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Acidobacteria bacterium Ellin345, complete genome - 1..5650368 4777 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 51 62.24 +1 49043..50599 + 518 94967082 - Acid345_0051 - glutamyl-tRNA synthetase / glutamate--tRNA(Gln) ligase 52 57.76 0 50853..51200 - 115 94967083 - Acid345_0052 - hypothetical protein 53 56.67 0 51200..51559 - 119 94967084 - Acid345_0053 - hypothetical protein 54 57.06 0 51556..51909 - 117 94967085 - Acid345_0054 - hypothetical protein 55 58.75 0 51930..52826 - 298 94967086 - Acid345_0055 - hypothetical protein 56 59.00 0 52837..55080 - 747 94967087 - Acid345_0056 - peptidase S9B, dipeptidylpeptidase IV-like 57 60.95 0 55120..56361 - 413 94967088 - Acid345_0057 - UvrB/UvrC protein 58 57.45 0 56939..57220 - 93 94967089 - Acid345_0058 - hypothetical protein 59 49.82 -2 57238..58062 - 274 94967090 - Acid345_0059 - hypothetical protein 60 60.92 0 58072..58854 - 260 94967091 - Acid345_0060 - DNA replication protein, DNAC-like 61 61.05 0 59076..59360 + 94 94967092 - Acid345_0061 - hypothetical protein 62 60.93 0 59402..60796 + 464 94967093 - Acid345_0062 - tRNA(Ile)-lysidine synthetase-like 63 59.64 0 60793..61347 + 184 94967094 - Acid345_0063 - phosphoribosyltransferase 64 60.40 0 61544..63457 + 637 94967095 - Acid345_0064 - FtsH peptidase 65 57.27 0 64148..64924 + 258 94967096 - Acid345_0065 - Crp/FNR family transcriptional regulator 66 57.58 0 65299..66486 - 395 94967097 - Acid345_0066 - histidine kinase 67 56.66 0 66467..68065 - 532 94967098 - Acid345_0067 - putative circadian clock protein, KaiC 68 61.11 0 68435..68704 + 89 94967099 - Acid345_0068 - hypothetical protein 69 57.48 0 69030..70118 - 362 94967100 - Acid345_0069 - beta-lactamase-like 70 57.59 0 70249..71427 + 392 94967101 - Acid345_0070 - acyltransferase 3 71 60.30 0 71503..72429 + 308 94967102 - Acid345_0071 - hypothetical protein 72 62.92 +1 72508..75312 - 934 94967103 - Acid345_0072 - response regulator receiver protein 73 60.78 0 75499..76992 - 497 94967104 - Acid345_0073 - DNA uptake lipoprotein-like 74 58.96 0 77217..77891 - 224 94967105 - Acid345_0074 - ribulose-5-phosphate 3-epimerase 75 58.97 0 77989..78339 - 116 94967106 - Acid345_0075 - glyoxalase/bleomycin resistance protein/dioxygenase 76 61.76 +1 78524..78910 + 128 94967107 - Acid345_0076 - hypothetical protein 77 55.41 -1 79132..79584 + 150 94967108 - Acid345_0077 - TonB-like protein 78 61.23 0 79589..80269 - 226 94967109 - Acid345_0078 - TENA/THI-4 protein 79 53.23 -2 80450..81193 + 247 94967110 - Acid345_0079 - PEGA domain-containing protein 80 60.10 0 81260..83209 + 649 94967111 - Acid345_0080 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 81 57.98 0 83277..83771 + 164 94967112 - Acid345_0081 - DinB 82 60.27 0 83951..84247 - 98 94967113 - Acid345_0082 - histone-like DNA-binding protein 83 60.00 0 84580..85074 - 164 94967114 - Acid345_0083 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 84 57.85 0 85148..85873 + 241 94967115 - Acid345_0084 - response regulator receiver protein 85 59.95 0 85870..86748 - 292 94967116 lpxC Acid345_0085 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 86 60.57 0 87032..88573 + 513 94967117 - Acid345_0086 - hypothetical protein 87 59.52 0 88570..89073 - 167 94967118 - Acid345_0087 - hypothetical protein 88 61.16 0 89263..89898 - 211 94967119 - Acid345_0088 - ribonuclease H 89 50.19 -2 90498..90764 - 88 94967120 - Acid345_0089 - hypothetical protein 90 61.36 +1 90769..91560 - 263 94967121 - Acid345_0090 - metallophosphoesterase 91 62.58 +1 91563..92540 - 325 94967122 - Acid345_0091 - oligopeptide/dipeptide ABC transporter, ATPase subunit 92 58.04 0 93788..94216 - 142 94967123 - Acid345_0092 - hypothetical protein 93 58.76 0 94286..94981 - 231 94967124 - Acid345_0093 - ThiJ/PfpI 94 56.48 0 95369..96733 + 454 94967125 - Acid345_0094 - parallel beta-helix repeat-containing protein 95 56.41 0 96748..97254 - 168 94967126 - Acid345_0095 - hypothetical protein 96 62.14 +1 97525..98319 - 264 94967127 - Acid345_0096 - hypothetical protein 97 58.81 0 98433..98954 + 173 94967128 - Acid345_0097 - hypothetical protein 98 59.83 0 99032..102703 - 1223 94967129 - Acid345_0098 - protease-like 99 63.24 +1 103054..104016 + 320 94967130 - Acid345_0099 - selenophosphate synthase 100 59.52 0 104112..105413 + 433 94967131 - Acid345_0100 - hypothetical protein 101 62.34 +1 105618..108044 + 808 94967132 - Acid345_0101 - ABC efflux pump, inner membrane subunit 102 56.15 0 108100..108603 + 167 94967133 - Acid345_0102 - hypothetical protein 103 59.94 0 108611..108937 - 108 94967134 - Acid345_0103 - hypothetical protein 104 56.51 0 109055..109507 - 150 94967135 - Acid345_0104 - hypothetical protein 105 60.51 0 109913..114349 + 1478 94967136 - Acid345_0105 - protease-like 106 62.37 +1 114467..114862 + 131 94967137 - Acid345_0106 - putative S-adenosylmethionine decarboxylase proenzyme 107 58.61 0 114859..115491 + 210 94967138 - Acid345_0107 - hypothetical protein 108 58.73 0 115491..116813 + 440 94967139 - Acid345_0108 - hypothetical protein 109 53.01 -2 116806..116988 + 60 94967140 - Acid345_0109 - hypothetical protein 110 53.99 -1 116989..117201 + 70 94967141 - Acid345_0110 - hypothetical protein 111 58.65 0 117202..118698 + 498 94967142 - Acid345_0111 - spermidine synthase 112 62.30 +1 118746..120209 + 487 94967143 - Acid345_0112 - FAD dependent oxidoreductase 113 58.64 0 120371..121591 + 406 94967144 - Acid345_0113 - hypothetical protein 114 61.62 +1 121595..122782 + 395 94967145 - Acid345_0114 - L-aspartate aminotransferase / phosphoserine aminotransferase 115 62.97 +1 123038..124633 + 531 94967146 - Acid345_0115 - D-3-phosphoglycerate dehydrogenase 116 61.57 +1 124797..125894 - 365 94967147 - Acid345_0116 - peptidase M50 117 58.47 0 125987..126547 + 186 94967148 - Acid345_0117 - hypothetical protein 118 54.84 -1 126540..127097 - 185 94967149 - Acid345_0118 - hypothetical protein 119 61.76 +1 127364..128707 + 447 94967150 - Acid345_0119 - FolC bifunctional protein 120 61.85 +1 128769..129578 + 269 94967151 - Acid345_0120 - 1-acyl-sn-glycerol-3-phosphate acyltransferase 121 61.46 +1 129575..130342 + 255 94967152 - Acid345_0121 - peptidase C26 122 62.65 +1 130343..131113 + 256 94967153 - Acid345_0122 - short-chain dehydrogenase/reductase SDR 123 58.39 0 131140..132033 + 297 94967154 - Acid345_0123 - hypothetical protein 124 62.46 +1 132687..133280 + 197 94967155 - Acid345_0124 - hypothetical protein 125 58.83 0 133433..134083 + 216 94967156 - Acid345_0125 - NADP oxidoreductase, coenzyme F420-dependent 126 63.16 +1 134177..134917 + 246 94967157 - Acid345_0126 - MIP family channel protein 127 59.23 0 134925..136067 - 380 94967158 - Acid345_0127 - alanine-glyoxylate aminotransferase 128 60.91 0 136144..136734 - 196 94967159 - Acid345_0128 - TetR family transcriptional regulator 129 61.99 +1 136788..137471 + 227 94967160 - Acid345_0129 - hypothetical protein 130 63.37 +1 137413..138657 - 414 94967161 - Acid345_0130 - hypothetical protein 131 59.95 0 138688..139521 - 277 94967162 - Acid345_0131 - hypothetical protein 132 59.46 0 139622..142411 + 929 94967163 - Acid345_0132 - valyl-tRNA synthetase 133 59.39 0 142546..143424 + 292 94967164 - Acid345_0133 - nicotinate-nucleotide pyrophosphorylase [carboxylating] 134 55.47 -1 143505..143906 + 133 94967165 - Acid345_0134 - ferredoxin-like 135 62.45 +1 143985..145076 + 363 94967166 - Acid345_0135 - biotin--acetyl-CoA-carboxylase ligase 136 57.70 0 145086..145910 + 274 94967167 - Acid345_0136 - pantothenate kinase 137 58.95 0 145993..146679 + 228 94967168 - Acid345_0137 - hypothetical protein 138 59.73 0 146694..148019 + 441 94967169 - Acid345_0138 - (Uracil-5)-methyltransferase 139 57.82 0 148033..148326 + 97 94967170 - Acid345_0139 - YCII-like protein 140 62.10 +1 148330..150936 + 868 94967171 - Acid345_0140 - DNA internalization-related competence protein ComEC/Rec2 141 63.12 +1 151107..151388 - 93 94967172 - Acid345_0141 - hypothetical protein 142 59.15 0 151432..152070 - 212 94967173 - Acid345_0142 - HAD family hydrolase 143 63.79 +1 152107..153009 - 300 94967174 - Acid345_0143 - Dyp-type peroxidase 144 60.09 0 153075..154229 + 384 94967175 - Acid345_0144 - queuine tRNA-ribosyltransferase 145 54.32 -1 154407..154730 + 107 94967176 - Acid345_0145 - protein translocase subunit yajC 146 59.45 0 154746..156353 + 535 94967177 - Acid345_0146 - protein-export membrane protein SecD 147 56.13 0 156415..157629 + 404 94967178 - Acid345_0147 - protein translocase subunit secF 148 57.28 0 157760..158494 + 244 94967179 - Acid345_0148 - TonB-like protein 149 59.52 0 158707..159462 + 251 94967180 - Acid345_0149 - MotA/TolQ/ExbB proton channel 150 56.44 0 159499..159948 + 149 94967181 - Acid345_0150 - biopolymer transport protein ExbD/TolR 58.57 MEAN 2.67 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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