version 1.0
Acidobacteria bacterium Ellin345, complete genome - 1..5650368 4777 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3415 62.22 +1 4038471..4038875 + 134 94970446 - Acid345_3419 - hypothetical protein 3416 60.37 0 4038875..4041526 + 883 94970447 - Acid345_3420 - hypothetical protein 3417 59.59 0 4041527..4042360 + 277 94970448 - Acid345_3421 - hypothetical protein 3418 61.06 0 4042360..4043037 + 225 94970449 - Acid345_3422 - hypothetical protein 3419 60.79 0 4043037..4045502 + 821 94970450 - Acid345_3423 - hypothetical protein 3420 59.60 0 4045634..4045930 - 98 94970451 - Acid345_3424 - XRE family plasmid maintenance system antidote protein 3421 49.69 -2 4045940..4046257 - 105 94970452 - Acid345_3425 - plasmid maintenance system killer 3422 61.60 +1 4046294..4048147 + 617 94970453 - Acid345_3426 - bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein 3423 53.68 -1 4048239..4048469 + 76 94970454 - Acid345_3427 - exodeoxyribonuclease VII small subunit 3424 58.59 0 4048791..4049471 + 226 94970455 - Acid345_3428 - DGPFAETKE domain-containing protein 3425 60.18 0 4049479..4050603 - 374 94970456 ligC Acid345_3429 - ATP-dependent DNA ligase 3426 60.19 0 4050665..4051744 + 359 94970457 - Acid345_3430 - oxidoreductase 3427 55.65 -1 4051768..4052130 - 120 94970458 - Acid345_3431 - ankyrin 3428 61.71 +1 4052142..4053089 + 315 94970459 - Acid345_3432 - farnesyl-diphosphate synthase 3429 61.24 +1 4053175..4053930 + 251 94970460 - Acid345_3433 - LmbE-like protein 3430 60.96 0 4054047..4054835 + 262 94970461 - Acid345_3434 - hypothetical protein 3431 59.80 0 4054835..4055227 + 130 94970462 - Acid345_3435 - glyoxalase/bleomycin resistance protein/dioxygenase 3432 56.87 0 4055224..4055856 - 210 94970463 - Acid345_3436 - O-methyltransferase family protein 3433 58.12 0 4055857..4056558 - 233 94970464 - Acid345_3437 - beta-lactamase-like 3434 56.18 0 4056569..4056940 - 123 94970465 - Acid345_3438 - rhodanese/sulfurtransferase-like protein 3435 59.83 0 4057118..4058872 + 584 94970466 - Acid345_3439 - serine phosphatase 3436 61.29 +1 4058869..4060152 + 427 94970467 - Acid345_3440 - diaminopimelate decarboxylase 3437 58.73 0 4060440..4061435 - 331 94970468 - Acid345_3441 - hypothetical protein 3438 59.68 0 4061439..4062326 - 295 94970469 - Acid345_3442 - protein of unknown function LppY and LpqO 3439 60.74 0 4062389..4064059 - 556 94970470 - Acid345_3443 - amidohydrolase 3 3440 58.24 0 4064360..4064905 + 181 94970471 - Acid345_3444 - BioY protein 3441 61.87 +1 4064944..4065819 + 291 94970472 - Acid345_3445 - hypothetical protein 3442 60.71 0 4065887..4066222 - 111 94970473 - Acid345_3446 - type IV pilus assembly PilZ 3443 58.49 0 4066231..4067955 - 574 94970474 - Acid345_3447 - Zn-dependent hydrolase 3444 60.00 0 4068106..4068660 + 184 94970475 - Acid345_3448 - ECF subfamily RNA polymerase sigma-24 factor 3445 63.19 +1 4068671..4069015 + 114 94970476 - Acid345_3449 - hypothetical protein 3446 60.52 0 4069072..4070292 - 406 94970477 - Acid345_3450 - penicillin-binding protein, transpeptidase 3447 63.53 +1 4070733..4072007 - 424 94970478 - Acid345_3451 - cell division protein FtsZ 3448 61.27 +1 4072068..4073309 - 413 94970479 - Acid345_3452 - cell division protein FtsA 3449 58.91 0 4073318..4074361 - 347 94970480 - Acid345_3453 - cell division septal protein-like 3450 60.92 0 4074545..4075240 - 231 94970481 - Acid345_3454 - hypothetical protein 3451 58.82 0 4075470..4076183 + 237 94970482 - Acid345_3455 - Crp/FNR family transcriptional regulator 3452 53.80 -1 4076696..4077208 + 170 94970483 - Acid345_3456 - hypothetical protein 3453 61.20 0 4077205..4078137 - 310 94970484 - Acid345_3457 - MarR family transcriptional regulator 3454 57.45 0 4078146..4078742 + 198 94970485 - Acid345_3458 - hypothetical protein 3455 59.94 0 4078739..4081192 - 817 94970486 - Acid345_3459 - ABC efflux pump, inner membrane subunit 3456 61.30 +1 4081315..4082580 - 421 94970487 - Acid345_3460 - major facilitator transporter 3457 60.54 0 4082675..4085434 - 919 94970488 - Acid345_3461 - ABC efflux pump, inner membrane subunit 3458 59.56 0 4085434..4085799 - 121 94970489 - Acid345_3462 - PadR family transcriptional regulator 3459 62.10 +1 4085936..4086307 + 123 94970490 - Acid345_3463 - ArsR family transcriptional regulator 3460 54.96 -1 4086309..4086701 + 130 94970491 - Acid345_3464 - glyoxalase/bleomycin resistance protein/dioxygenase 3461 62.01 +1 4086716..4087252 + 178 94970492 - Acid345_3465 - hypothetical protein 3462 53.73 -1 4087249..4087503 + 84 94970493 - Acid345_3466 - hypothetical protein 3463 56.72 0 4087481..4087882 + 133 94970494 - Acid345_3467 - hypothetical protein 3464 60.98 0 4088071..4090602 + 843 94970495 - Acid345_3468 - Hep_Hag 3465 62.30 +1 4090697..4093030 + 777 94970496 - Acid345_3469 - Hep_Hag 3466 58.16 0 4092990..4094318 - 442 94970497 - Acid345_3470 - putative thiol-disulfide isomerase or thioredoxin 3467 62.16 +1 4094536..4097217 - 893 94970498 - Acid345_3471 - ABC efflux pump, inner membrane subunit 3468 58.68 0 4097227..4097589 - 120 94970499 - Acid345_3472 - PadR family transcriptional regulator 3469 46.30 -2 4098355..4098570 + 71 94970500 - Acid345_3473 - hypothetical protein 3470 49.68 -2 4098590..4099525 - 311 94970501 - Acid345_3474 - Toll-interleukin receptor 3471 53.31 -1 4099543..4100463 - 306 94970502 - Acid345_3475 - hypothetical protein 3472 51.21 -2 4100531..4101559 - 342 94970503 - Acid345_3476 - HNH endonuclease 3473 55.73 -1 4101916..4102482 - 188 94970504 - Acid345_3477 - hypothetical protein 3474 54.07 -1 4102750..4103241 + 163 94970505 - Acid345_3478 - hypothetical protein 3475 59.58 0 4103590..4105197 - 535 94970506 - Acid345_3479 - ABC transporter, ATPase subunit 3476 62.14 +1 4105366..4106271 + 301 94970507 - Acid345_3480 - diguanylate cyclase with PAS/PAC sensor 3477 58.83 0 4106281..4107186 + 301 94970508 - Acid345_3481 - chemotaxis protein 3478 56.23 0 4107196..4107990 + 264 94970509 - Acid345_3482 - OmpA/MotB family outer membrane protein 3479 57.76 0 4108115..4109911 + 598 94970510 - Acid345_3483 - peptidase M28 3480 57.07 0 4109920..4111023 + 367 94970511 - Acid345_3484 - WD-40-like beta propeller repeat-containing protein 3481 58.83 0 4111024..4111929 - 301 94970512 - Acid345_3485 - type IV pilus assembly PilZ 3482 57.06 0 4112146..4112676 + 176 94970513 - Acid345_3486 - membrane protein 3483 59.45 0 4112673..4113434 - 253 94970514 - Acid345_3487 - LytR/AlgR family transcriptional regulator 3484 59.59 0 4113431..4114504 - 357 94970515 - Acid345_3488 - periplasmic sensor signal transduction histidine kinase 3485 59.57 0 4114510..4115214 - 234 94970516 - Acid345_3489 - putative transmembrane protein 3486 57.83 0 4115594..4117075 - 493 94970517 - Acid345_3490 - hypothetical protein 3487 55.89 -1 4117281..4118561 - 426 94970518 - Acid345_3491 - Pro-Hyp dipeptidase 3488 62.48 +1 4118638..4119831 - 397 94970519 - Acid345_3492 - Beta-ketoadipyl CoA thiolase 3489 57.65 0 4119937..4121988 + 683 94970520 - Acid345_3493 - Beta-N-acetylhexosaminidase 3490 56.74 0 4122055..4122336 + 93 94970521 - Acid345_3494 - hypothetical protein 3491 57.12 0 4122496..4123605 + 369 94970522 - Acid345_3495 - NAD-dependent epimerase/dehydratase 3492 56.24 0 4123602..4124915 + 437 94970523 - Acid345_3496 - radical SAM family Fe-S protein 3493 59.27 0 4124912..4126330 + 472 94970524 - Acid345_3497 - UDP-glucose 6-dehydrogenase 3494 58.12 0 4126561..4127145 + 194 94970525 - Acid345_3498 - transcription antitermination protein nusG 3495 58.54 0 4127145..4128338 + 397 94970526 - Acid345_3499 - glycosyl transferase, group 1 3496 59.67 0 4128348..4130819 - 823 94970527 - Acid345_3500 - ABC efflux pump, inner membrane subunit 3497 62.18 +1 4131033..4132103 - 356 94970528 - Acid345_3501 - 2-nitropropane dioxygenase, NPD 3498 59.39 0 4132464..4133150 + 228 94970529 - Acid345_3502 - two component LuxR family transcriptional regulator 3499 57.28 0 4133242..4136373 + 1043 94970530 - Acid345_3503 - multi-sensor signal transduction histidine kinase 3500 60.68 0 4136441..4136824 + 127 94970531 - Acid345_3504 - response regulator receiver protein 3501 60.06 0 4136828..4138825 + 665 94970532 - Acid345_3505 - response regulator receiver modulated diguanylate cyclase 3502 58.58 0 4138891..4142478 - 1195 94970533 - Acid345_3506 - Cna B-type protein 3503 59.03 0 4142760..4145222 - 820 94970534 kgd Acid345_3507 - alpha-ketoglutarate decarboxylase 3504 59.38 0 4145358..4146002 - 214 94970535 - Acid345_3508 - hypothetical protein 3505 58.07 0 4146130..4146897 + 255 94970536 - Acid345_3509 - short-chain dehydrogenase/reductase SDR 3506 56.16 0 4147029..4149341 + 770 94970537 - Acid345_3510 - hypothetical protein 3507 51.03 -2 4149473..4149715 - 80 94970538 - Acid345_3511 - hypothetical protein 3508 60.36 0 4149774..4150661 - 295 94970539 - Acid345_3512 - ECF subfamily RNA polymerase sigma-24 factor 3509 59.33 0 4150741..4151244 + 167 94970540 - Acid345_3513 - alkylhydroperoxidase AhpD 3510 57.78 0 4151296..4152780 - 494 94970541 - Acid345_3514 - PAS/PAC sensor signal transduction histidine kinase 3511 55.48 -1 4153491..4154795 + 434 94970542 - Acid345_3515 - hypothetical protein 3512 56.55 0 4154859..4156064 + 401 94970543 - Acid345_3516 - hypothetical protein 3513 51.92 -2 4158811..4159488 + 225 94970544 - Acid345_3517 - hypothetical protein 3514 58.88 0 4159600..4159920 - 106 94970545 - Acid345_3518 - hypothetical protein 58.57 MEAN 2.67 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.