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Acidobacteria bacterium Ellin345, complete genome - 1..5650368 4777 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3451 58.82 0 4075470..4076183 + 237 94970482 - Acid345_3455 - Crp/FNR family transcriptional regulator 3452 53.80 -1 4076696..4077208 + 170 94970483 - Acid345_3456 - hypothetical protein 3453 61.20 0 4077205..4078137 - 310 94970484 - Acid345_3457 - MarR family transcriptional regulator 3454 57.45 0 4078146..4078742 + 198 94970485 - Acid345_3458 - hypothetical protein 3455 59.94 0 4078739..4081192 - 817 94970486 - Acid345_3459 - ABC efflux pump, inner membrane subunit 3456 61.30 +1 4081315..4082580 - 421 94970487 - Acid345_3460 - major facilitator transporter 3457 60.54 0 4082675..4085434 - 919 94970488 - Acid345_3461 - ABC efflux pump, inner membrane subunit 3458 59.56 0 4085434..4085799 - 121 94970489 - Acid345_3462 - PadR family transcriptional regulator 3459 62.10 +1 4085936..4086307 + 123 94970490 - Acid345_3463 - ArsR family transcriptional regulator 3460 54.96 -1 4086309..4086701 + 130 94970491 - Acid345_3464 - glyoxalase/bleomycin resistance protein/dioxygenase 3461 62.01 +1 4086716..4087252 + 178 94970492 - Acid345_3465 - hypothetical protein 3462 53.73 -1 4087249..4087503 + 84 94970493 - Acid345_3466 - hypothetical protein 3463 56.72 0 4087481..4087882 + 133 94970494 - Acid345_3467 - hypothetical protein 3464 60.98 0 4088071..4090602 + 843 94970495 - Acid345_3468 - Hep_Hag 3465 62.30 +1 4090697..4093030 + 777 94970496 - Acid345_3469 - Hep_Hag 3466 58.16 0 4092990..4094318 - 442 94970497 - Acid345_3470 - putative thiol-disulfide isomerase or thioredoxin 3467 62.16 +1 4094536..4097217 - 893 94970498 - Acid345_3471 - ABC efflux pump, inner membrane subunit 3468 58.68 0 4097227..4097589 - 120 94970499 - Acid345_3472 - PadR family transcriptional regulator 3469 46.30 -2 4098355..4098570 + 71 94970500 - Acid345_3473 - hypothetical protein 3470 49.68 -2 4098590..4099525 - 311 94970501 - Acid345_3474 - Toll-interleukin receptor 3471 53.31 -1 4099543..4100463 - 306 94970502 - Acid345_3475 - hypothetical protein 3472 51.21 -2 4100531..4101559 - 342 94970503 - Acid345_3476 - HNH endonuclease 3473 55.73 -1 4101916..4102482 - 188 94970504 - Acid345_3477 - hypothetical protein 3474 54.07 -1 4102750..4103241 + 163 94970505 - Acid345_3478 - hypothetical protein 3475 59.58 0 4103590..4105197 - 535 94970506 - Acid345_3479 - ABC transporter, ATPase subunit 3476 62.14 +1 4105366..4106271 + 301 94970507 - Acid345_3480 - diguanylate cyclase with PAS/PAC sensor 3477 58.83 0 4106281..4107186 + 301 94970508 - Acid345_3481 - chemotaxis protein 3478 56.23 0 4107196..4107990 + 264 94970509 - Acid345_3482 - OmpA/MotB family outer membrane protein 3479 57.76 0 4108115..4109911 + 598 94970510 - Acid345_3483 - peptidase M28 3480 57.07 0 4109920..4111023 + 367 94970511 - Acid345_3484 - WD-40-like beta propeller repeat-containing protein 3481 58.83 0 4111024..4111929 - 301 94970512 - Acid345_3485 - type IV pilus assembly PilZ 3482 57.06 0 4112146..4112676 + 176 94970513 - Acid345_3486 - membrane protein 3483 59.45 0 4112673..4113434 - 253 94970514 - Acid345_3487 - LytR/AlgR family transcriptional regulator 3484 59.59 0 4113431..4114504 - 357 94970515 - Acid345_3488 - periplasmic sensor signal transduction histidine kinase 3485 59.57 0 4114510..4115214 - 234 94970516 - Acid345_3489 - putative transmembrane protein 3486 57.83 0 4115594..4117075 - 493 94970517 - Acid345_3490 - hypothetical protein 3487 55.89 -1 4117281..4118561 - 426 94970518 - Acid345_3491 - Pro-Hyp dipeptidase 3488 62.48 +1 4118638..4119831 - 397 94970519 - Acid345_3492 - Beta-ketoadipyl CoA thiolase 3489 57.65 0 4119937..4121988 + 683 94970520 - Acid345_3493 - Beta-N-acetylhexosaminidase 3490 56.74 0 4122055..4122336 + 93 94970521 - Acid345_3494 - hypothetical protein 3491 57.12 0 4122496..4123605 + 369 94970522 - Acid345_3495 - NAD-dependent epimerase/dehydratase 3492 56.24 0 4123602..4124915 + 437 94970523 - Acid345_3496 - radical SAM family Fe-S protein 3493 59.27 0 4124912..4126330 + 472 94970524 - Acid345_3497 - UDP-glucose 6-dehydrogenase 3494 58.12 0 4126561..4127145 + 194 94970525 - Acid345_3498 - transcription antitermination protein nusG 3495 58.54 0 4127145..4128338 + 397 94970526 - Acid345_3499 - glycosyl transferase, group 1 3496 59.67 0 4128348..4130819 - 823 94970527 - Acid345_3500 - ABC efflux pump, inner membrane subunit 3497 62.18 +1 4131033..4132103 - 356 94970528 - Acid345_3501 - 2-nitropropane dioxygenase, NPD 3498 59.39 0 4132464..4133150 + 228 94970529 - Acid345_3502 - two component LuxR family transcriptional regulator 3499 57.28 0 4133242..4136373 + 1043 94970530 - Acid345_3503 - multi-sensor signal transduction histidine kinase 3500 60.68 0 4136441..4136824 + 127 94970531 - Acid345_3504 - response regulator receiver protein 3501 60.06 0 4136828..4138825 + 665 94970532 - Acid345_3505 - response regulator receiver modulated diguanylate cyclase 3502 58.58 0 4138891..4142478 - 1195 94970533 - Acid345_3506 - Cna B-type protein 3503 59.03 0 4142760..4145222 - 820 94970534 kgd Acid345_3507 - alpha-ketoglutarate decarboxylase 3504 59.38 0 4145358..4146002 - 214 94970535 - Acid345_3508 - hypothetical protein 3505 58.07 0 4146130..4146897 + 255 94970536 - Acid345_3509 - short-chain dehydrogenase/reductase SDR 3506 56.16 0 4147029..4149341 + 770 94970537 - Acid345_3510 - hypothetical protein 3507 51.03 -2 4149473..4149715 - 80 94970538 - Acid345_3511 - hypothetical protein 3508 60.36 0 4149774..4150661 - 295 94970539 - Acid345_3512 - ECF subfamily RNA polymerase sigma-24 factor 3509 59.33 0 4150741..4151244 + 167 94970540 - Acid345_3513 - alkylhydroperoxidase AhpD 3510 57.78 0 4151296..4152780 - 494 94970541 - Acid345_3514 - PAS/PAC sensor signal transduction histidine kinase 3511 55.48 -1 4153491..4154795 + 434 94970542 - Acid345_3515 - hypothetical protein 3512 56.55 0 4154859..4156064 + 401 94970543 - Acid345_3516 - hypothetical protein 3513 51.92 -2 4158811..4159488 + 225 94970544 - Acid345_3517 - hypothetical protein 3514 58.88 0 4159600..4159920 - 106 94970545 - Acid345_3518 - hypothetical protein 3515 62.62 +1 4159954..4162917 - 987 94970546 - Acid345_3519 - multi-sensor signal transduction histidine kinase 3516 60.08 0 4163044..4165002 - 652 94970547 - Acid345_3520 - acetyl-coenzyme A synthetase 3517 60.49 0 4165115..4167025 - 636 94970548 - Acid345_3521 - AMP-dependent synthetase and ligase 3518 58.31 0 4167493..4168497 - 334 94970549 - Acid345_3522 - hypothetical protein 3519 58.42 0 4168825..4169952 + 375 94970550 - Acid345_3523 - glycoside hydrolase family protein 3520 58.01 0 4169949..4170329 - 126 94970551 - Acid345_3524 - response regulator receiver protein 3521 58.84 0 4170405..4173305 - 966 94970552 - Acid345_3525 - Cna B-type protein 3522 61.61 +1 4173401..4174627 - 408 94970553 - Acid345_3526 - hypothetical protein 3523 58.40 0 4174762..4175112 - 116 94970554 - Acid345_3527 - TPR repeat-containing protein 3524 55.98 0 4175192..4175425 + 77 94970555 - Acid345_3528 - hypothetical protein 3525 60.33 0 4175422..4176210 - 262 94970556 - Acid345_3529 - hypothetical protein 3526 59.52 0 4176382..4177290 - 302 94970557 - Acid345_3530 - hypothetical protein 3527 58.02 0 4177354..4178556 - 400 94970558 - Acid345_3531 - secretion protein HlyD 3528 60.53 0 4178806..4180173 + 455 94970559 - Acid345_3532 - hypothetical protein 3529 58.93 0 4180173..4181090 + 305 94970560 - Acid345_3533 - ABC peptide transporter, inner membrane subunit 3530 58.44 0 4181171..4181887 - 238 94970561 - Acid345_3534 - hypothetical protein 3531 58.36 0 4181981..4182955 - 324 94970562 - Acid345_3535 - GTP-binding protein Era 3532 58.31 0 4182955..4184223 - 422 94970563 - Acid345_3536 - CBS domain-containing protein 3533 56.43 0 4184220..4184678 - 152 94970564 - Acid345_3537 - hypothetical protein 3534 60.19 0 4184735..4185814 - 359 94970565 - Acid345_3538 - PhoH-like protein 3535 55.94 0 4186196..4186885 + 229 94970566 - Acid345_3539 - hypothetical protein 3536 51.47 -2 4187269..4187676 - 135 94970567 - Acid345_3540 - hypothetical protein 3537 61.50 +1 4187646..4189580 - 644 94970568 - Acid345_3541 - ATP-dependent DNA helicase RecQ 3538 52.27 -2 4189840..4190235 + 131 94970569 - Acid345_3542 - hypothetical protein 3539 62.56 +1 4190727..4192286 - 519 94970570 - Acid345_3543 - thiol oxidoreductase-like 3540 61.84 +1 4192723..4195560 + 945 94970571 - Acid345_3544 - lysine decarboxylase transcriptional regulator, CadC 3541 52.28 -2 4195579..4196433 - 284 94970572 - Acid345_3545 - hypothetical protein 3542 64.07 +2 4196497..4196766 + 89 94970573 - Acid345_3546 - SSU ribosomal protein S20P 3543 57.51 0 4196927..4198750 + 607 94970574 - Acid345_3547 - hypothetical protein 3544 54.81 -1 4199132..4199536 - 134 94970575 - Acid345_3548 - hypothetical protein 3545 59.06 0 4199590..4199970 - 126 94970576 - Acid345_3549 - hypothetical protein 3546 57.34 0 4200100..4200603 - 167 94970577 - Acid345_3550 - GCN5-related N-acetyltransferase 3547 62.82 +1 4200695..4201084 + 129 94970578 - Acid345_3551 - GCN5-related N-acetyltransferase 3548 60.03 0 4201108..4202523 + 471 94970579 - Acid345_3552 - hypothetical protein 3549 57.01 0 4202589..4204028 + 479 94970580 - Acid345_3553 - hypothetical protein 3550 58.46 0 4204075..4205475 - 466 94970581 - Acid345_3554 - hypothetical protein 58.57 MEAN 2.67 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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