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Acidiphilium cryptum JF-5, complete genome - 1..3389227 3063 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 981 68.63 0 1099149..1099403 + 84 148260002 - Acry_0993 - sarcosine oxidase, delta subunit, heterotetrameric 982 72.77 0 1099400..1102396 + 998 148260003 - Acry_0994 - sarcosine oxidase alpha subunit family protein 983 73.08 0 1102389..1102949 + 186 148260004 - Acry_0995 - sarcosine oxidase, gamma subunit 984 72.28 0 1103025..1104395 + 456 148260005 - Acry_0996 - L-serine dehydratase 1 985 78.08 +1 1104540..1105310 - 256 148260006 - Acry_0997 - electron transfer flavoprotein beta-subunit 986 77.16 +1 1105307..1106383 - 358 148260007 - Acry_0998 - electron transfer flavoprotein, alpha subunit 987 74.73 +1 1106380..1108227 - 615 148260008 - Acry_0999 - hypothetical protein 988 70.05 0 1108227..1110263 - 678 148260009 - Acry_1000 - NADH:flavin oxidoreductase/NADH oxidase 989 71.59 0 1110260..1111234 - 324 148260010 - Acry_1001 - AraC family transcriptional regulator 990 68.77 0 1111234..1112325 - 363 148260011 - Acry_1002 - oxidoreductase FAD-binding subunit 991 65.72 0 1112322..1113593 - 423 148260012 - Acry_1003 - Rieske (2Fe-2S) domain-containing protein 992 71.88 0 1113737..1114792 - 351 148260013 - Acry_1004 - AraC family transcriptional regulator 993 70.20 0 1114913..1116469 - 518 148260014 - Acry_1005 - sulfatase 994 75.68 +1 1116554..1117507 + 317 148260015 - Acry_1006 - LysR family transcriptional regulator 995 73.07 0 1117476..1118225 - 249 148260016 - Acry_1007 - ubiquinone biosynthesis O-methyltransferase 996 68.47 0 1118323..1119540 + 405 148260017 - Acry_1008 - aspartate kinase 997 71.97 0 1119537..1120574 + 345 148260018 - Acry_1009 - 2-nitropropane dioxygenase, NPD 998 73.90 +1 1120552..1122819 + 755 148260019 - Acry_1010 - phosphoenolpyruvate-protein phosphotransferase PtsP 999 74.98 +1 1122940..1124250 + 436 148260020 - Acry_1011 - hypothetical protein 1000 69.33 0 1124273..1125397 + 374 148260021 ispG Acry_1012 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1001 70.79 0 1125481..1126716 + 411 148260022 hisS Acry_1013 - histidyl-tRNA synthetase 1002 71.86 0 1126729..1127787 + 352 148260023 - Acry_1014 - peptide chain release factor 1 1003 75.68 +1 1127784..1128626 + 280 148260024 - Acry_1015 - HemK family modification methylase 1004 69.21 0 1128867..1129298 + 143 148260025 - Acry_1016 - hypothetical protein 1005 70.00 0 1129329..1130018 - 229 148260026 - Acry_1017 - protein tyrosine/serine phosphatase 1006 74.85 +1 1130048..1130536 + 162 148260027 - Acry_1018 - CHAP domain-containing protein 1007 73.84 +1 1130592..1132124 + 510 148260028 - Acry_1019 - integral membrane protein MviN 1008 68.66 0 1132168..1133169 + 333 148260029 - Acry_1020 - tryptophanyl-tRNA synthetase 1009 68.85 0 1133229..1134647 - 472 148260030 - Acry_1021 - phosphomannomutase 1010 66.89 0 1134640..1135518 - 292 148260031 - Acry_1022 - UTP-glucose-1-phosphate uridylyltransferase 1011 67.14 0 1135658..1136080 + 140 148260032 - Acry_1023 - dehydratase 1012 69.77 0 1136088..1136990 - 300 148260033 - Acry_1024 - alpha/beta hydrolase fold 1013 63.65 0 1137080..1137610 - 176 148260034 nusG Acry_1025 - transcription antitermination protein NusG 1014 62.56 -1 1137620..1137814 - 64 148260035 - Acry_1026 - preprotein translocase, SecE subunit 1015 71.79 0 1138376..1138648 + 90 148260036 - Acry_1027 - hypothetical protein 1016 64.47 0 1138857..1139630 + 257 148260037 - Acry_1028 - hypothetical protein 1017 64.42 0 1140129..1140752 - 207 148260038 - Acry_1030 - hypothetical protein 1018 65.30 0 1141279..1144797 + 1172 148260039 - Acry_1031 - outer membrane autotransporter 1019 74.82 +1 1145054..1146697 + 547 148260040 - Acry_1032 - acyl-CoA dehydrogenase domain-containing protein 1020 72.51 0 1146712..1147737 + 341 148260041 - Acry_1033 - aldose 1-epimerase 1021 66.96 0 1147894..1148925 + 343 148260042 - Acry_1034 - recA protein 1022 53.47 -2 1149274..1149576 + 100 148260043 - Acry_1035 - hypothetical protein 1023 53.86 -2 1149580..1149993 - 137 148260044 - Acry_1036 - hypothetical protein 1024 77.73 +1 1150314..1151054 - 246 148260045 - Acry_1037 - hypothetical protein 1025 68.37 0 1151079..1153715 + 878 148260046 alaS Acry_1038 - alanyl-tRNA synthetase 1026 71.52 0 1153735..1157547 - 1270 148260047 - Acry_1039 - delta-1-pyrroline-5-carboxylate dehydrogenase 1027 73.97 +1 1157682..1159583 + 633 148260048 - Acry_1040 - polysaccharide biosynthesis protein CapD 1028 71.77 0 1159593..1160747 + 384 148260049 - Acry_1041 - DegT/DnrJ/EryC1/StrS aminotransferase 1029 70.98 0 1160734..1161684 + 316 148260050 - Acry_1042 - proline iminopeptidase 1030 76.12 +1 1161838..1162821 + 327 148260051 - Acry_1043 - TRAP transporter solute receptor TAXI family protein 1031 70.94 0 1163022..1165598 + 858 148260052 - Acry_1044 - RND efflux transporter 1032 76.81 +1 1165595..1165801 + 68 148260053 - Acry_1045 - hypothetical protein 1033 68.82 0 1165863..1167716 + 617 148260054 - Acry_1046 - dihydroxy-acid dehydratase 1034 71.76 0 1167951..1169168 - 405 148260055 - Acry_1047 - major facilitator transporter 1035 65.54 0 1169370..1170080 - 236 148260056 - Acry_1048 - ABC transporter related 1036 66.80 0 1170077..1170841 - 254 148260057 - Acry_1049 - ABC transporter related 1037 66.67 0 1170838..1171824 - 328 148260058 - Acry_1050 - inner-membrane translocator 1038 64.37 0 1171821..1172690 - 289 148260059 - Acry_1051 - inner-membrane translocator 1039 65.47 0 1172812..1174065 - 417 148260060 - Acry_1052 - extracellular ligand-binding receptor 1040 67.80 0 1174273..1174977 - 234 148260061 - Acry_1053 - tRNA (guanine-N(7)-)-methyltransferase 1041 67.85 0 1174967..1176154 - 395 148260062 - Acry_1054 - S-adenosylmethionine synthetase 1042 73.25 +1 1176276..1177019 - 247 148260063 - Acry_1055 - dihydrodipicolinate reductase 1043 72.36 0 1177080..1177553 - 157 148260064 - Acry_1056 - GCN5-related N-acetyltransferase 1044 66.85 0 1177556..1179190 - 544 148260065 - Acry_1057 - electron-transferring-flavoprotein dehydrogenase 1045 71.72 0 1179272..1180102 + 276 148260066 - Acry_1058 - phage SPO1 DNA polymerase-related protein 1046 71.59 0 1180214..1182040 + 608 148260067 - Acry_1059 - lytic transglycosylase, catalytic 1047 71.20 0 1182101..1183777 + 558 148260068 - Acry_1060 - TPR repeat-containing protein 1048 71.59 0 1183832..1184887 - 351 148260069 - Acry_1061 - oxidoreductase domain-containing protein 1049 63.32 0 1184972..1185958 - 328 148260070 - Acry_1062 - periplasmic binding protein/LacI transcriptional regulator 1050 68.12 0 1186018..1187115 - 365 148260071 - Acry_1063 - monosaccharide-transporting ATPase 1051 68.18 0 1187112..1188626 - 504 148260072 - Acry_1064 - ABC transporter related 1052 69.12 0 1188623..1189396 - 257 148260073 - Acry_1065 - periplasmic lipoprotein-like protein 1053 70.24 0 1189581..1190336 + 251 148260074 - Acry_1066 - transcriptional regulator NanR 1054 72.91 0 1190417..1191682 + 421 148260075 - Acry_1067 - ribulose-bisphosphate carboxylase 1055 74.93 +1 1191679..1193070 + 463 148260076 - Acry_1068 - type III effector Hrp-dependent outer protein 1056 69.64 0 1193067..1193906 + 279 148260077 - Acry_1069 - hypothetical protein 1057 66.48 0 1193965..1195008 + 347 148260078 - Acry_1070 - ABC-type sugar transport system periplasmic component-like protein 1058 74.03 +1 1195024..1197480 + 818 148260079 - Acry_1071 - inner-membrane translocator 1059 72.75 0 1197477..1198430 + 317 148260080 - Acry_1072 - inner-membrane translocator 1060 71.22 0 1198499..1199245 + 248 148260081 - Acry_1073 - NADPH-dependent FMN reductase 1061 73.29 +1 1199256..1200191 + 311 148260082 - Acry_1074 - phosphate transporter 1062 68.43 0 1201026..1202162 + 378 148260083 - Acry_1076 - MscS mechanosensitive ion channel 1063 73.92 +1 1202181..1202759 - 192 148260084 - Acry_1077 - nitrile hydratase 1064 71.09 0 1202756..1203049 - 97 148260085 - Acry_1078 - hypothetical protein 1065 67.28 0 1203043..1203369 - 108 148260086 - Acry_1079 - hypothetical protein 1066 70.31 0 1203515..1204942 - 475 148260087 - Acry_1080 - major facilitator transporter 1067 72.13 0 1205141..1206403 + 420 148260088 - Acry_1081 - fumarylacetoacetase 1068 71.87 0 1206464..1207405 - 313 148260089 - Acry_1082 - hypothetical protein 1069 78.20 +1 1207440..1208072 - 210 148260090 - Acry_1083 - hypothetical protein 1070 71.43 0 1208098..1208664 - 188 148260091 - Acry_1084 - hypothetical protein 1071 69.52 0 1208787..1210400 + 537 148260092 - Acry_1085 - hypothetical protein 1072 73.75 +1 1210422..1211339 - 305 148260093 - Acry_1086 - alpha/beta hydrolase domain-containing protein 1073 72.82 0 1211351..1212211 - 286 148260094 - Acry_1087 - short-chain dehydrogenase/reductase SDR 1074 71.67 0 1212236..1213735 - 499 148260095 - Acry_1088 - flavoprotein involved in K+ transport-like protein 1075 70.61 0 1213871..1214554 + 227 148260096 - Acry_1089 - TetR family transcriptional regulator 1076 66.04 0 1214603..1216198 - 531 148260097 - Acry_1090 - isocitrate lyase 1077 77.33 +1 1216395..1217069 - 224 148260098 - Acry_1091 - hypothetical protein 1078 75.71 +1 1217059..1217622 - 187 148260099 - Acry_1092 - ECF subfamily RNA polymerase sigma-24 factor 1079 71.82 0 1217696..1218064 - 122 148260100 - Acry_1093 - hypothetical protein 1080 68.13 0 1218064..1218678 - 204 148260101 - Acry_1094 - Heme/copper-type cytochrome/quinol oxidase subunit 3-like protein 68.17 MEAN 5.03 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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