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Acidobacteria bacterium Ellin345, complete genome - 1..5650368 4777 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 871 55.05 -1 1089183..1090688 + 501 94967902 - Acid345_0873 - radical SAM family Fe-S protein 872 55.38 -1 1090682..1092187 + 501 94967903 - Acid345_0874 - radical SAM family Fe-S protein 873 56.99 0 1092196..1093683 + 495 94967904 - Acid345_0875 - radical SAM family Fe-S protein 874 53.75 -1 1093683..1095068 + 461 94967905 - Acid345_0876 - radical SAM family Fe-S protein 875 54.78 -1 1095065..1095880 + 271 94967906 - Acid345_0877 - hypothetical protein 876 55.65 -1 1095877..1096884 + 335 94967907 - Acid345_0878 - hypothetical protein 877 54.33 -1 1096881..1098347 + 488 94967908 - Acid345_0879 - radical SAM family Fe-S protein 878 54.13 -1 1098353..1100242 + 629 94967909 - Acid345_0880 - amidohydrolase 879 53.88 -1 1100214..1101269 + 351 94967910 - Acid345_0881 - radical SAM family Fe-S protein 880 55.62 -1 1101454..1102512 + 352 94967911 - Acid345_0882 - hypothetical protein 881 54.31 -1 1102509..1102775 + 88 94967912 - Acid345_0883 - hypothetical protein 882 50.41 -2 1102786..1103148 + 120 94967913 - Acid345_0884 - cytochrome c oxidase, subunit II 883 56.26 0 1103151..1103621 + 156 94967914 - Acid345_0885 - cytochrome c, class I 884 55.53 -1 1103623..1104861 + 412 94967915 - Acid345_0886 - hypothetical protein 885 53.37 -1 1104947..1105495 + 182 94967916 - Acid345_0887 - transcription antitermination protein nusG 886 56.15 0 1105492..1108314 + 940 94967917 - Acid345_0888 - polysaccharide export protein 887 54.08 -1 1108325..1109611 + 428 94967918 - Acid345_0889 - lipopolysaccharide biosynthesis 888 56.97 0 1109595..1110935 + 446 94967919 - Acid345_0890 - polysaccharide biosynthesis protein 889 54.23 -1 1110938..1112119 + 393 94967920 - Acid345_0891 - O-antigen polymerase 890 52.14 -2 1112116..1112955 + 279 94967921 - Acid345_0892 - glycosyl transferase family protein 891 54.53 -1 1112965..1114134 + 389 94967922 - Acid345_0893 - glycosyl transferase, group 1 892 53.21 -2 1114131..1114955 + 274 94967923 - Acid345_0894 - WecB/TagA/CpsF family glycosyl transferase 893 54.08 -1 1115049..1116065 + 338 94967924 - Acid345_0895 - NAD-dependent epimerase/dehydratase 894 54.29 -1 1116062..1118032 + 656 94967925 - Acid345_0896 - hypothetical protein 895 55.95 0 1118148..1119500 + 450 94967926 - Acid345_0897 - L-serine dehydratase 1 896 54.12 -1 1119662..1122013 - 783 94967927 - Acid345_0898 - Alpha-glucosidase 897 54.70 -1 1122129..1123214 + 361 94967928 - Acid345_0899 - LacI family transcription regulator 898 54.42 -1 1123798..1127382 + 1194 94967929 - Acid345_0900 - hypothetical protein 899 54.57 -1 1127585..1129642 + 685 94967930 - Acid345_0901 - Beta-galactosidase 900 53.43 -1 1129639..1131156 + 505 94967931 - Acid345_0902 - Alpha-L-fucosidase 901 55.96 0 1131222..1132379 - 385 94967932 - Acid345_0903 - xylose isomerase 902 60.34 0 1132395..1133912 - 505 94967933 - Acid345_0904 - xylulokinase 903 57.44 0 1133922..1135124 - 400 94967934 - Acid345_0905 - ABC sugar transporter, inner membrane subunit 904 55.79 -1 1135121..1136674 - 517 94967935 - Acid345_0906 - ABC sugar transporter, ATPase subunit 905 55.90 -1 1136677..1137735 - 352 94967936 - Acid345_0907 - ABC sugar transporter, periplasmic binding protein 906 55.03 -1 1137962..1139035 + 357 94967937 - Acid345_0908 - LacI family transcription regulator 907 54.71 -1 1139184..1140965 - 593 94967938 - Acid345_0909 - ASPIC/UnbV 908 56.67 0 1141340..1144972 + 1210 94967939 - Acid345_0910 - Cna B-type protein 909 57.11 0 1145129..1146676 + 515 94967940 - Acid345_0911 - TPR repeat-containing protein 910 56.16 0 1146681..1148927 + 748 94967941 - Acid345_0912 - TPR repeat-containing protein 911 55.81 -1 1148962..1150767 + 601 94967942 - Acid345_0913 - hypothetical protein 912 54.49 -1 1150885..1153413 + 842 94967943 - Acid345_0914 - MscS mechanosensitive ion channel 913 53.33 -1 1153410..1154384 - 324 94967944 - Acid345_0915 - TPR repeat-containing protein 914 57.04 0 1154426..1155412 - 328 94967945 - Acid345_0916 - glycosidase, PH1107-related 915 57.26 0 1155559..1157259 + 566 94967946 - Acid345_0917 - TPR repeat-containing protein 916 56.01 0 1157558..1161169 + 1203 94967947 - Acid345_0918 - Cna B-type protein 917 59.13 0 1161273..1163024 + 583 94967948 - Acid345_0919 - ASPIC/UnbV 918 55.87 -1 1163025..1164839 - 604 94967949 - Acid345_0920 - ASPIC/UnbV 919 55.18 -1 1164973..1166679 + 568 94967950 - Acid345_0921 - alpha amylase 920 55.96 0 1166740..1168374 - 544 94967951 - Acid345_0922 - Alpha,alpha-trehalase 921 56.68 0 1168453..1169193 - 246 94967952 - Acid345_0923 - high-affinity nickel-transporter 922 57.02 0 1169231..1169914 - 227 94967953 - Acid345_0924 - hydrogenase accessory protein HypB 923 56.81 0 1169911..1170255 - 114 94967954 - Acid345_0925 - hydrogenase expression/synthesis, HypA 924 59.83 0 1170255..1172477 - 740 94967955 - Acid345_0926 - (NiFe) hydrogenase maturation protein HypF 925 61.15 0 1172838..1173689 + 283 94967956 - Acid345_0927 - hypothetical protein 926 59.08 0 1173690..1178369 + 1559 94967957 - Acid345_0928 - alpha-2-macroglobulin-like 927 57.33 0 1178369..1179139 + 256 94967958 - Acid345_0929 - hypothetical protein 928 60.22 0 1179071..1180777 - 568 94967959 - Acid345_0930 - sporulation protein and related proteins 929 62.30 +1 1180774..1181688 - 304 94967960 - Acid345_0931 - penicillin-binding protein, transpeptidase 930 57.75 0 1181770..1183665 - 631 94967961 - Acid345_0932 - hypothetical protein 931 57.46 0 1183677..1187261 - 1194 94967962 - Acid345_0933 - Cna B-type protein 932 59.24 0 1187429..1188829 + 466 94967963 - Acid345_0934 - pyridoxal-dependent decarboxylase 933 57.94 0 1188841..1191327 - 828 94967964 - Acid345_0935 - PAS/PAC sensor hybrid histidine kinase 934 60.57 0 1191601..1193748 + 715 94967965 - Acid345_0936 - TonB-dependent receptor 935 61.41 +1 1193775..1194383 + 202 94967966 - Acid345_0937 - hypothetical protein 936 59.75 0 1194386..1195846 + 486 94967967 - Acid345_0938 - periplasmic sensor signal transduction histidine kinase 937 61.27 +1 1195922..1196329 + 135 94967968 - Acid345_0939 - response regulator receiver protein 938 60.71 0 1196737..1196988 - 83 94967969 - Acid345_0940 - hypothetical protein 939 58.71 0 1197457..1199832 + 791 94967970 - Acid345_0941 - hypothetical protein 940 59.10 0 1199905..1201305 - 466 94967971 - Acid345_0942 - glutamate dehydrogenase 941 54.39 -1 1201396..1201737 - 113 94967972 - Acid345_0943 - hypothetical protein 942 59.68 0 1202075..1204549 + 824 94967973 - Acid345_0944 - glycoside hydrolase/PKD 943 55.27 -1 1204559..1205251 - 230 94967974 - Acid345_0945 - hypothetical protein 944 57.65 0 1205483..1206358 - 291 94967975 - Acid345_0946 - hypothetical protein 945 56.80 0 1206444..1207031 - 195 94967976 - Acid345_0947 - hypothetical protein 946 62.27 +1 1207078..1208511 + 477 94967977 - Acid345_0948 - DNA-3-methyladenine glycosylase II / transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S-methyltransferase 947 54.55 -1 1208823..1209284 + 153 94967978 - Acid345_0949 - hypothetical protein 948 59.31 0 1209295..1210626 + 443 94967979 - Acid345_0950 - acetyl-CoA hydrolase/transferase 949 60.14 0 1210649..1210939 + 96 94967980 - Acid345_0951 - 4Fe-4S ferredoxin, iron-sulfur binding 950 59.07 0 1210923..1211975 + 350 94967981 - Acid345_0952 - ketoisovalerate ferredoxin oxidoreductase, alpha subunit 951 61.71 +1 1211989..1213440 + 483 94967982 - Acid345_0953 - thiamine pyrophosphate enzyme-like TPP-binding 952 63.15 +1 1213617..1214696 + 359 94967983 - Acid345_0954 - hypothetical protein 953 54.25 -1 1214697..1215131 - 144 94967984 - Acid345_0955 - hypothetical protein 954 56.11 0 1215128..1215724 - 198 94967985 - Acid345_0956 - hypothetical protein 955 59.13 0 1215721..1216410 - 229 94967986 - Acid345_0957 - hypothetical protein 956 54.74 -1 1216679..1217047 - 122 94967987 - Acid345_0958 - hypothetical protein 957 60.03 0 1217050..1218195 - 381 94967988 - Acid345_0959 - serine phosphatase 958 55.76 -1 1218366..1218686 + 106 94967989 - Acid345_0960 - hypothetical protein 959 60.87 0 1218688..1220085 - 465 94967990 - Acid345_0961 - diguanylate cyclase with PAS/PAC sensor 960 60.81 0 1220176..1221285 + 369 94967991 - Acid345_0962 - glycosy hydrolase family protein 961 60.38 0 1221290..1223770 + 826 94967992 - Acid345_0963 - Alpha-glucosiduronase 962 61.60 +1 1223760..1224983 + 407 94967993 - Acid345_0964 - lipolytic enzyme, G-D-S-L 963 55.83 -1 1225107..1225955 + 282 94967994 - Acid345_0965 - hypothetical protein 964 60.83 0 1226127..1227017 + 296 94967995 - Acid345_0966 - phenazine biosynthesis PhzC/PhzF protein 965 60.50 0 1227209..1227646 + 145 94967996 - Acid345_0967 - response regulator receiver protein 966 55.56 -1 1228049..1228300 + 83 94967997 - Acid345_0968 - hypothetical protein 967 56.38 0 1228389..1229360 + 323 94967998 - Acid345_0969 - hypothetical protein 968 59.89 0 1229516..1230238 + 240 94967999 - Acid345_0970 - ABC transporter, ATPase subunit 969 58.87 0 1230248..1232248 - 666 94968000 - Acid345_0971 - amidohydrolase 3 970 59.36 0 1232472..1233155 - 227 94968001 - Acid345_0972 - two component LuxR family transcriptional regulator 58.57 MEAN 2.67 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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