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Acidobacteria bacterium Ellin345, complete genome - 1..5650368 4777 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3858 65.15 +2 4573312..4575354 + 680 94970889 - Acid345_3863 - pseudouridine synthase, Rsu 3859 61.07 0 4575351..4576475 + 374 94970890 - Acid345_3864 - aminotransferase 3860 62.84 +1 4576617..4577660 - 347 94970891 - Acid345_3865 - glucokinase 3861 60.07 0 4577747..4578565 - 272 94970892 - Acid345_3866 - formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase 3862 62.42 +1 4578698..4579309 + 203 94970893 - Acid345_3867 - lysine exporter protein LysE/YggA 3863 59.89 0 4579716..4581044 + 442 94970894 - Acid345_3868 - adenylosuccinate synthetase 3864 61.46 +1 4581083..4581370 + 95 94970895 - Acid345_3869 - antibiotic biosynthesis monooxygenase 3865 60.96 0 4581377..4582234 + 285 94970896 - Acid345_3870 - hypothetical protein 3866 55.67 -1 4582231..4582821 - 196 94970897 - Acid345_3871 - TPR repeat-containing protein 3867 55.05 -1 4582823..4583020 - 65 94970898 - Acid345_3872 - 4-oxalocrotonate tautomerase 3868 59.15 0 4583085..4583510 - 141 94970899 - Acid345_3873 - nucleoside diphosphate kinase 3869 61.22 0 4583533..4584414 - 293 94970900 - Acid345_3874 - succinyl-CoA synthetase (ADP-forming) alpha subunit 3870 59.97 0 4584415..4585593 - 392 94970901 - Acid345_3875 - succinyl-CoA synthetase (ADP-forming) beta subunit 3871 58.82 0 4585733..4586140 + 135 94970902 - Acid345_3876 - hypothetical protein 3872 60.74 0 4586148..4586822 + 224 94970903 - Acid345_3877 - MOSC 3873 56.49 0 4586915..4587700 - 261 94970904 - Acid345_3878 - TonB-like protein 3874 61.15 0 4588023..4588421 + 132 94970905 - Acid345_3879 - hypothetical protein 3875 60.74 0 4588484..4589377 - 297 94970906 - Acid345_3880 - beta-lactamase-like 3876 59.31 0 4589457..4590122 - 221 94970907 - Acid345_3881 - O-methyltransferase family protein 3877 62.07 +1 4590514..4591536 - 340 94970908 - Acid345_3882 - peptidase M48, Ste24p 3878 58.88 0 4591541..4591951 - 136 94970909 - Acid345_3883 - hypothetical protein 3879 60.98 0 4591970..4593973 - 667 94970910 - Acid345_3884 - adenylate/guanylate cyclase 3880 62.07 +1 4594076..4595119 + 347 94970911 - Acid345_3885 - anthranilate phosphoribosyltransferase 3881 57.02 0 4595272..4596795 + 507 94970912 - Acid345_3886 - levanase 3882 60.19 0 4596966..4599389 + 807 94970913 - Acid345_3887 - ABC efflux pump, inner membrane subunit 3883 60.13 0 4599450..4601345 - 631 94970914 - Acid345_3888 - peptidase M56, BlaR1 3884 59.45 0 4601342..4601743 - 133 94970915 - Acid345_3889 - CopY family transcriptional regulator 3885 59.82 0 4601857..4603287 - 476 94970916 - Acid345_3890 - beta-lactamase-like 3886 58.62 0 4603471..4604178 - 235 94970917 - Acid345_3891 - hypothetical protein 3887 61.60 +1 4604301..4605779 + 492 94970918 - Acid345_3892 - GntR family transcriptional regulator 3888 59.23 0 4605793..4606626 - 277 94970919 - Acid345_3893 - LytR/AlgR family transcriptional regulator 3889 57.47 0 4606796..4607719 - 307 94970920 - Acid345_3894 - DoxX 3890 57.45 0 4607876..4611325 - 1149 94970921 - Acid345_3895 - TonB-dependent receptor 3891 55.69 -1 4611720..4612466 + 248 94970922 - Acid345_3896 - hypothetical protein 3892 56.58 0 4612612..4613553 - 313 94970923 - Acid345_3897 - NmrA-like 3893 61.32 +1 4613680..4613922 + 80 94970924 - Acid345_3898 - hypothetical protein 3894 53.61 -1 4613950..4614240 + 96 94970925 - Acid345_3899 - hypothetical protein 3895 55.65 -1 4614380..4614733 - 117 94970926 - Acid345_3900 - glyoxalase/bleomycin resistance protein/dioxygenase 3896 55.63 -1 4614863..4615741 - 292 94970927 - Acid345_3901 - hypothetical protein 3897 55.68 -1 4616603..4617676 - 357 94970928 - Acid345_3902 - histone deacetylase superfamily protein 3898 55.77 -1 4617748..4618380 + 210 94970929 - Acid345_3903 - hypothetical protein 3899 61.60 +1 4618545..4620260 + 571 94970930 - Acid345_3904 - Sel1 3900 61.58 +1 4620304..4621659 + 451 94970931 - Acid345_3905 - aminotransferase 3901 54.85 -1 4621656..4621892 + 78 94970932 - Acid345_3906 - hypothetical protein 3902 59.07 0 4621969..4623192 + 407 94970933 - Acid345_3907 - hypothetical protein 3903 59.20 0 4623193..4623996 - 267 94970934 - Acid345_3908 - DeoR family transcriptional regulator 3904 58.78 0 4624580..4628041 + 1153 94970935 - Acid345_3909 - TonB-dependent receptor 3905 57.84 0 4628110..4628517 - 135 94970936 - Acid345_3910 - hypothetical protein 3906 57.60 0 4628572..4628946 - 124 94970937 - Acid345_3911 - hypothetical protein 3907 58.90 0 4628943..4629779 - 278 94970938 - Acid345_3912 - hypothetical protein 3908 55.14 -1 4629935..4630333 + 132 94970939 - Acid345_3913 - hypothetical protein 3909 52.78 -2 4630364..4630615 - 83 94970940 - Acid345_3914 - hypothetical protein 3910 52.94 -2 4630623..4630775 - 50 94970941 - Acid345_3915 - hypothetical protein 3911 58.37 0 4630839..4631465 + 208 94970942 def Acid345_3916 - peptide deformylase 3912 55.00 -1 4631468..4631707 - 79 94970943 - Acid345_3917 - hypothetical protein 3913 55.88 -1 4631745..4632782 - 345 94970944 - Acid345_3918 - homoserine O-acetyltransferase 3914 58.85 0 4632900..4634114 - 404 94970945 - Acid345_3919 - 2-amino-3-ketobutyrate coenzyme A ligase 3915 56.98 0 4634589..4635641 - 350 94970946 tdh Acid345_3920 - L-threonine 3-dehydrogenase 3916 61.87 +1 4635810..4637414 - 534 94970947 - Acid345_3921 - 5-oxoprolinase (ATP-hydrolyzing) 3917 58.62 0 4637956..4638390 + 144 94970948 - Acid345_3922 - MerR family transcriptional regulator 3918 61.73 +1 4638796..4640052 - 418 94970949 - Acid345_3923 - major facilitator transporter 3919 58.43 0 4640148..4640414 + 88 94970950 - Acid345_3924 - hypothetical protein 3920 55.33 -1 4640501..4641082 + 193 94970951 - Acid345_3925 - putative phophoslipid binding protein 3921 57.26 0 4641208..4641579 + 123 94970952 - Acid345_3926 - response regulator receiver protein 3922 59.43 0 4641582..4642106 - 174 94970953 - Acid345_3927 - thioredoxin-like 3923 55.63 -1 4642106..4642540 - 144 94970954 - Acid345_3928 - hypothetical protein 3924 58.96 0 4642537..4643211 - 224 94970955 - Acid345_3929 - HAD family hydrolase 3925 56.60 0 4643219..4644529 - 436 94970956 - Acid345_3930 - glucose/galactose transporter 3926 58.68 0 4644695..4646071 + 458 94970957 tnaA Acid345_3931 - tryptophanase 3927 60.07 0 4646846..4648012 + 388 94970958 - Acid345_3932 - response regulator receiver modulated serine phosphatase 3928 57.97 0 4648068..4648964 + 298 94970959 - Acid345_3933 - WD-40-like beta propeller repeat-containing protein 3929 58.77 0 4649007..4652360 - 1117 94970960 - Acid345_3934 - hypothetical protein 3930 57.99 0 4652503..4654035 + 510 94970961 - Acid345_3935 - IgA peptidase. metallo peptidase. MEROPS family M64 3931 59.93 0 4654159..4656399 + 746 94970962 - Acid345_3936 - TPR repeat-containing serine/threonin protein kinase 3932 58.98 0 4656455..4657885 + 476 94970963 - Acid345_3937 - hypothetical protein 3933 61.71 +1 4657882..4658628 + 248 94970964 - Acid345_3938 - nucleotidyl transferase 3934 60.18 0 4658689..4660692 + 667 94970965 - Acid345_3939 - hypothetical protein 3935 57.94 0 4660708..4662174 - 488 94970966 - Acid345_3940 - hypothetical protein 3936 56.54 0 4662323..4663300 - 325 94970967 - Acid345_3941 - TPR repeat-containing protein 3937 61.65 +1 4663469..4664266 + 265 94970968 - Acid345_3942 - hypothetical protein 3938 62.47 +1 4664263..4665024 + 253 94970969 - Acid345_3943 - oxidoreductase, molybdopterin binding 3939 61.46 +1 4665094..4665612 - 172 94970970 - Acid345_3944 - hypothetical protein 3940 59.69 0 4665817..4666662 + 281 94970971 - Acid345_3945 - enoyl-CoA hydratase/isomerase 3941 58.63 0 4666732..4668000 + 422 94970972 - Acid345_3946 - hypothetical protein 3942 55.48 -1 4668019..4669422 - 467 94970973 - Acid345_3947 - hypothetical protein 3943 57.80 0 4669801..4670916 + 371 94970974 - Acid345_3948 - NHL repeat-containing protein 3944 58.42 0 4671044..4672267 - 407 94970975 - Acid345_3949 - OmpA/MotB family outer membrane protein 3945 57.68 0 4672498..4674567 + 689 94970976 - Acid345_3950 - phosphodiesterase/alkaline phosphatase D 3946 53.45 -1 4675335..4675682 + 115 94970977 - Acid345_3951 - ArsR family transcriptional regulator 3947 51.61 -2 4675669..4676166 + 165 94970978 - Acid345_3952 - hypothetical protein 3948 56.21 0 4676210..4676773 + 187 94970979 - Acid345_3953 - hypothetical protein 3949 58.23 0 4676884..4677369 - 161 94970980 - Acid345_3954 - GCN5-related N-acetyltransferase 3950 53.55 -1 4677835..4678764 - 309 94970981 - Acid345_3955 - hypothetical protein 3951 54.15 -1 4679151..4680077 + 308 94970982 - Acid345_3956 - hypothetical protein 3952 55.35 -1 4680093..4682168 + 691 94970983 - Acid345_3957 - beta-lactamase-like 3953 55.38 -1 4682343..4683095 + 250 94970984 - Acid345_3958 - carbonic anhydrase 3954 52.16 -2 4683104..4684192 + 362 94970985 - Acid345_3959 - hypothetical protein 3955 54.97 -1 4684330..4685064 + 244 94970986 - Acid345_3960 - hypothetical protein 3956 53.49 -1 4685319..4686335 - 338 94970987 - Acid345_3961 - hypothetical protein 3957 53.61 -1 4687201..4688418 + 405 94970988 - Acid345_3962 - hypothetical protein 58.57 MEAN 2.67 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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