version 1.0
Acidobacteria bacterium Ellin345, complete genome - 1..5650368 4777 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3011 57.64 0 3576999..3578051 - 350 94970042 - Acid345_3015 - 4Fe-4S ferredoxin, iron-sulfur binding 3012 57.02 0 3578137..3579525 - 462 94970043 - Acid345_3016 - amino acid transporter 3013 59.09 0 3579612..3580970 - 452 94970044 - Acid345_3017 - two component, sigma54 specific, Fis family transcriptional regulator 3014 57.23 0 3580991..3582559 - 522 94970045 - Acid345_3018 - PAS/PAC sensor hybrid histidine kinase 3015 57.43 0 3582695..3583441 - 248 94970046 - Acid345_3019 - type IV pilus assembly PilZ 3016 56.61 0 3583785..3584609 + 274 94970047 - Acid345_3020 - putative signal peptide protein 3017 58.48 0 3584684..3587809 + 1041 94970048 - Acid345_3021 - BNR repeat-containing glycosyl hydrolase 3018 54.81 -1 3587890..3588378 - 162 94970049 - Acid345_3022 - glyoxalase/bleomycin resistance protein/dioxygenase 3019 58.82 0 3588407..3588814 - 135 94970050 - Acid345_3023 - biotin/lipoyl attachment 3020 61.15 0 3588870..3589268 - 132 94970051 - Acid345_3024 - hypothetical protein 3021 61.73 +1 3589292..3590890 - 532 94970052 - Acid345_3025 - carboxyl transferase 3022 59.82 0 3590977..3592539 - 520 94970053 - Acid345_3026 - oxaloacetate decarboxylase 3023 60.81 0 3592684..3593520 - 278 94970054 - Acid345_3027 - glutamate--tRNA ligase 3024 63.57 +1 3593543..3593800 - 85 94970055 - Acid345_3028 - hypothetical protein 3025 57.34 0 3593858..3595765 - 635 94970056 - Acid345_3029 - small GTP-binding protein 3026 60.71 0 3595973..3596929 + 318 94970057 - Acid345_3030 - hypothetical protein 3027 59.36 0 3596922..3598085 - 387 94970058 - Acid345_3031 - putative aminotransferase 3028 60.99 0 3598206..3599174 - 322 94970059 - Acid345_3032 - 6-phosphofructokinase 3029 58.00 0 3599348..3600097 - 249 94970060 - Acid345_3033 - putative phophoslipid binding protein 3030 58.74 0 3600303..3601601 - 432 94970061 - Acid345_3034 - major facilitator transporter 3031 59.12 0 3601689..3603053 + 454 94970062 - Acid345_3035 - signal recognition particle subunit FFH/SRP54 (srp54) 3032 60.79 0 3603262..3604656 + 464 94970063 - Acid345_3036 - amino acid transporter 3033 56.76 0 3604640..3605497 - 285 94970064 - Acid345_3037 - hypothetical protein 3034 57.44 0 3605562..3607133 - 523 94970065 - Acid345_3038 - radical SAM family Fe-S protein 3035 59.60 0 3607205..3608647 + 480 94970066 - Acid345_3039 - hypothetical protein 3036 59.61 0 3608644..3610089 - 481 94970067 - Acid345_3040 - D-glutamate deacylase 3037 59.84 0 3610157..3612691 - 844 94970068 - Acid345_3041 - ABC efflux pump, inner membrane subunit 3038 61.07 0 3613225..3614367 - 380 94970069 - Acid345_3042 - Alpha/beta hydrolase 3039 59.80 0 3614517..3615623 + 368 94970070 - Acid345_3043 - acyltransferase 3 3040 59.29 0 3615673..3616689 + 338 94970071 - Acid345_3044 - alcohol dehydrogenase GroES-like protein 3041 59.87 0 3616752..3618134 - 460 94970072 - Acid345_3045 - cytochrome P450 3042 57.10 0 3618148..3618753 - 201 94970073 - Acid345_3046 - transcriptional regulator 3043 59.48 0 3618905..3619753 + 282 94970074 - Acid345_3047 - electron transport protein SCO1/SenC 3044 58.75 0 3619754..3620233 - 159 94970075 - Acid345_3048 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 3045 57.94 0 3620344..3622485 + 713 94970076 - Acid345_3049 - adenylate/guanylate cyclase 3046 56.88 0 3622548..3623354 + 268 94970077 - Acid345_3050 - hypothetical protein 3047 57.88 0 3623528..3626212 - 894 94970078 - Acid345_3051 - glycogen/starch/alpha-glucan phosphorylase 3048 60.28 0 3626277..3627356 - 359 94970079 - Acid345_3052 - TPR repeat-containing protein 3049 58.38 0 3627421..3630171 - 916 94970080 - Acid345_3053 - hypothetical protein 3050 60.40 0 3630218..3630823 - 201 94970081 - Acid345_3054 - uridine kinase 3051 60.14 0 3630820..3631662 - 280 94970082 - Acid345_3055 - purine nucleoside phosphorylase I, inosine and guanosine-specific 3052 57.84 0 3631655..3632911 - 418 94970083 - Acid345_3056 - Na+ dependent nucleoside transporter 3053 59.66 0 3632983..3633696 - 237 94970084 - Acid345_3057 - deoxyribose-phosphate aldolase 3054 54.53 -1 3633746..3634264 - 172 94970085 - Acid345_3058 - hypoxanthine phosphoribosyltransferase 3055 58.43 0 3634391..3635920 + 509 94970086 - Acid345_3059 - adenosine deaminase 3056 60.51 0 3635975..3636250 - 91 94970087 - Acid345_3060 - hypothetical protein 3057 58.99 0 3636401..3637090 - 229 94970088 - Acid345_3061 - two component transcriptional regulator 3058 59.68 0 3637087..3639075 - 662 94970089 - Acid345_3062 - periplasmic sensor signal transduction histidine kinase 3059 58.80 0 3639230..3640525 - 431 94970090 - Acid345_3063 - ABC multidrug efflux pump, inner membrane subunit 3060 59.39 0 3640522..3641469 - 315 94970091 - Acid345_3064 - ABC transporter, ATPase subunit 3061 59.91 0 3641583..3643298 + 571 94970092 - Acid345_3065 - electron-transferring-flavoprotein dehydrogenase 3062 58.25 0 3643348..3644820 - 490 94970093 - Acid345_3066 - amidohydrolase 3063 56.06 0 3645162..3645491 + 109 94970094 - Acid345_3067 - thioredoxin 3064 60.36 0 3645621..3647459 - 612 94970095 - Acid345_3068 - serine phosphatase 3065 59.42 0 3647573..3648814 + 413 94970096 - Acid345_3069 - tyrosyl-tRNA synthetase 3066 56.13 0 3648832..3649533 + 233 94970097 - Acid345_3070 - hypothetical protein 3067 61.47 +1 3649614..3651305 + 563 94970098 - Acid345_3071 - hypothetical protein 3068 56.78 0 3651448..3651801 + 117 94970099 - Acid345_3072 - DGPFAETKE domain-containing protein 3069 65.36 +2 3651839..3652756 - 305 94970100 - Acid345_3073 - zinc-binding alcohol dehydrogenase 3070 62.40 +1 3652985..3654016 + 343 94970101 - Acid345_3074 - transposase IS116/IS110/IS902 3071 55.23 -1 3654507..3655022 - 171 94970102 - Acid345_3075 - hypothetical protein 3072 62.60 +1 3655653..3656684 + 343 94970103 - Acid345_3076 - transposase IS116/IS110/IS902 3073 54.19 -1 3657014..3657478 - 154 94970104 - Acid345_3077 - hypothetical protein 3074 59.68 0 3657644..3659332 + 562 94970105 - Acid345_3078 - gamma-glutamyltransferase 2 3075 49.63 -2 3659462..3660271 - 269 94970106 - Acid345_3079 - hypothetical protein 3076 52.81 -2 3660264..3661172 - 302 94970107 - Acid345_3080 - ABC transporter, ATPase subunit 3077 56.30 0 3662535..3662939 - 134 94970108 - Acid345_3081 - OsmC-like protein 3078 60.04 0 3662955..3663467 - 170 94970109 - Acid345_3082 - ECF subfamily RNA polymerase sigma-24 factor 3079 59.93 0 3663499..3664047 - 182 94970110 - Acid345_3083 - rhodanese/sulfurtransferase-like protein 3080 62.98 +1 3664166..3665197 + 343 94970111 - Acid345_3084 - sphingosine kinase related enzyme 3081 61.09 0 3665323..3666219 + 298 94970112 - Acid345_3085 - TonB-like protein 3082 59.62 0 3666727..3667095 - 122 94970113 - Acid345_3086 - hypothetical protein 3083 58.47 0 3667183..3668121 - 312 94970114 - Acid345_3087 - PAS sensor signal transduction histidine kinase 3084 59.64 0 3668401..3671232 + 943 94970115 - Acid345_3088 - TPR repeat-containing serine/threonin protein kinase 3085 63.93 +2 3671531..3672115 - 194 94970116 - Acid345_3089 - TetR family transcriptional regulator 3086 62.61 +1 3672330..3673217 + 295 94970117 - Acid345_3090 - NAD-dependent epimerase/dehydratase 3087 58.75 0 3673221..3673460 + 79 94970118 - Acid345_3091 - hypothetical protein 3088 59.43 0 3673699..3674928 + 409 94970119 - Acid345_3092 - hypothetical protein 3089 59.13 0 3675039..3675701 + 220 94970120 - Acid345_3093 - type IV pilus assembly PilZ 3090 59.54 0 3676184..3677782 - 532 94970121 - Acid345_3094 - EmrB/QacA family drug resistance transporter 3091 61.56 +1 3677865..3679097 - 410 94970122 - Acid345_3095 - secretion protein HlyD 3092 59.44 0 3679100..3680593 - 497 94970123 - Acid345_3096 - outer membrane efflux protein 3093 60.37 0 3680939..3681907 + 322 94970124 - Acid345_3097 - NAD-dependent epimerase/dehydratase 3094 59.33 0 3682018..3683367 + 449 94970125 - Acid345_3098 - aminotransferase 3095 60.17 0 3683398..3684105 + 235 94970126 - Acid345_3099 - two component transcriptional regulator 3096 58.77 0 3684086..3685516 + 476 94970127 - Acid345_3100 - periplasmic sensor signal transduction histidine kinase 3097 58.72 0 3685513..3686343 + 276 94970128 - Acid345_3101 - hypothetical protein 3098 58.36 0 3686495..3687325 + 276 94970129 - Acid345_3102 - Alpha/beta hydrolase 3099 59.76 0 3687408..3687986 - 192 94970130 - Acid345_3103 - hypothetical protein 3100 64.17 +2 3687983..3689104 - 373 94970131 - Acid345_3104 - monooxygenase, FAD-binding 3101 60.57 0 3689109..3690158 - 349 94970132 - Acid345_3105 - chalcone and stilbene synthases-like 3102 61.18 0 3690399..3691436 - 345 94970133 - Acid345_3106 - ketol-acid reductoisomerase 3103 58.42 0 3691478..3692023 - 181 94970134 - Acid345_3107 - acetolactate synthase, small subunit 3104 61.31 +1 3692034..3693749 - 571 94970135 - Acid345_3108 - acetolactate synthase, large subunit, biosynthetic type 3105 62.83 +1 3693752..3695473 - 573 94970136 - Acid345_3109 - dihydroxy-acid dehydratase 3106 65.00 +2 3695932..3696954 + 340 94970137 - Acid345_3110 - 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 3107 64.94 +2 3697059..3697520 + 153 94970138 - Acid345_3111 - (2Fe-2S)-binding protein 3108 60.86 0 3697517..3699634 + 705 94970139 - Acid345_3112 - aldehyde oxidase and xanthine dehydrogenase molybdopterin binding 3109 59.89 0 3699743..3701026 + 427 94970140 - Acid345_3113 - FAD dependent oxidoreductase 3110 61.45 +1 3701019..3702359 - 446 94970141 - Acid345_3114 - amino acid transporter 58.57 MEAN 2.67 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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