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Acidobacteria bacterium Ellin345, complete genome - 1..5650368 4777 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2795 59.00 0 3314913..3315173 - 86 94969826 - Acid345_2799 - 4Fe-4S ferredoxin, iron-sulfur binding 2796 61.99 +1 3315275..3315787 - 170 94969827 - Acid345_2800 - hypothetical protein 2797 57.93 0 3315790..3316350 - 186 94969828 - Acid345_2801 - hypothetical protein 2798 60.26 0 3316383..3317303 - 306 94969829 - Acid345_2802 - hypothetical protein 2799 60.40 0 3317392..3318588 - 398 94969830 - Acid345_2803 - phosphoserine phosphatase SerB 2800 55.57 -1 3318764..3321781 + 1005 94969831 - Acid345_2804 - surface antigen (D15) 2801 57.41 0 3321818..3325771 + 1317 94969832 - Acid345_2805 - hypothetical protein 2802 55.93 0 3325918..3326532 + 204 94969833 - Acid345_2806 - flavodoxin/nitric oxide synthase 2803 58.16 0 3326581..3329025 + 814 94969834 - Acid345_2807 - glucan 1,4-alpha-glucosidase 2804 59.07 0 3329015..3331108 + 697 94969835 - Acid345_2808 - transketolase 2805 59.56 0 3331113..3331562 + 149 94969836 - Acid345_2809 - ribose-5-phosphate isomerase B 2806 59.92 0 3331566..3334442 + 958 94969837 - Acid345_2810 - bifunctional transaldolase/phosoglucose isomerase 2807 59.77 0 3334536..3335984 + 482 94969838 - Acid345_2811 - 6-phosphogluconate dehydrogenase (decarboxylating) 2808 61.04 0 3335997..3337541 + 514 94969839 - Acid345_2812 - glucose-6-phosphate 1-dehydrogenase 2809 59.38 0 3337543..3338379 + 278 94969840 - Acid345_2813 - Cof protein 2810 57.71 0 3338376..3339134 + 252 94969841 - Acid345_2814 - 6-phosphogluconolactonase 2811 56.70 0 3339273..3339794 + 173 94969842 - Acid345_2815 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 2812 58.31 0 3340513..3341673 + 386 94969843 - Acid345_2816 - NHL repeat-containing protein 2813 59.67 0 3341906..3345037 - 1043 94969844 - Acid345_2817 - hydrophobe/amphiphile efflux-1 HAE1 2814 62.07 +1 3345053..3346183 - 376 94969845 - Acid345_2818 - secretion protein HlyD 2815 60.55 0 3346492..3348765 + 757 94969846 - Acid345_2819 - glutamate carboxypeptidase II 2816 57.02 0 3348877..3350793 + 638 94969847 - Acid345_2820 - peptidase S15 2817 60.08 0 3350850..3351563 + 237 94969848 - Acid345_2821 - ABC transporter, ATPase subunit 2818 57.79 0 3351547..3352335 + 262 94969849 - Acid345_2822 - ABC transporter, inner membrane subunit 2819 60.40 0 3352354..3354492 + 712 94969850 - Acid345_2823 - glutamate carboxypeptidase II 2820 60.26 0 3354489..3355628 - 379 94969851 - Acid345_2824 - geranylgeranyl reductase 2821 58.96 0 3355638..3356597 - 319 94969852 - Acid345_2825 - putative esterase 2822 57.20 0 3356607..3357968 - 453 94969853 - Acid345_2826 - cell division protein FtsX 2823 60.51 0 3357965..3358711 - 248 94969854 - Acid345_2827 - ABC transporter, ATPase subunit 2824 58.54 0 3358776..3360632 - 618 94969855 - Acid345_2828 - ABC transporter, ATPase subunit 2825 59.45 0 3360937..3362238 + 433 94969856 - Acid345_2829 - secretion protein HlyD 2826 58.16 0 3362235..3365513 + 1092 94969857 - Acid345_2830 - acriflavin resistance protein 2827 57.86 0 3365517..3368615 + 1032 94969858 - Acid345_2831 - acriflavin resistance protein 2828 58.80 0 3368630..3370192 + 520 94969859 - Acid345_2832 - RND efflux system, outer membrane lipoprotein, NodT 2829 57.61 0 3370372..3371718 + 448 94969860 - Acid345_2833 - UDP-glucose/GDP-mannose dehydrogenase 2830 58.53 0 3372062..3372565 - 167 94969861 - Acid345_2834 - hypothetical protein 2831 58.52 0 3372630..3373586 - 318 94969862 - Acid345_2835 - hypothetical protein 2832 59.83 0 3373576..3374847 - 423 94969863 - Acid345_2836 - hypothetical protein 2833 58.30 0 3375117..3375893 + 258 94969864 - Acid345_2837 - nucleotidyl transferase 2834 57.44 0 3375890..3376864 + 324 94969865 - Acid345_2838 - NAD-dependent epimerase/dehydratase 2835 58.07 0 3376864..3378213 + 449 94969866 - Acid345_2839 - DegT/DnrJ/EryC1/StrS aminotransferase 2836 61.27 +1 3378216..3379253 + 345 94969867 - Acid345_2840 - NAD-dependent epimerase/dehydratase 2837 59.25 0 3379370..3380272 + 300 94969868 - Acid345_2841 - N-acetylneuraminate synthase 2838 58.75 0 3380269..3380748 + 159 94969869 - Acid345_2842 - phosphatase kdsC 2839 59.20 0 3380777..3382558 + 593 94969870 - Acid345_2843 - thiamine pyrophosphate enzyme-like TPP bindin 2840 56.23 0 3382600..3383538 + 312 94969871 - Acid345_2844 - methyltransferase FkbM 2841 61.44 +1 3383539..3384762 - 407 94969872 - Acid345_2845 - methyltransferase FkbM 2842 60.22 0 3384740..3385561 - 273 94969873 - Acid345_2846 - short-chain dehydrogenase/reductase SDR 2843 58.00 0 3385571..3386608 - 345 94969874 - Acid345_2847 - oxidoreductase 2844 59.25 0 3386605..3387453 - 282 94969875 - Acid345_2848 - xylose isomerase-like TIM barrel 2845 56.16 0 3387584..3388582 + 332 94969876 - Acid345_2849 - glycosyl transferase family protein 2846 58.92 0 3388579..3389598 + 339 94969877 - Acid345_2850 - hypothetical protein 2847 60.12 0 3389595..3391703 - 702 94969878 - Acid345_2851 - hypothetical protein 2848 61.65 +1 3391813..3392769 - 318 94969879 - Acid345_2852 - peptidase M48, Ste24p 2849 57.27 0 3392766..3393212 - 148 94969880 - Acid345_2853 - CopY family transcriptional regulator 2850 64.38 +2 3393342..3395132 + 596 94969881 - Acid345_2854 - amidase 2851 60.13 0 3395745..3398726 - 993 94969882 - Acid345_2855 - protein translocase subunit secA 2852 61.21 0 3398977..3399672 + 231 94969883 - Acid345_2856 - hypothetical protein 2853 57.07 0 3399716..3400309 - 197 94969884 - Acid345_2857 - hypothetical protein 2854 60.43 0 3400408..3403164 + 918 94969885 - Acid345_2858 - AMP-dependent synthetase and ligase 2855 57.80 0 3403167..3403865 - 232 94969886 - Acid345_2859 - response regulator receiver protein 2856 59.36 0 3403924..3404826 - 300 94969887 - Acid345_2860 - tyrosine recombinase XerC subunit 2857 59.98 0 3404823..3405764 - 313 94969888 - Acid345_2861 - tyrosine recombinase XerD subunit 2858 57.54 0 3405815..3406570 - 251 94969889 - Acid345_2862 - hypothetical protein 2859 58.17 0 3406567..3407625 - 352 94969890 - Acid345_2863 - DNA primase-like 2860 59.23 0 3407815..3408540 + 241 94969891 - Acid345_2864 - hypothetical protein 2861 60.73 0 3408561..3409268 + 235 94969892 - Acid345_2865 - metallophosphoesterase 2862 60.35 0 3409383..3410681 + 432 94969893 - Acid345_2866 - metal dependent phosphohydrolase 2863 60.41 0 3410763..3412760 + 665 94969894 - Acid345_2867 - hypothetical protein 2864 62.32 +1 3412766..3414007 + 413 94969895 - Acid345_2868 - hypothetical protein 2865 60.07 0 3414004..3414807 - 267 94969896 - Acid345_2869 - prolipoprotein diacylglyceryl transferase 2866 57.71 0 3415163..3416368 - 401 94969897 - Acid345_2870 - hypothetical protein 2867 59.22 0 3416505..3417377 - 290 94969898 - Acid345_2871 - hypothetical protein 2868 61.18 0 3417577..3417831 + 84 94969899 - Acid345_2872 - SSU ribosomal protein S16P 2869 58.82 0 3418005..3418259 + 84 94969900 - Acid345_2873 - RNA-binding protein 2870 56.35 0 3418237..3418866 + 209 94969901 - Acid345_2874 - 16S rRNA processing protein RimM 2871 60.75 0 3418863..3419657 + 264 94969902 - Acid345_2875 - tRNA (Guanine37-N1) methyltransferase 2872 55.46 -1 3419676..3420023 + 115 94969903 rplS Acid345_2876 - 50S ribosomal protein L19 2873 55.12 -1 3420085..3420699 - 204 94969904 - Acid345_2877 - hypothetical protein 2874 61.44 +1 3420785..3421549 + 254 94969905 - Acid345_2878 - RNase HII 2875 55.40 -1 3421546..3422193 - 215 94969906 - Acid345_2879 - hypothetical protein 2876 61.92 +1 3422335..3423072 + 245 94969907 - Acid345_2880 - LmbE-like protein 2877 58.07 0 3423823..3424869 - 348 94969908 - Acid345_2881 - hypothetical protein 2878 61.98 +1 3424909..3426102 - 397 94969909 - Acid345_2882 - putative signal transduction protein 2879 60.19 0 3426234..3426881 + 215 94969910 - Acid345_2883 - riboflavin synthase subunit alpha 2880 53.17 -2 3426927..3427178 + 83 94969911 - Acid345_2884 - transcriptional regulator 2881 50.63 -2 3427175..3427492 + 105 94969912 - Acid345_2885 - plasmid stabilization system protein 2882 58.94 0 3427501..3428328 - 275 94969913 - Acid345_2886 - ABC transporter, ATPase subunit 2883 60.03 0 3428325..3428972 - 215 94969914 - Acid345_2887 - molybdenum cofactor guanylyltransferase 2884 59.40 0 3429005..3430078 + 357 94969915 - Acid345_2888 - TrkA-N 2885 56.64 0 3430318..3430716 - 132 94969916 - Acid345_2889 - hypothetical protein 2886 59.46 0 3430952..3431728 + 258 94969917 - Acid345_2890 - hypothetical protein 2887 59.13 0 3431733..3432581 + 282 94969918 - Acid345_2891 - ABC transporter, ATPase subunit 2888 64.95 +2 3432847..3434535 + 562 94969919 - Acid345_2892 - hypothetical protein 2889 61.87 +1 3435352..3436623 + 423 94969920 - Acid345_2893 - DEAD/DEAH box helicase-like 2890 56.25 0 3436726..3437205 - 159 94969921 - Acid345_2894 - response regulator receiver protein 2891 57.55 0 3437196..3439313 - 705 94969922 - Acid345_2895 - multi-sensor signal transduction histidine kinase 2892 60.96 0 3440003..3442543 - 846 94969923 - Acid345_2896 - ABC efflux pump, inner membrane subunit 2893 60.53 0 3442540..3442881 - 113 94969924 - Acid345_2897 - PadR family transcriptional regulator 2894 57.05 0 3443133..3443600 - 155 94969925 - Acid345_2898 - DoxX 58.57 MEAN 2.67 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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