version 1.0
Acidobacteria bacterium Ellin345, complete genome - 1..5650368 4777 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 634 60.33 0 779302..779790 + 162 94967665 - Acid345_0634 - AsnC family transcriptional regulator 635 57.96 0 779936..780268 + 110 94967666 - Acid345_0635 - DsrC-like protein 636 58.15 0 780278..781474 + 398 94967667 - Acid345_0636 - cysteine desulphurase-like protein 637 56.39 0 781554..782828 + 424 94967668 - Acid345_0637 - beta-lactamase 638 56.01 0 783336..786545 + 1069 94967669 - Acid345_0638 - hypothetical protein 639 54.53 -1 786696..788450 + 584 94967670 - Acid345_0639 - mannose-6-phosphate isomerase-like protein 640 56.36 0 788477..789388 + 303 94967671 - Acid345_0640 - Alpha/beta hydrolase 641 57.60 0 789389..790546 - 385 94967672 - Acid345_0641 - hypothetical protein 642 56.79 0 790548..791306 - 252 94967673 - Acid345_0642 - short-chain dehydrogenase/reductase SDR 643 59.68 0 791303..792118 - 271 94967674 - Acid345_0643 - short-chain dehydrogenase/reductase SDR 644 57.29 0 792129..795635 - 1168 94967675 - Acid345_0644 - glycosyl hydrolases 38-like 645 58.38 0 795629..796822 - 397 94967676 - Acid345_0645 - mandelate racemase/muconate lactonizing enzyme 646 55.16 -1 796837..797679 - 280 94967677 - Acid345_0646 - gluconolactonase 647 56.13 0 797794..798666 + 290 94967678 - Acid345_0647 - 5-carboxymethyl-2-hydroxymuconate delta-isomerase 648 56.67 0 798689..799798 + 369 94967679 - Acid345_0648 - hypothetical protein 649 55.76 -1 799799..800605 - 268 94967680 - Acid345_0649 - putative esterase 650 57.30 0 800618..803104 - 828 94967681 - Acid345_0650 - Alpha-glucosidase 651 60.00 0 803132..804076 - 314 94967682 - Acid345_0651 - sugar kinase 652 58.67 0 804260..804772 + 170 94967683 - Acid345_0652 - glucose-6-phosphate isomerase 653 58.82 0 804789..805565 + 258 94967684 - Acid345_0653 - glucose-6-phosphate isomerase 654 55.71 -1 805567..806898 - 443 94967685 - Acid345_0654 - major facilitator superfamily sugar transporter 655 57.24 0 807027..809276 + 749 94967686 - Acid345_0655 - hypothetical protein 656 59.06 0 809283..810137 - 284 94967687 - Acid345_0656 - DeoR family transcriptional regulator 657 58.30 0 810246..810986 - 246 94967688 - Acid345_0657 - cyclic nucleotide-binding protein 658 55.64 -1 811658..812800 + 380 94967689 - Acid345_0658 - amidohydrolase 2 659 60.32 0 812835..813701 + 288 94967690 - Acid345_0659 - DeoR family transcriptional regulator 660 57.35 0 813714..814625 - 303 94967691 - Acid345_0660 - ribokinase family sugar kinase 661 61.48 +1 814704..815648 + 314 94967692 - Acid345_0661 - 1-phosphofructokinase 662 55.69 -1 815839..817341 + 500 94967693 - Acid345_0662 - parallel beta-helix repeat-containing protein 663 57.12 0 817417..820947 + 1176 94967694 - Acid345_0663 - TonB-dependent receptor 664 57.13 0 820956..823010 + 684 94967695 - Acid345_0664 - glycoside hydrolase, clan GH-D 665 57.44 0 823007..824209 + 400 94967696 - Acid345_0665 - sugar isomerase (SIS) 666 57.93 0 824300..826795 + 831 94967697 - Acid345_0666 - multi-sensor hybrid histidine kinase 667 60.09 0 826792..828402 - 536 94967698 - Acid345_0667 - AMP-dependent synthetase and ligase 668 58.41 0 828465..829844 - 459 94967699 - Acid345_0668 - cystathionine gamma-lyase 669 57.38 0 829849..830451 - 200 94967700 - Acid345_0669 - isochorismatase hydrolase 670 58.26 0 830559..830915 + 118 94967701 - Acid345_0670 - hypothetical protein 671 55.56 -1 830928..831404 + 158 94967702 - Acid345_0671 - hypothetical protein 672 61.72 +1 831385..832233 - 282 94967703 - Acid345_0672 - putative RNA methylase 673 60.86 0 832308..832703 - 131 94967704 - Acid345_0673 - hypothetical protein 674 54.92 -1 832766..833029 + 87 94967705 - Acid345_0674 - hypothetical protein 675 56.20 0 833093..833350 - 85 94967706 - Acid345_0675 - hypothetical protein 676 57.10 0 833571..834260 + 229 94967707 - Acid345_0676 - TonB-like protein 677 58.87 0 834586..834957 + 123 94967708 - Acid345_0677 - hypothetical protein 678 59.48 0 835119..836384 + 421 94967709 - Acid345_0678 - amino acid transporter 679 60.27 0 836381..837130 + 249 94967710 - Acid345_0679 - putative lipase/esterase 680 59.69 0 837127..838401 - 424 94967711 - Acid345_0680 - kynureninase 681 57.20 0 838401..839762 - 453 94967712 - Acid345_0681 - monooxygenase, FAD-binding 682 58.78 0 839766..841655 - 629 94967713 - Acid345_0682 - tryptophan 2,3-dioxygenase 683 58.00 0 841658..842188 - 176 94967714 - Acid345_0683 - 3-hydroxyanthranilate 3,4-dioxygenase 684 56.83 0 842198..842614 - 138 94967715 - Acid345_0684 - endoribonuclease L-PSP 685 59.60 0 842617..844074 - 485 94967716 - Acid345_0685 - betaine-aldehyde dehydrogenase 686 55.94 0 844179..844877 - 232 94967717 - Acid345_0686 - phospholipase/carboxylesterase 687 61.96 +1 844985..846493 + 502 94967718 - Acid345_0687 - hypothetical protein 688 60.23 0 846535..847776 + 413 94967719 - Acid345_0688 - L-threonine ammonia-lyase 689 57.74 0 847883..849058 + 391 94967720 - Acid345_0689 - twitching motility protein 690 54.71 -1 849099..849533 + 144 94967721 - Acid345_0690 - hypothetical protein 691 61.36 +1 849651..852590 + 979 94967722 - Acid345_0691 - hypothetical protein 692 59.96 0 852741..854603 + 620 94967723 - Acid345_0692 - PAS/PAC sensor signal transduction histidine kinase 693 61.55 +1 854692..855747 + 351 94967724 - Acid345_0693 - uroporphyrinogen decarboxylase 694 61.95 +1 855744..856655 + 303 94967725 - Acid345_0694 - ferrochelatase 695 62.60 +1 856658..858133 + 491 94967726 - Acid345_0695 - protoporphyrinogen oxidase 696 56.92 0 858208..858792 + 194 94967727 - Acid345_0696 - TetR family transcriptional regulator 697 57.66 0 858864..859274 + 136 94967728 - Acid345_0697 - hypothetical protein 698 61.52 +1 859342..859866 + 174 94967729 - Acid345_0698 - hypothetical protein 699 55.08 -1 860447..861007 + 186 94967730 - Acid345_0699 - hypothetical protein 700 60.34 0 861071..861781 + 236 94967731 - Acid345_0700 - hypothetical protein 701 59.02 0 862009..863538 - 509 94967732 - Acid345_0701 - hypothetical protein 702 58.47 0 863674..864429 - 251 94967733 - Acid345_0702 - DNA-3-methyladenine glycosylase II 703 57.56 0 864426..865040 - 204 94967734 - Acid345_0703 - regulatory protein RecX 704 58.77 0 865132..866283 - 383 94967735 - Acid345_0704 - twitching motility protein 705 56.62 0 866476..867480 - 334 94967736 - Acid345_0705 - hypothetical protein 706 61.87 +1 867578..868912 + 444 94967737 - Acid345_0706 - hypothetical protein 707 57.58 0 868920..869480 - 186 94967738 - Acid345_0707 - hypothetical protein 708 56.58 0 869837..870421 + 194 94967739 - Acid345_0708 - MglA protein 709 59.92 0 870793..872913 - 706 94967740 - Acid345_0709 - glycoside hydrolase 15-related 710 59.59 0 873258..874430 - 390 94967741 - Acid345_0710 - ATPase AAA-2 711 59.77 0 874808..875416 + 202 94967742 - Acid345_0711 - signal transduction histidine kinase, nitrogen specific, NtrB 712 60.38 0 875623..876561 + 312 94967743 - Acid345_0712 - branched chain amino acid aminotransferase / branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase 713 56.80 0 876601..877350 + 249 94967744 - Acid345_0713 - translation initiation factor 3 714 51.67 -2 877483..877722 + 79 94967745 - Acid345_0714 - 50S ribosomal protein L35P 715 57.10 0 877864..878229 + 121 94967746 rplT Acid345_0715 - 50S ribosomal protein L20 716 61.35 +1 878311..879420 + 369 94967747 - Acid345_0716 - phenylalanyl-tRNA synthetase, alpha subunit 717 56.64 0 879417..879785 - 122 94967748 - Acid345_0717 - hypothetical protein 718 61.01 0 879874..881889 + 671 94967749 - Acid345_0718 - phenylalanyl-tRNA synthetase beta subunit 719 54.55 -1 882130..882426 + 98 94967750 - Acid345_0719 - hypothetical protein 720 55.83 -1 882521..882880 + 119 94967751 - Acid345_0720 - hypothetical protein 721 59.29 0 883095..884327 + 410 94967752 - Acid345_0721 - ABC efflux pump, inner membrane subunit 722 58.04 0 884328..885590 + 420 94967753 - Acid345_0722 - ABC efflux pump, inner membrane subunit 723 59.24 0 885627..886784 + 385 94967754 - Acid345_0723 - ceramide glucosyltransferase, putative 724 56.54 0 886788..888041 - 417 94967755 - Acid345_0724 - ceramide glucosyltransferase, putative 725 57.49 0 888152..889981 - 609 94967756 - Acid345_0725 - glycosyl transferase family protein 726 61.85 +1 890319..891419 - 366 94967757 - Acid345_0726 - short-chain dehydrogenase/reductase SDR 727 57.59 0 891435..892205 - 256 94967758 - Acid345_0727 - formate/nitrate transporter 728 64.66 +2 892415..893362 + 315 94967759 - Acid345_0728 - hypothetical protein 729 57.91 0 893439..894443 - 334 94967760 - Acid345_0729 - dihydroorotate dehydrogenase 2 730 59.31 0 894436..898062 - 1208 94967761 - Acid345_0730 - pyruvate--ferredoxin (flavodoxin) oxidoreductase 731 58.15 0 898443..899840 - 465 94967762 - Acid345_0731 - phospholipase C 732 60.45 0 900051..900758 - 235 94967763 - Acid345_0732 - TPR repeat-containing protein 733 58.33 0 900894..901145 - 83 94967764 - Acid345_0733 - hypothetical protein 58.57 MEAN 2.67 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.