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Acidiphilium cryptum JF-5, complete genome - 1..3389227 3063 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1225 70.59 0 1382808..1384976 + 722 148260246 - Acry_1243 - malate synthase G 1226 67.46 0 1385053..1387455 + 800 148260247 - Acry_1244 - diguanylate phosphodiesterase 1227 78.50 +2 1387537..1388136 + 199 148260248 - Acry_1245 - hypothetical protein 1228 68.52 0 1388273..1388596 + 107 148260249 - Acry_1246 - hypothetical protein 1229 72.22 0 1388729..1388926 + 65 148260250 - Acry_1247 - hypothetical protein 1230 70.29 0 1388995..1390677 - 560 148260251 - Acry_1248 - polypeptide-transport-associated domain-containing protein 1231 74.22 +1 1390773..1391990 - 405 148260252 - Acry_1249 - hypothetical protein 1232 62.43 -1 1392509..1393075 + 188 148260253 - Acry_1250 - hypothetical protein 1233 51.44 -2 1393256..1393498 - 80 148260254 - Acry_1251 - hypothetical protein 1234 64.50 0 1393498..1394838 + 446 148260255 - Acry_1252 - membrane protein involved in aromatic hydrocarbon degradation 1235 70.11 0 1394953..1396578 + 541 148260256 - Acry_1253 - glucose-methanol-choline oxidoreductase 1236 70.27 0 1396604..1398019 + 471 148260257 - Acry_1254 - aldehyde dehydrogenase 1237 72.22 0 1398035..1398574 - 179 148260258 - Acry_1255 - hypothetical protein 1238 67.77 0 1398567..1400285 - 572 148260259 - Acry_1256 - AMP-dependent synthetase and ligase 1239 71.17 0 1400297..1401583 - 428 148260260 - Acry_1257 - acetyl-CoA acetyltransferase 1240 75.21 +1 1401595..1402437 - 280 148260261 - Acry_1258 - dehydratase 1241 74.58 +1 1402443..1403933 - 496 148260262 fabG Acry_1259 - 3-ketoacyl-(acyl-carrier-protein) reductase 1242 71.28 0 1403930..1406506 - 858 148260263 fadE Acry_1260 - acyl-CoA dehydrogenase 1243 71.62 0 1406539..1407609 - 356 148260264 - Acry_1261 - ferredoxin 1244 66.17 0 1407613..1408815 - 400 148260265 - Acry_1262 - alkane 1-monooxygenase 1245 73.06 0 1409168..1410481 - 437 148260266 - Acry_1263 - hypothetical protein 1246 65.94 0 1410831..1411517 + 228 148260267 - Acry_1264 - hypothetical protein 1247 69.91 0 1411510..1412157 + 215 148260268 - Acry_1265 - hypothetical protein 1248 73.33 +1 1412161..1413315 - 384 148260269 - Acry_1266 - hypothetical protein 1249 69.49 0 1413320..1414027 - 235 148260270 - Acry_1267 - GntR family transcriptional regulator 1250 69.59 0 1414124..1415491 + 455 148260271 - Acry_1268 - MmgE/PrpD family protein 1251 65.45 0 1415552..1416952 + 466 148260272 - Acry_1269 - major facilitator transporter 1252 65.63 0 1416984..1418045 + 353 148260273 - Acry_1270 - 3-isopropylmalate dehydrogenase 1253 63.14 0 1418070..1419854 - 594 148260274 - Acry_1271 - glycoside hydrolase 15-related protein 1254 66.67 0 1419870..1421144 - 424 148260275 - Acry_1272 - ribose 5-phosphate isomerase 1255 67.21 0 1421159..1421896 - 245 148260276 - Acry_1273 - 6-phosphogluconolactonase 1256 64.47 0 1421896..1422714 - 272 148260277 - Acry_1274 - Cof-like hydrolase 1257 64.30 0 1422711..1424315 - 534 148260278 - Acry_1275 - glucose-6-phosphate 1-dehydrogenase 1258 65.67 0 1424312..1425316 - 334 148260279 - Acry_1276 - 6-phosphogluconate dehydrogenase-like protein 1259 68.50 0 1425436..1428267 - 943 148260280 - Acry_1277 - bifunctional transaldolase/phosoglucose isomerase 1260 65.95 0 1428533..1430338 + 601 148260281 - Acry_1278 - GTP-binding protein LepA 1261 70.43 0 1430344..1431699 + 451 148260282 - Acry_1279 - hypothetical protein 1262 63.77 0 1431994..1432338 + 114 148260283 - Acry_1280 - hypothetical protein 1263 57.01 -2 1432340..1432981 - 213 148260284 - Acry_1281 - hypothetical protein 1264 62.91 -1 1433134..1433745 - 203 148260285 - Acry_1282 - transposase, IS4 family protein 1265 54.40 -2 1434193..1434624 - 143 148260286 - Acry_1283 - DoxX family protein 1266 62.24 -1 1434753..1435700 + 315 148260287 - Acry_1284 - LysR family transcriptional regulator 1267 63.23 0 1435888..1436265 + 125 148260288 - Acry_1285 - transposase IS3/IS911 family protein 1268 63.98 0 1436262..1436819 + 185 148260289 - Acry_1286 - hypothetical protein 1269 59.79 -1 1437024..1437212 + 62 148260290 - Acry_1287 - hypothetical protein 1270 67.91 0 1437294..1439069 - 591 148260291 - Acry_1288 - methyl-accepting chemotaxis sensory transducer 1271 54.32 -2 1439139..1439381 + 80 148260292 - Acry_1289 - hypothetical protein 1272 65.09 0 1439579..1441486 + 635 148260293 - Acry_1290 - hypothetical protein 1273 63.60 0 1441483..1442298 + 271 148260294 - Acry_1291 - hypothetical protein 1274 60.91 -1 1442302..1444230 + 642 148260295 - Acry_1292 - glycosyl transferase family protein 1275 61.22 -1 1444647..1445399 + 250 148260296 - Acry_1293 - hypothetical protein 1276 56.44 -2 1445553..1447712 - 719 148260297 - Acry_1294 - glycosyl transferase family protein 1277 62.62 -1 1448043..1448363 + 106 148260298 - Acry_1295 - hypothetical protein 1278 73.28 +1 1448420..1450204 - 594 148260299 - Acry_1296 - single-stranded-DNA-specific exonuclease RecJ 1279 69.91 0 1450189..1451175 - 328 148260300 glpX Acry_1297 - fructose 1,6-bisphosphatase II 1280 71.78 0 1451206..1452495 - 429 148260301 - Acry_1298 - homoserine dehydrogenase 1281 66.91 0 1452492..1453703 - 403 148260302 - Acry_1299 - aminotransferase 1282 74.31 +1 1453700..1454353 - 217 148260303 - Acry_1300 - hypothetical protein 1283 66.50 0 1454416..1456215 + 599 148260304 - Acry_1301 - poly(R)-hydroxyalkanoic acid synthase, class I 1284 76.55 +1 1456212..1457294 + 360 148260305 - Acry_1302 - glycosyl transferase, group 1 1285 70.52 0 1457308..1458603 + 431 148260306 - Acry_1303 - hypothetical protein 1286 65.32 0 1458600..1459562 + 320 148260307 - Acry_1304 - cobalamin synthesis protein, P47K 1287 70.11 0 1459559..1460605 + 348 148260308 - Acry_1305 - WD-40 repeat-containing protein 1288 68.97 0 1460607..1461431 + 274 148260309 - Acry_1306 - aldo/keto reductase 1289 68.69 0 1461498..1463330 - 610 148260310 - Acry_1307 - GTP-binding protein TypA 1290 74.51 +1 1463474..1463983 - 169 148260311 - Acry_1308 - hypothetical protein 1291 72.34 0 1464003..1465430 + 475 148260312 - Acry_1309 - major facilitator transporter 1292 72.77 0 1465441..1467309 - 622 148260313 - Acry_1310 - ABC transporter related 1293 67.38 0 1467404..1467826 + 140 148260314 - Acry_1311 - nucleoside-diphosphate kinase 1294 67.49 0 1467892..1468254 - 120 148260315 - Acry_1312 - hypothetical protein 1295 68.68 0 1468422..1469462 + 346 148260316 - Acry_1313 - cell shape determining protein MreB 1296 71.90 0 1469509..1470387 + 292 148260317 - Acry_1314 - UspA domain-containing protein 1297 73.56 +1 1470400..1470849 + 149 148260318 - Acry_1315 - MarR family transcriptional regulator 1298 70.48 0 1470930..1471637 + 235 148260319 - Acry_1316 - pirin domain-containing protein 1299 68.70 0 1471857..1473383 + 508 148260320 - Acry_1317 - protease Do 1300 66.45 0 1473540..1474466 + 308 148260321 - Acry_1318 - sulfate adenylyltransferase subunit 2 1301 69.72 0 1474466..1476331 + 621 148260322 - Acry_1319 - sulfate adenylyltransferase, large subunit 1302 71.53 0 1476406..1477515 + 369 148260323 - Acry_1320 - chorismate synthase 1303 73.15 0 1477688..1478782 - 364 148260324 - Acry_1321 - hypothetical protein 1304 65.87 0 1478850..1480106 + 418 148260325 - Acry_1322 - extracellular ligand-binding receptor 1305 75.69 +1 1480246..1480677 + 143 148260326 - Acry_1323 - hypothetical protein 1306 70.57 0 1480764..1482173 - 469 148260327 - Acry_1324 - 2-alkenal reductase 1307 73.88 +1 1482178..1483023 - 281 148260328 - Acry_1325 - glutamyl-tRNA synthetase, class Ic 1308 75.78 +1 1483073..1483741 + 222 148260329 - Acry_1326 - phospholipase/carboxylesterase 1309 65.95 0 1483889..1484449 + 186 148260330 - Acry_1327 - HNH endonuclease 1310 67.98 0 1484503..1485717 + 404 148260331 - Acry_1328 - tryptophan synthase subunit beta 1311 73.41 +1 1485714..1486544 + 276 148260332 trpA Acry_1329 - tryptophan synthase subunit alpha 1312 73.85 +1 1486669..1487934 - 421 148260333 - Acry_1330 - phosphoribosylamine--glycine ligase 1313 74.15 +1 1487989..1489377 + 462 148260334 - Acry_1331 - exodeoxyribonuclease VII, large subunit 1314 78.16 +1 1489390..1490094 - 234 148260335 - Acry_1332 - hypothetical protein 1315 70.31 0 1490091..1490666 - 191 148260336 - Acry_1333 - ECF subfamily RNA polymerase sigma-24 factor 1316 69.98 0 1491134..1491586 + 150 148260337 - Acry_1334 - ferric uptake regulator family protein 1317 68.51 0 1491583..1492395 + 270 148260338 - Acry_1335 - putative hemolysin-like protein 1318 72.16 0 1492456..1492965 + 169 148260339 - Acry_1336 - hypothetical protein 1319 66.48 0 1492981..1494627 + 548 148260340 - Acry_1337 - tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit 1320 67.93 0 1494635..1495030 + 131 148260341 - Acry_1338 - glyoxalase/bleomycin resistance protein/dioxygenase 1321 74.08 +1 1495027..1496064 + 345 148260342 - Acry_1339 - queuosine biosynthesis protein 1322 71.62 0 1496061..1497191 + 376 148260343 - Acry_1340 - queuine tRNA-ribosyltransferase 1323 68.82 0 1497172..1497636 + 154 148260344 - Acry_1341 - 7-cyano-7-deazaguanine reductase 1324 72.98 0 1497629..1498690 + 353 148260345 - Acry_1342 - hypothetical protein 68.17 MEAN 5.03 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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