version 1.0
Acidobacteria bacterium Ellin345, complete genome - 1..5650368 4777 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3044 58.75 0 3619754..3620233 - 159 94970075 - Acid345_3048 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 3045 57.94 0 3620344..3622485 + 713 94970076 - Acid345_3049 - adenylate/guanylate cyclase 3046 56.88 0 3622548..3623354 + 268 94970077 - Acid345_3050 - hypothetical protein 3047 57.88 0 3623528..3626212 - 894 94970078 - Acid345_3051 - glycogen/starch/alpha-glucan phosphorylase 3048 60.28 0 3626277..3627356 - 359 94970079 - Acid345_3052 - TPR repeat-containing protein 3049 58.38 0 3627421..3630171 - 916 94970080 - Acid345_3053 - hypothetical protein 3050 60.40 0 3630218..3630823 - 201 94970081 - Acid345_3054 - uridine kinase 3051 60.14 0 3630820..3631662 - 280 94970082 - Acid345_3055 - purine nucleoside phosphorylase I, inosine and guanosine-specific 3052 57.84 0 3631655..3632911 - 418 94970083 - Acid345_3056 - Na+ dependent nucleoside transporter 3053 59.66 0 3632983..3633696 - 237 94970084 - Acid345_3057 - deoxyribose-phosphate aldolase 3054 54.53 -1 3633746..3634264 - 172 94970085 - Acid345_3058 - hypoxanthine phosphoribosyltransferase 3055 58.43 0 3634391..3635920 + 509 94970086 - Acid345_3059 - adenosine deaminase 3056 60.51 0 3635975..3636250 - 91 94970087 - Acid345_3060 - hypothetical protein 3057 58.99 0 3636401..3637090 - 229 94970088 - Acid345_3061 - two component transcriptional regulator 3058 59.68 0 3637087..3639075 - 662 94970089 - Acid345_3062 - periplasmic sensor signal transduction histidine kinase 3059 58.80 0 3639230..3640525 - 431 94970090 - Acid345_3063 - ABC multidrug efflux pump, inner membrane subunit 3060 59.39 0 3640522..3641469 - 315 94970091 - Acid345_3064 - ABC transporter, ATPase subunit 3061 59.91 0 3641583..3643298 + 571 94970092 - Acid345_3065 - electron-transferring-flavoprotein dehydrogenase 3062 58.25 0 3643348..3644820 - 490 94970093 - Acid345_3066 - amidohydrolase 3063 56.06 0 3645162..3645491 + 109 94970094 - Acid345_3067 - thioredoxin 3064 60.36 0 3645621..3647459 - 612 94970095 - Acid345_3068 - serine phosphatase 3065 59.42 0 3647573..3648814 + 413 94970096 - Acid345_3069 - tyrosyl-tRNA synthetase 3066 56.13 0 3648832..3649533 + 233 94970097 - Acid345_3070 - hypothetical protein 3067 61.47 +1 3649614..3651305 + 563 94970098 - Acid345_3071 - hypothetical protein 3068 56.78 0 3651448..3651801 + 117 94970099 - Acid345_3072 - DGPFAETKE domain-containing protein 3069 65.36 +2 3651839..3652756 - 305 94970100 - Acid345_3073 - zinc-binding alcohol dehydrogenase 3070 62.40 +1 3652985..3654016 + 343 94970101 - Acid345_3074 - transposase IS116/IS110/IS902 3071 55.23 -1 3654507..3655022 - 171 94970102 - Acid345_3075 - hypothetical protein 3072 62.60 +1 3655653..3656684 + 343 94970103 - Acid345_3076 - transposase IS116/IS110/IS902 3073 54.19 -1 3657014..3657478 - 154 94970104 - Acid345_3077 - hypothetical protein 3074 59.68 0 3657644..3659332 + 562 94970105 - Acid345_3078 - gamma-glutamyltransferase 2 3075 49.63 -2 3659462..3660271 - 269 94970106 - Acid345_3079 - hypothetical protein 3076 52.81 -2 3660264..3661172 - 302 94970107 - Acid345_3080 - ABC transporter, ATPase subunit 3077 56.30 0 3662535..3662939 - 134 94970108 - Acid345_3081 - OsmC-like protein 3078 60.04 0 3662955..3663467 - 170 94970109 - Acid345_3082 - ECF subfamily RNA polymerase sigma-24 factor 3079 59.93 0 3663499..3664047 - 182 94970110 - Acid345_3083 - rhodanese/sulfurtransferase-like protein 3080 62.98 +1 3664166..3665197 + 343 94970111 - Acid345_3084 - sphingosine kinase related enzyme 3081 61.09 0 3665323..3666219 + 298 94970112 - Acid345_3085 - TonB-like protein 3082 59.62 0 3666727..3667095 - 122 94970113 - Acid345_3086 - hypothetical protein 3083 58.47 0 3667183..3668121 - 312 94970114 - Acid345_3087 - PAS sensor signal transduction histidine kinase 3084 59.64 0 3668401..3671232 + 943 94970115 - Acid345_3088 - TPR repeat-containing serine/threonin protein kinase 3085 63.93 +2 3671531..3672115 - 194 94970116 - Acid345_3089 - TetR family transcriptional regulator 3086 62.61 +1 3672330..3673217 + 295 94970117 - Acid345_3090 - NAD-dependent epimerase/dehydratase 3087 58.75 0 3673221..3673460 + 79 94970118 - Acid345_3091 - hypothetical protein 3088 59.43 0 3673699..3674928 + 409 94970119 - Acid345_3092 - hypothetical protein 3089 59.13 0 3675039..3675701 + 220 94970120 - Acid345_3093 - type IV pilus assembly PilZ 3090 59.54 0 3676184..3677782 - 532 94970121 - Acid345_3094 - EmrB/QacA family drug resistance transporter 3091 61.56 +1 3677865..3679097 - 410 94970122 - Acid345_3095 - secretion protein HlyD 3092 59.44 0 3679100..3680593 - 497 94970123 - Acid345_3096 - outer membrane efflux protein 3093 60.37 0 3680939..3681907 + 322 94970124 - Acid345_3097 - NAD-dependent epimerase/dehydratase 3094 59.33 0 3682018..3683367 + 449 94970125 - Acid345_3098 - aminotransferase 3095 60.17 0 3683398..3684105 + 235 94970126 - Acid345_3099 - two component transcriptional regulator 3096 58.77 0 3684086..3685516 + 476 94970127 - Acid345_3100 - periplasmic sensor signal transduction histidine kinase 3097 58.72 0 3685513..3686343 + 276 94970128 - Acid345_3101 - hypothetical protein 3098 58.36 0 3686495..3687325 + 276 94970129 - Acid345_3102 - Alpha/beta hydrolase 3099 59.76 0 3687408..3687986 - 192 94970130 - Acid345_3103 - hypothetical protein 3100 64.17 +2 3687983..3689104 - 373 94970131 - Acid345_3104 - monooxygenase, FAD-binding 3101 60.57 0 3689109..3690158 - 349 94970132 - Acid345_3105 - chalcone and stilbene synthases-like 3102 61.18 0 3690399..3691436 - 345 94970133 - Acid345_3106 - ketol-acid reductoisomerase 3103 58.42 0 3691478..3692023 - 181 94970134 - Acid345_3107 - acetolactate synthase, small subunit 3104 61.31 +1 3692034..3693749 - 571 94970135 - Acid345_3108 - acetolactate synthase, large subunit, biosynthetic type 3105 62.83 +1 3693752..3695473 - 573 94970136 - Acid345_3109 - dihydroxy-acid dehydratase 3106 65.00 +2 3695932..3696954 + 340 94970137 - Acid345_3110 - 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 3107 64.94 +2 3697059..3697520 + 153 94970138 - Acid345_3111 - (2Fe-2S)-binding protein 3108 60.86 0 3697517..3699634 + 705 94970139 - Acid345_3112 - aldehyde oxidase and xanthine dehydrogenase molybdopterin binding 3109 59.89 0 3699743..3701026 + 427 94970140 - Acid345_3113 - FAD dependent oxidoreductase 3110 61.45 +1 3701019..3702359 - 446 94970141 - Acid345_3114 - amino acid transporter 3111 53.12 -2 3702441..3702809 - 122 94970142 - Acid345_3115 - hypothetical protein 3112 60.26 0 3702834..3705470 - 878 94970143 - Acid345_3116 - TPR repeat-containing serine/threonin protein kinase 3113 58.87 0 3705552..3707384 - 610 94970144 - Acid345_3117 - excinuclease ABC subunit C 3114 58.57 0 3707723..3708451 + 242 94970145 - Acid345_3118 - OmpA/MotB family outer membrane protein 3115 59.23 0 3708517..3709860 - 447 94970146 - Acid345_3119 - hypothetical protein 3116 59.84 0 3710045..3711436 - 463 94970147 - Acid345_3120 - hypothetical protein 3117 55.56 -1 3711568..3712188 - 206 94970148 - Acid345_3121 - hypothetical protein 3118 59.32 0 3712315..3715758 + 1147 94970149 - Acid345_3122 - glycosyl hydrolases 38-like 3119 62.70 +1 3715755..3716006 - 83 94970150 - Acid345_3123 - hypothetical protein 3120 56.97 0 3716120..3717016 + 298 94970151 - Acid345_3124 - LysR family transcriptional regulator 3121 60.29 0 3717053..3717538 + 161 94970152 - Acid345_3125 - hypothetical protein 3122 58.94 0 3717583..3719484 - 633 94970153 - Acid345_3126 - polysaccharide biosynthesis protein CapD 3123 54.07 -1 3719819..3720604 - 261 94970154 - Acid345_3127 - methyltransferase type 11 3124 59.83 0 3720879..3722327 + 482 94970155 - Acid345_3128 - hypothetical protein 3125 57.46 0 3722649..3722876 + 75 94970156 - Acid345_3129 - hypothetical protein 3126 57.24 0 3723115..3723729 + 204 94970157 - Acid345_3130 - hypothetical protein 3127 61.37 +1 3723768..3724805 + 345 94970158 - Acid345_3131 - phosphate transporter 3128 61.61 +1 3725288..3725821 + 177 94970159 - Acid345_3132 - ECF subfamily RNA polymerase sigma-24 factor 3129 65.69 +2 3725814..3726842 + 342 94970160 - Acid345_3133 - TonB-like protein 3130 59.84 0 3727291..3727803 - 170 94970161 - Acid345_3134 - hypothetical protein 3131 60.08 0 3727800..3729272 - 490 94970162 - Acid345_3135 - radical SAM family Fe-S protein 3132 64.85 +2 3729260..3730030 - 256 94970163 - Acid345_3136 - undecaprenyl pyrophosphate synthetase 3133 57.55 0 3730055..3730438 - 127 94970164 - Acid345_3137 - hypothetical protein 3134 62.11 +1 3730428..3731042 - 204 94970165 - Acid345_3138 - hypothetical protein 3135 60.40 0 3731257..3731910 - 217 94970166 - Acid345_3139 - carbonic anhydrase 3136 61.17 0 3732054..3733217 + 387 94970167 - Acid345_3140 - GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase 3137 59.98 0 3733333..3735351 - 672 94970168 - Acid345_3141 - physarolisin II 3138 57.14 0 3735740..3737167 + 475 94970169 - Acid345_3142 - L-glutamine synthetase 3139 60.17 0 3737213..3737566 - 117 94970170 - Acid345_3143 - type IV pilus assembly PilZ 3140 58.88 0 3737670..3739442 - 590 94970171 - Acid345_3144 - beta-lactamase 3141 57.11 0 3739507..3739914 + 135 94970172 - Acid345_3145 - hypothetical protein 3142 61.11 0 3739937..3740692 - 251 94970173 - Acid345_3146 - type IV pilus assembly PilZ 3143 56.10 0 3741166..3742509 - 447 94970174 - Acid345_3147 - hypothetical protein 58.57 MEAN 2.67 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.