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Acidobacteria bacterium Ellin345, complete genome - 1..5650368 4777 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3276 56.35 0 3885506..3886009 + 167 94970307 - Acid345_3280 - hypothetical protein 3277 57.70 0 3886011..3886445 - 144 94970308 - Acid345_3281 - hypothetical protein 3278 60.99 0 3886455..3888023 - 522 94970309 - Acid345_3282 - hypothetical protein 3279 59.86 0 3888020..3889018 - 332 94970310 - Acid345_3283 - TrkA-N 3280 56.61 0 3889124..3890635 - 503 94970311 - Acid345_3284 - amino acid transporter 3281 59.46 0 3890665..3892233 - 522 94970312 - Acid345_3285 - amino acid transporter 3282 60.22 0 3892347..3892982 - 211 94970313 - Acid345_3286 - thiamine-phosphate pyrophosphorylase 3283 59.96 0 3892983..3894338 - 451 94970314 - Acid345_3287 - acetyl-CoA carboxylase, biotin carboxylase 3284 57.98 0 3894366..3894860 - 164 94970315 - Acid345_3288 - biotin carboxyl carrier protein 3285 61.68 +1 3894928..3896031 - 367 94970316 - Acid345_3289 - peptidase M24 3286 60.70 0 3896141..3896995 - 284 94970317 - Acid345_3290 - hypothetical protein 3287 56.63 0 3897221..3897997 - 258 94970318 - Acid345_3291 - LytR/AlgR family transcriptional regulator 3288 56.98 0 3897924..3899090 - 388 94970319 - Acid345_3292 - periplasmic sensor signal transduction histidine kinase 3289 59.41 0 3899237..3900394 - 385 94970320 - Acid345_3293 - FAD dependent oxidoreductase 3290 55.60 -1 3900533..3902077 + 514 94970321 - Acid345_3294 - hypothetical protein 3291 58.67 0 3902079..3904166 - 695 94970322 - Acid345_3295 - glycogen debranching protein GlgX 3292 60.05 0 3904305..3904682 + 125 94970323 - Acid345_3296 - CopY family transcriptional regulator 3293 61.24 +1 3904679..3905950 + 423 94970324 - Acid345_3297 - peptidase M56, BlaR1 3294 61.26 +1 3905994..3907529 + 511 94970325 - Acid345_3298 - peptidase S1C, Do 3295 53.09 -2 3907968..3908615 - 215 94970326 - Acid345_3299 - sugar transferase 3296 58.73 0 3908619..3909803 - 394 94970327 - Acid345_3300 - DegT/DnrJ/EryC1/StrS aminotransferase 3297 56.05 0 3909881..3910558 - 225 94970328 - Acid345_3301 - methyltransferase type 11 3298 57.29 0 3910619..3911620 - 333 94970329 - Acid345_3302 - hypothetical protein 3299 62.05 +1 3911625..3912512 - 295 94970330 - Acid345_3303 - hypothetical protein 3300 56.72 0 3912535..3914334 - 599 94970331 - Acid345_3304 - hypothetical protein 3301 60.60 0 3914584..3915819 + 411 94970332 - Acid345_3305 - glycosyl transferase, group 1 3302 58.65 0 3915806..3916903 - 365 94970333 - Acid345_3306 - UDP-N-acetylglucosamine 2-epimerase 3303 59.46 0 3916928..3918106 - 392 94970334 - Acid345_3307 - glycosyl transferase, group 1 3304 53.61 -1 3918103..3919458 - 451 94970335 - Acid345_3308 - hypothetical protein 3305 57.10 0 3919461..3920996 - 511 94970336 - Acid345_3309 - O-antigen and teichoic acid export protein 3306 58.92 0 3921043..3923313 - 756 94970337 - Acid345_3310 - protein-tyrosine kinase 3307 59.49 0 3923338..3924312 - 324 94970338 - Acid345_3311 - polysaccharide export protein 3308 58.09 0 3924335..3926083 - 582 94970339 - Acid345_3312 - hypothetical protein 3309 59.30 0 3926085..3927197 - 370 94970340 - Acid345_3313 - DegT/DnrJ/EryC1/StrS aminotransferase 3310 58.08 0 3927207..3928277 - 356 94970341 - Acid345_3314 - FAD dependent oxidoreductase 3311 57.19 0 3928274..3928864 - 196 94970342 - Acid345_3315 - hexapaptide repeat-containing transferase 3312 60.45 0 3928872..3929933 - 353 94970343 - Acid345_3316 - oxidoreductase 3313 59.81 0 3930061..3932001 - 646 94970344 - Acid345_3317 - hypothetical protein 3314 60.49 0 3932017..3932988 - 323 94970345 - Acid345_3318 - transglutaminase-like 3315 56.42 0 3932992..3933957 - 321 94970346 - Acid345_3319 - hypothetical protein 3316 57.81 0 3933961..3935427 - 488 94970347 - Acid345_3320 - hypothetical protein 3317 60.58 0 3935514..3937205 - 563 94970348 - Acid345_3321 - hypothetical protein 3318 56.40 0 3937228..3938970 - 580 94970349 - Acid345_3322 - hypothetical protein 3319 58.48 0 3939379..3940758 + 459 94970350 - Acid345_3323 - secretion protein HlyD 3320 59.24 0 3940813..3941580 + 255 94970351 - Acid345_3324 - ABC transporter, ATPase subunit 3321 58.16 0 3942122..3942685 + 187 94970352 - Acid345_3325 - hypothetical protein 3322 61.38 +1 3942777..3945161 + 794 94970353 - Acid345_3326 - carbohydrate-binding family V/XII protein 3323 59.30 0 3945165..3946643 - 492 94970354 - Acid345_3327 - metallophosphoesterase 3324 56.97 0 3946837..3947589 - 250 94970355 - Acid345_3328 - haloacid dehalogenase-like hydrolase 3325 60.95 0 3947641..3948585 + 314 94970356 - Acid345_3329 - hypothetical protein 3326 62.01 +1 3948604..3949698 + 364 94970357 - Acid345_3330 - hypothetical protein 3327 58.65 0 3950213..3950761 - 182 94970358 - Acid345_3331 - hypothetical protein 3328 58.82 0 3950824..3951384 - 186 94970359 - Acid345_3332 - hypothetical protein 3329 60.71 0 3951418..3952860 - 480 94970360 - Acid345_3333 - amino acid transporter 3330 62.66 +1 3952847..3955639 - 930 94970361 - Acid345_3334 - hypothetical protein 3331 60.46 0 3955864..3957699 + 611 94970362 - Acid345_3335 - metal dependent phosphohydrolase 3332 60.85 0 3957769..3958731 + 320 94970363 - Acid345_3336 - signal recognition particle-docking protein FtsY 3333 63.08 +1 3958724..3959923 + 399 94970364 - Acid345_3337 - 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase 3334 59.69 0 3959911..3960426 - 171 94970365 - Acid345_3338 - hypothetical protein 3335 55.77 -1 3960510..3960968 - 152 94970366 - Acid345_3339 - hypothetical protein 3336 58.00 0 3961029..3963590 - 853 94970367 - Acid345_3340 - DNA topoisomerase 3337 59.24 0 3963700..3964857 - 385 94970368 - Acid345_3341 - DNA processing protein DprA, putative 3338 57.11 0 3964903..3965739 + 278 94970369 - Acid345_3342 - hypothetical protein 3339 57.05 0 3965821..3966465 + 214 94970370 - Acid345_3343 - membrane protein 3340 59.57 0 3966515..3967585 - 356 94970371 - Acid345_3344 - von Willebrand factor, type A 3341 59.48 0 3967692..3968693 - 333 94970372 - Acid345_3345 - ribosomal large subunit pseudouridine synthase D 3342 62.21 +1 3968713..3969273 - 186 94970373 - Acid345_3346 - membrane-bound metal-dependent hydrolase 3343 56.63 0 3969276..3969584 - 102 94970374 - Acid345_3347 - Rieske (2Fe-2S) oxidoreductase 3344 60.26 0 3969588..3970445 - 285 94970375 - Acid345_3348 - dimethyladenosine transferase 3345 58.76 0 3970597..3972051 + 484 94970376 - Acid345_3349 - glycogen/starch synthases, ADP-glucose type 3346 58.99 0 3972096..3974582 + 828 94970377 - Acid345_3350 - ABC efflux pump, inner membrane subunit 3347 60.22 0 3974905..3976362 - 485 94970378 - Acid345_3351 - amino acid transporter 3348 60.62 0 3976319..3977758 - 479 94970379 - Acid345_3352 - SSS family solute/sodium (Na+) symporter 3349 64.12 +2 3977919..3978821 + 300 94970380 - Acid345_3353 - ATPase, BadF/BadG/BcrA/BcrD type 3350 61.47 +1 3978865..3979518 + 217 94970381 - Acid345_3354 - phage SPO1 DNA polymerase-related protein 3351 57.62 0 3979519..3979938 + 139 94970382 - Acid345_3355 - hypothetical protein 3352 60.07 0 3979943..3981397 - 484 94970383 - Acid345_3356 - two component, sigma54 specific, Fis family transcriptional regulator 3353 59.59 0 3981390..3984302 - 970 94970384 - Acid345_3357 - multi-sensor signal transduction histidine kinase 3354 58.62 0 3984825..3985433 + 202 94970385 - Acid345_3358 - NADH-quinone oxidoreductase, B subunit 3355 60.54 0 3985513..3986328 + 271 94970386 - Acid345_3359 - hypothetical protein 3356 59.28 0 3986391..3987770 - 459 94970387 - Acid345_3360 - hypothetical protein 3357 59.12 0 3988303..3988713 + 136 94970388 - Acid345_3361 - hypothetical protein 3358 56.97 0 3988710..3989978 + 422 94970389 - Acid345_3362 - N-glycosyltransferase PgaC 3359 59.03 0 3989975..3991585 + 536 94970390 - Acid345_3363 - hypothetical protein 3360 58.43 0 3991675..3993531 + 618 94970391 - Acid345_3364 - multicopper oxidase, type 3 3361 61.89 +1 3993541..3994335 - 264 94970392 - Acid345_3365 - Alpha/beta hydrolase 3362 62.79 +1 3994439..3994825 - 128 94970393 - Acid345_3366 - hypothetical protein 3363 57.33 0 3994961..3995410 - 149 94970394 - Acid345_3367 - ferric uptake regulator family protein 3364 58.82 0 3995518..3997008 - 496 94970395 - Acid345_3368 - WD-40-like beta propeller repeat-containing protein 3365 60.82 0 3997048..3998415 - 455 94970396 - Acid345_3369 - serine/threonine protein kinase 3366 60.59 0 3998512..4000980 + 822 94970397 - Acid345_3370 - penicillin amidase 3367 57.84 0 4001038..4002204 - 388 94970398 - Acid345_3371 - hypothetical protein 3368 57.58 0 4002229..4002690 - 153 94970399 - Acid345_3372 - hypothetical protein 3369 56.44 0 4002662..4002925 - 87 94970400 - Acid345_3373 - hypothetical protein 3370 62.36 +1 4003128..4003661 - 177 94970401 - Acid345_3374 - hypothetical protein 3371 60.18 0 4004028..4004366 - 112 94970402 - Acid345_3375 - hypothetical protein 3372 57.35 0 4004405..4004812 - 135 94970403 - Acid345_3376 - hypothetical protein 3373 61.49 +1 4004809..4005639 - 276 94970404 - Acid345_3377 - chromosomal replication initiator, DnaA-like 3374 61.26 +1 4005636..4005857 - 73 94970405 - Acid345_3378 - hypothetical protein 3375 56.63 0 4006060..4006368 - 102 94970406 - Acid345_3379 - hypothetical protein 58.57 MEAN 2.67 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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