version 1.0
Acidobacteria bacterium Ellin345, complete genome - 1..5650368 4777 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 56.85 0 33..1418 + 461 94967032 - Acid345_0001 - chromosomal replication initiator protein DnaA 2 54.84 -1 1811..2926 + 371 94967033 - Acid345_0002 - DNA polymerase III, beta subunit 3 61.97 +1 2996..3931 + 311 94967034 - Acid345_0003 - glucokinase 4 57.33 0 3928..4977 + 349 94967035 - Acid345_0004 - glutamine-fructose-6-phosphate transaminase (isomerizing) 5 57.03 0 4984..6249 + 421 94967036 - Acid345_0005 - major facilitator transporter 6 55.88 -1 6357..6773 + 138 94967037 - Acid345_0006 - large conductance mechanosensitive channel protein 7 57.64 0 7066..7464 - 132 94967038 - Acid345_0007 - hypothetical protein 8 57.46 0 8277..10916 + 879 94967039 - Acid345_0008 - DNA gyrase subunit B 9 58.26 0 11118..13151 + 677 94967040 - Acid345_0009 - endothelin-converting protein 1 10 59.36 0 13474..13911 + 145 94967041 - Acid345_0010 - hypothetical protein 11 57.35 0 14112..15593 + 493 94967042 - Acid345_0011 - hypothetical protein 12 58.49 0 15673..16821 + 382 94967043 - Acid345_0012 - hypothetical protein 13 60.11 0 16925..17656 + 243 94967044 - Acid345_0013 - hypothetical protein 14 61.59 +1 17749..18162 - 137 94967045 - Acid345_0014 - hypothetical protein 15 57.72 0 18300..18869 - 189 94967046 - Acid345_0015 - TetR family transcriptional regulator 16 60.40 0 18980..19936 + 318 94967047 - Acid345_0016 - methylase involved in ubiquinone/menaquinone biosynthesis-like 17 57.28 0 19887..20291 - 134 94967048 - Acid345_0017 - hypothetical protein 18 58.84 0 20559..20954 + 131 94967049 - Acid345_0018 - 50S ribosomal protein L21P 19 62.45 +1 20966..21226 + 86 94967050 rpmA Acid345_0019 - 50S ribosomal protein L27 20 61.02 0 21328..22425 + 365 94967051 obgE Acid345_0020 - GTPase ObgE 21 57.53 0 22422..23198 + 258 94967052 - Acid345_0021 - nicotinate-nucleotide adenylyltransferase 22 57.11 0 23235..23726 + 163 94967053 - Acid345_0022 - Iojap-related protein 23 61.67 +1 23738..24697 + 319 94967054 - Acid345_0023 - sigma-54 dependent trancsriptional regulator 24 57.37 0 24743..25183 + 146 94967055 - Acid345_0024 - hypothetical protein 25 59.44 0 25183..25749 + 188 94967056 - Acid345_0025 - hypothetical protein 26 57.07 0 25751..26500 - 249 94967057 - Acid345_0026 - short-chain dehydrogenase/reductase SDR 27 56.17 0 26594..26917 - 107 94967058 - Acid345_0027 - ArsR family transcriptional regulator 28 56.00 0 27088..27312 + 74 94967059 - Acid345_0028 - 50S ribosomal protein L31P 29 57.09 0 27354..27635 - 93 94967060 - Acid345_0029 - hypothetical protein 30 61.28 +1 27676..28788 + 370 94967061 - Acid345_0030 - dihydrouridine synthase TIM-barrel protein nifR3 31 59.15 0 28785..29210 - 141 94967062 - Acid345_0031 - hypothetical protein 32 58.00 0 29312..29611 + 99 94967063 - Acid345_0032 - hypothetical protein 33 58.37 0 29683..30369 + 228 94967064 - Acid345_0033 - HAD family hydrolase 34 56.67 0 30366..30665 - 99 94967065 - Acid345_0034 - type I antifreeze protein 35 59.14 0 30752..31615 + 287 94967066 - Acid345_0035 - hypothetical protein 36 57.17 0 31619..32092 - 157 94967067 - Acid345_0036 - L-asparaginase 37 59.48 0 32449..34701 + 750 94967068 - Acid345_0037 - serine/threonine protein kinase 38 56.29 0 34756..35844 - 362 94967069 - Acid345_0038 - TonB-like protein 39 56.13 0 35844..36707 - 287 94967070 - Acid345_0039 - beta-lactamase-like protein 40 58.75 0 36791..37687 - 298 94967071 - Acid345_0040 - chromosome segregation DNA-binding protein 41 56.33 0 37699..38520 - 273 94967072 - Acid345_0041 - chromosome segregation ATPase 42 58.48 0 38797..39456 - 219 94967073 - Acid345_0042 - methyltransferase GidB 43 58.88 0 39495..40175 + 226 94967074 - Acid345_0043 - hypothetical protein 44 54.17 -1 40290..40745 + 151 94967075 - Acid345_0044 - hypothetical protein 45 57.46 0 40785..41849 - 354 94967076 - Acid345_0045 - adenosine deaminase 46 58.23 0 41854..43299 - 481 94967077 - Acid345_0046 - amino acid permease-associated region 47 59.65 0 43956..46505 - 849 94967078 - Acid345_0047 - ATP-dependent DNA helicase Rep 48 57.87 0 46847..47653 - 268 94967079 - Acid345_0048 - hypothetical protein 49 60.00 0 47595..48029 - 144 94967080 - Acid345_0049 - hypothetical protein 50 58.95 0 48026..48958 - 310 94967081 - Acid345_0050 - polysaccharide deacetylase 51 62.24 +1 49043..50599 + 518 94967082 - Acid345_0051 - glutamyl-tRNA synthetase / glutamate--tRNA(Gln) ligase 52 57.76 0 50853..51200 - 115 94967083 - Acid345_0052 - hypothetical protein 53 56.67 0 51200..51559 - 119 94967084 - Acid345_0053 - hypothetical protein 54 57.06 0 51556..51909 - 117 94967085 - Acid345_0054 - hypothetical protein 55 58.75 0 51930..52826 - 298 94967086 - Acid345_0055 - hypothetical protein 56 59.00 0 52837..55080 - 747 94967087 - Acid345_0056 - peptidase S9B, dipeptidylpeptidase IV-like 57 60.95 0 55120..56361 - 413 94967088 - Acid345_0057 - UvrB/UvrC protein 58 57.45 0 56939..57220 - 93 94967089 - Acid345_0058 - hypothetical protein 59 49.82 -2 57238..58062 - 274 94967090 - Acid345_0059 - hypothetical protein 60 60.92 0 58072..58854 - 260 94967091 - Acid345_0060 - DNA replication protein, DNAC-like 61 61.05 0 59076..59360 + 94 94967092 - Acid345_0061 - hypothetical protein 62 60.93 0 59402..60796 + 464 94967093 - Acid345_0062 - tRNA(Ile)-lysidine synthetase-like 63 59.64 0 60793..61347 + 184 94967094 - Acid345_0063 - phosphoribosyltransferase 64 60.40 0 61544..63457 + 637 94967095 - Acid345_0064 - FtsH peptidase 65 57.27 0 64148..64924 + 258 94967096 - Acid345_0065 - Crp/FNR family transcriptional regulator 66 57.58 0 65299..66486 - 395 94967097 - Acid345_0066 - histidine kinase 67 56.66 0 66467..68065 - 532 94967098 - Acid345_0067 - putative circadian clock protein, KaiC 68 61.11 0 68435..68704 + 89 94967099 - Acid345_0068 - hypothetical protein 69 57.48 0 69030..70118 - 362 94967100 - Acid345_0069 - beta-lactamase-like 70 57.59 0 70249..71427 + 392 94967101 - Acid345_0070 - acyltransferase 3 71 60.30 0 71503..72429 + 308 94967102 - Acid345_0071 - hypothetical protein 72 62.92 +1 72508..75312 - 934 94967103 - Acid345_0072 - response regulator receiver protein 73 60.78 0 75499..76992 - 497 94967104 - Acid345_0073 - DNA uptake lipoprotein-like 74 58.96 0 77217..77891 - 224 94967105 - Acid345_0074 - ribulose-5-phosphate 3-epimerase 75 58.97 0 77989..78339 - 116 94967106 - Acid345_0075 - glyoxalase/bleomycin resistance protein/dioxygenase 76 61.76 +1 78524..78910 + 128 94967107 - Acid345_0076 - hypothetical protein 77 55.41 -1 79132..79584 + 150 94967108 - Acid345_0077 - TonB-like protein 78 61.23 0 79589..80269 - 226 94967109 - Acid345_0078 - TENA/THI-4 protein 79 53.23 -2 80450..81193 + 247 94967110 - Acid345_0079 - PEGA domain-containing protein 80 60.10 0 81260..83209 + 649 94967111 - Acid345_0080 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 81 57.98 0 83277..83771 + 164 94967112 - Acid345_0081 - DinB 82 60.27 0 83951..84247 - 98 94967113 - Acid345_0082 - histone-like DNA-binding protein 83 60.00 0 84580..85074 - 164 94967114 - Acid345_0083 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 84 57.85 0 85148..85873 + 241 94967115 - Acid345_0084 - response regulator receiver protein 85 59.95 0 85870..86748 - 292 94967116 lpxC Acid345_0085 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 86 60.57 0 87032..88573 + 513 94967117 - Acid345_0086 - hypothetical protein 87 59.52 0 88570..89073 - 167 94967118 - Acid345_0087 - hypothetical protein 88 61.16 0 89263..89898 - 211 94967119 - Acid345_0088 - ribonuclease H 89 50.19 -2 90498..90764 - 88 94967120 - Acid345_0089 - hypothetical protein 90 61.36 +1 90769..91560 - 263 94967121 - Acid345_0090 - metallophosphoesterase 91 62.58 +1 91563..92540 - 325 94967122 - Acid345_0091 - oligopeptide/dipeptide ABC transporter, ATPase subunit 92 58.04 0 93788..94216 - 142 94967123 - Acid345_0092 - hypothetical protein 93 58.76 0 94286..94981 - 231 94967124 - Acid345_0093 - ThiJ/PfpI 94 56.48 0 95369..96733 + 454 94967125 - Acid345_0094 - parallel beta-helix repeat-containing protein 95 56.41 0 96748..97254 - 168 94967126 - Acid345_0095 - hypothetical protein 96 62.14 +1 97525..98319 - 264 94967127 - Acid345_0096 - hypothetical protein 97 58.81 0 98433..98954 + 173 94967128 - Acid345_0097 - hypothetical protein 98 59.83 0 99032..102703 - 1223 94967129 - Acid345_0098 - protease-like 99 63.24 +1 103054..104016 + 320 94967130 - Acid345_0099 - selenophosphate synthase 100 59.52 0 104112..105413 + 433 94967131 - Acid345_0100 - hypothetical protein 58.57 MEAN 2.67 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.