 1984945..1986075 - 376 148260796 - Acry_1801 - cellulose biosynthesis protein CelD 1776 66.57 0 1986113..1987153 + 346 148260797 - Acry_1802 - hypothetical protein 1777 71.22 0 1987153..1988382 + 409 148260798 - Acry_1803 - glycosyl transferase, group 1 1778 72.05 0 1988400..1989440 + 346 148260799 - Acry_1804 - hypothetical protein 1779 72.74 0 1989437..1990555 + 372 148260800 - Acry_1805 - glycosyl transferase, group 1 1780 68.33 0 1990552..1990971 + 139 148260801 - Acry_1806 - hypothetical protein 1781 61.47 -1 1991304..1992266 - 320 148260802 - Acry_1808 - CRISPR-associated Cas1 family protein 1782 63.46 0 1992259..1992945 - 228 148260803 - Acry_1809 - CRISPR-associated Cse3 family protein 1783 65.20 0 1992942..1993691 - 249 148260804 - Acry_1810 - CRISPR-associated Cas5 family protein 1784 63.43 0 1993693..1994805 - 370 148260805 - Acry_1811 - CRISPR-associated Cse4 family protein 1785 65.56 0 1994805..1995344 - 179 148260806 - Acry_1812 - hypothetical protein 1786 61.01 -1 1995341..1996930 - 529 148260807 - Acry_1813 - CRISPR-associated Cse1 family protein 1787 63.11 -1 1997220..1999325 - 701 148260808 - Acry_1814 - CRISPR-associated helicase Cas3 1788 58.58 -1 2000148..2000456 - 102 148260809 - Acry_1815 - hypothetical protein 1789 62.61 -1 2000602..2002374 - 590 148260810 - Acry_1816 - ATPase central domain-containing protein 1790 60.22 -1 2002595..2003308 - 237 148260811 - Acry_1817 - hypothetical protein 1791 51.75 -2 2003548..2003775 + 75 148260812 - Acry_1818 - hypothetical protein 1792 52.06 -2 2003885..2004370 - 161 148260813 - Acry_1819 - hypothetical protein 1793 49.07 -2 2004619..2004942 - 107 148260814 - Acry_1820 - hypothetical protein 1794 57.49 -2 2005182..2005508 - 108 148260815 - Acry_1821 - NIPSNAP family protein 68.17 MEAN 5.03 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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