version 1.0
Acidobacteria bacterium Ellin345, complete genome - 1..5650368 4777 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3500 60.68 0 4136441..4136824 + 127 94970531 - Acid345_3504 - response regulator receiver protein 3501 60.06 0 4136828..4138825 + 665 94970532 - Acid345_3505 - response regulator receiver modulated diguanylate cyclase 3502 58.58 0 4138891..4142478 - 1195 94970533 - Acid345_3506 - Cna B-type protein 3503 59.03 0 4142760..4145222 - 820 94970534 kgd Acid345_3507 - alpha-ketoglutarate decarboxylase 3504 59.38 0 4145358..4146002 - 214 94970535 - Acid345_3508 - hypothetical protein 3505 58.07 0 4146130..4146897 + 255 94970536 - Acid345_3509 - short-chain dehydrogenase/reductase SDR 3506 56.16 0 4147029..4149341 + 770 94970537 - Acid345_3510 - hypothetical protein 3507 51.03 -2 4149473..4149715 - 80 94970538 - Acid345_3511 - hypothetical protein 3508 60.36 0 4149774..4150661 - 295 94970539 - Acid345_3512 - ECF subfamily RNA polymerase sigma-24 factor 3509 59.33 0 4150741..4151244 + 167 94970540 - Acid345_3513 - alkylhydroperoxidase AhpD 3510 57.78 0 4151296..4152780 - 494 94970541 - Acid345_3514 - PAS/PAC sensor signal transduction histidine kinase 3511 55.48 -1 4153491..4154795 + 434 94970542 - Acid345_3515 - hypothetical protein 3512 56.55 0 4154859..4156064 + 401 94970543 - Acid345_3516 - hypothetical protein 3513 51.92 -2 4158811..4159488 + 225 94970544 - Acid345_3517 - hypothetical protein 3514 58.88 0 4159600..4159920 - 106 94970545 - Acid345_3518 - hypothetical protein 3515 62.62 +1 4159954..4162917 - 987 94970546 - Acid345_3519 - multi-sensor signal transduction histidine kinase 3516 60.08 0 4163044..4165002 - 652 94970547 - Acid345_3520 - acetyl-coenzyme A synthetase 3517 60.49 0 4165115..4167025 - 636 94970548 - Acid345_3521 - AMP-dependent synthetase and ligase 3518 58.31 0 4167493..4168497 - 334 94970549 - Acid345_3522 - hypothetical protein 3519 58.42 0 4168825..4169952 + 375 94970550 - Acid345_3523 - glycoside hydrolase family protein 3520 58.01 0 4169949..4170329 - 126 94970551 - Acid345_3524 - response regulator receiver protein 3521 58.84 0 4170405..4173305 - 966 94970552 - Acid345_3525 - Cna B-type protein 3522 61.61 +1 4173401..4174627 - 408 94970553 - Acid345_3526 - hypothetical protein 3523 58.40 0 4174762..4175112 - 116 94970554 - Acid345_3527 - TPR repeat-containing protein 3524 55.98 0 4175192..4175425 + 77 94970555 - Acid345_3528 - hypothetical protein 3525 60.33 0 4175422..4176210 - 262 94970556 - Acid345_3529 - hypothetical protein 3526 59.52 0 4176382..4177290 - 302 94970557 - Acid345_3530 - hypothetical protein 3527 58.02 0 4177354..4178556 - 400 94970558 - Acid345_3531 - secretion protein HlyD 3528 60.53 0 4178806..4180173 + 455 94970559 - Acid345_3532 - hypothetical protein 3529 58.93 0 4180173..4181090 + 305 94970560 - Acid345_3533 - ABC peptide transporter, inner membrane subunit 3530 58.44 0 4181171..4181887 - 238 94970561 - Acid345_3534 - hypothetical protein 3531 58.36 0 4181981..4182955 - 324 94970562 - Acid345_3535 - GTP-binding protein Era 3532 58.31 0 4182955..4184223 - 422 94970563 - Acid345_3536 - CBS domain-containing protein 3533 56.43 0 4184220..4184678 - 152 94970564 - Acid345_3537 - hypothetical protein 3534 60.19 0 4184735..4185814 - 359 94970565 - Acid345_3538 - PhoH-like protein 3535 55.94 0 4186196..4186885 + 229 94970566 - Acid345_3539 - hypothetical protein 3536 51.47 -2 4187269..4187676 - 135 94970567 - Acid345_3540 - hypothetical protein 3537 61.50 +1 4187646..4189580 - 644 94970568 - Acid345_3541 - ATP-dependent DNA helicase RecQ 3538 52.27 -2 4189840..4190235 + 131 94970569 - Acid345_3542 - hypothetical protein 3539 62.56 +1 4190727..4192286 - 519 94970570 - Acid345_3543 - thiol oxidoreductase-like 3540 61.84 +1 4192723..4195560 + 945 94970571 - Acid345_3544 - lysine decarboxylase transcriptional regulator, CadC 3541 52.28 -2 4195579..4196433 - 284 94970572 - Acid345_3545 - hypothetical protein 3542 64.07 +2 4196497..4196766 + 89 94970573 - Acid345_3546 - SSU ribosomal protein S20P 3543 57.51 0 4196927..4198750 + 607 94970574 - Acid345_3547 - hypothetical protein 3544 54.81 -1 4199132..4199536 - 134 94970575 - Acid345_3548 - hypothetical protein 3545 59.06 0 4199590..4199970 - 126 94970576 - Acid345_3549 - hypothetical protein 3546 57.34 0 4200100..4200603 - 167 94970577 - Acid345_3550 - GCN5-related N-acetyltransferase 3547 62.82 +1 4200695..4201084 + 129 94970578 - Acid345_3551 - GCN5-related N-acetyltransferase 3548 60.03 0 4201108..4202523 + 471 94970579 - Acid345_3552 - hypothetical protein 3549 57.01 0 4202589..4204028 + 479 94970580 - Acid345_3553 - hypothetical protein 3550 58.46 0 4204075..4205475 - 466 94970581 - Acid345_3554 - hypothetical protein 3551 59.08 0 4205805..4206371 + 188 94970582 - Acid345_3555 - putative phophoslipid binding protein 3552 58.68 0 4206526..4207401 - 291 94970583 - Acid345_3556 - TPR repeat-containing protein 3553 49.40 -2 4207587..4207835 + 82 94970584 - Acid345_3557 - CopG family transcriptional regulator 3554 57.54 0 4207825..4208109 + 94 94970585 - Acid345_3558 - addiction module toxin, RelE/StbE 3555 63.53 +1 4208106..4209029 - 307 94970586 - Acid345_3559 - hypothetical protein 3556 59.47 0 4209054..4209470 - 138 94970587 - Acid345_3560 - hypothetical protein 3557 57.75 0 4209584..4210783 - 399 94970588 - Acid345_3561 - hypothetical protein 3558 61.26 +1 4210970..4212763 + 597 94970589 - Acid345_3562 - hypothetical protein 3559 59.52 0 4212885..4213262 + 125 94970590 - Acid345_3563 - PadR family transcriptional regulator 3560 63.83 +1 4213259..4213858 + 199 94970591 - Acid345_3564 - membrane protein 3561 62.04 +1 4213910..4216285 + 791 94970592 - Acid345_3565 - hypothetical protein 3562 63.62 +1 4216404..4216994 + 196 94970593 - Acid345_3566 - S-isoprenylcysteine methyltransferase-like protein 3563 61.79 +1 4217070..4218341 + 423 94970594 - Acid345_3567 - LolC/E family lipoprotein releasing system, transmembrane protein 3564 54.12 -1 4218384..4218869 + 161 94970595 - Acid345_3568 - hypothetical protein 3565 56.58 0 4218826..4219797 + 323 94970596 - Acid345_3569 - hypothetical protein 3566 61.54 +1 4219822..4220601 + 259 94970597 - Acid345_3570 - ABC transporter, ATPase subunit 3567 61.30 +1 4220699..4222300 + 533 94970598 - Acid345_3571 - hypothetical protein 3568 57.92 0 4222579..4223184 + 201 94970599 - Acid345_3572 - ABC transporter, ATPase subunit 3569 58.77 0 4223414..4225870 + 818 94970600 - Acid345_3573 - ATPase AAA-2 3570 55.50 -1 4226115..4226678 + 187 94970601 - Acid345_3574 - TetR family transcriptional regulator 3571 59.26 0 4226780..4227157 + 125 94970602 - Acid345_3575 - hypothetical protein 3572 59.45 0 4227221..4228051 + 276 94970603 - Acid345_3576 - short-chain dehydrogenase/reductase SDR 3573 59.10 0 4228186..4229004 - 272 94970604 - Acid345_3577 - hypothetical protein 3574 62.69 +1 4229071..4229850 - 259 94970605 - Acid345_3578 - hypothetical protein 3575 61.79 +1 4230476..4230844 + 122 94970606 - Acid345_3579 - hypothetical protein 3576 60.41 0 4230868..4231746 - 292 94970607 - Acid345_3580 - hypothetical protein 3577 60.83 0 4231917..4232738 + 273 94970608 - Acid345_3581 - Alpha/beta hydrolase 3578 56.29 0 4232832..4233284 - 150 94970609 - Acid345_3582 - hypothetical protein 3579 55.91 0 4233398..4236967 - 1189 94970610 - Acid345_3583 - hypothetical protein 3580 62.69 +1 4237005..4237583 + 192 94970611 - Acid345_3584 - glyoxalase/bleomycin resistance protein/dioxygenase 3581 62.94 +1 4237599..4238483 - 294 94970612 - Acid345_3585 - methyltransferase type 11 3582 55.02 -1 4238897..4239145 + 82 94970613 - Acid345_3586 - hypothetical protein 3583 58.49 0 4239149..4239466 + 105 94970614 - Acid345_3587 - XRE family transcriptional regulator 3584 59.23 0 4239476..4240699 - 407 94970615 - Acid345_3588 - hypothetical protein 3585 60.26 0 4240957..4242096 + 379 94970616 - Acid345_3589 - hypothetical protein 3586 55.22 -1 4242192..4242584 + 130 94970617 - Acid345_3590 - hypothetical protein 3587 63.54 +1 4242658..4245120 - 820 94970618 - Acid345_3591 - ABC efflux pump, inner membrane subunit 3588 62.90 +1 4245317..4247548 - 743 94970619 - Acid345_3592 - hypothetical protein 3589 64.24 +2 4248147..4248722 - 191 94970620 - Acid345_3593 - hypothetical protein 3590 59.12 0 4248873..4250330 + 485 94970621 - Acid345_3594 - integrin-like protein 3591 60.31 0 4250403..4252904 - 833 94970622 - Acid345_3595 - kelch domain-containing protein 3592 59.85 0 4253151..4254323 - 390 94970623 - Acid345_3596 - Rh-like protein/ammonium transporter 3593 58.28 0 4254575..4255039 - 154 94970624 - Acid345_3597 - hypothetical protein 3594 56.08 0 4255137..4255514 + 125 94970625 - Acid345_3598 - hypothetical protein 3595 59.57 0 4255581..4257665 - 694 94970626 - Acid345_3599 - hypothetical protein 3596 60.15 0 4258308..4260608 - 766 94970627 - Acid345_3600 - periplasmic sensor hybrid histidine kinase 3597 60.07 0 4260739..4261890 - 383 94970628 - Acid345_3601 - hypothetical protein 3598 60.86 0 4262219..4263889 + 556 94970629 - Acid345_3602 - TPR repeat-containing protein 3599 61.70 +1 4263977..4264318 + 113 94970630 - Acid345_3603 - PadR family transcriptional regulator 58.57 MEAN 2.67 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0