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Acidobacteria bacterium Ellin345, complete genome - 1..5650368 4777 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1993 56.95 0 2393808..2396102 + 764 94969024 - Acid345_1997 - type II and III secretion system protein 1994 56.74 0 2396198..2396620 + 140 94969025 - Acid345_1998 - general secretion pathway protein G 1995 55.05 -1 2396614..2397009 + 131 94969026 - Acid345_1999 - general secretion pathway protein G 1996 59.49 0 2397475..2398143 + 222 94969027 - Acid345_2000 - hypothetical protein 1997 56.91 0 2398155..2398718 + 187 94969028 - Acid345_2001 - hypothetical protein 1998 55.61 -1 2398731..2399924 + 397 94969029 - Acid345_2002 - hypothetical protein 1999 56.72 0 2399941..2402814 + 957 94969030 - Acid345_2003 - hypothetical protein 2000 55.52 -1 2402949..2404034 + 361 94969031 - Acid345_2004 - 4-hydroxyphenylpyruvate dioxygenase 2001 58.29 0 2404119..2405408 + 429 94969032 - Acid345_2005 - homogentisate 1,2-dioxygenase 2002 58.82 0 2405415..2406293 + 292 94969033 - Acid345_2006 - hypothetical protein 2003 59.84 0 2406299..2407588 + 429 94969034 - Acid345_2007 - fumarylacetoacetate hydrolase 2004 57.32 0 2407604..2409529 + 641 94969035 - Acid345_2008 - ABC transporter, ATPase subunit 2005 58.91 0 2409601..2409948 + 115 94969036 - Acid345_2009 - hypothetical protein 2006 55.06 -1 2409997..2410668 - 223 94969037 - Acid345_2010 - hypothetical protein 2007 55.96 0 2410766..2411344 - 192 94969038 - Acid345_2011 - NUDIX hydrolase 2008 60.00 0 2411380..2411964 - 194 94969039 - Acid345_2012 - hypothetical protein 2009 56.69 0 2412388..2412858 + 156 94969040 - Acid345_2013 - methionine sulfoxide reductase A 2010 52.05 -2 2412919..2413575 - 218 94969041 - Acid345_2014 - hypothetical protein 2011 56.05 0 2413693..2414361 - 222 94969042 - Acid345_2015 - hypothetical protein 2012 56.83 0 2414440..2415954 - 504 94969043 - Acid345_2016 - rhomboid-like protein 2013 57.29 0 2416363..2417364 + 333 94969044 - Acid345_2017 - 3-oxoacyl-[acyl-carrier-protein] synthase III 2014 56.33 0 2417412..2418098 - 228 94969045 - Acid345_2018 - hypothetical protein 2015 56.91 0 2418124..2418666 - 180 94969046 - Acid345_2019 - hypothetical protein 2016 53.19 -2 2418666..2419088 - 140 94969047 - Acid345_2020 - hypothetical protein 2017 59.02 0 2419085..2420365 - 426 94969048 - Acid345_2021 - TPR repeat-containing protein 2018 59.58 0 2420423..2423344 - 973 94969049 - Acid345_2022 - excinuclease ABC subunit A 2019 59.74 0 2423458..2424222 - 254 94969050 - Acid345_2023 - Heme/copper-type cytochrome/quinol oxidase subunit 3-like 2020 58.95 0 2424376..2425956 - 526 94969051 - Acid345_2024 - hypothetical protein 2021 58.94 0 2426000..2426905 - 301 94969052 - Acid345_2025 - Alpha/beta hydrolase 2022 55.77 -1 2426920..2427543 - 207 94969053 - Acid345_2026 - adenylate cyclase 2023 58.43 0 2427819..2428814 - 331 94969054 - Acid345_2027 - trans-hexaprenyltranstransferase 2024 52.93 -2 2428832..2429326 - 164 94969055 - Acid345_2028 - nucleotide-binding protein 2025 58.33 0 2429436..2430239 - 267 94969056 - Acid345_2029 - TatD-related deoxyribonuclease 2026 58.93 0 2430509..2432524 - 671 94969057 - Acid345_2030 - methionyl-tRNA synthetase 2027 61.05 0 2432517..2433905 - 462 94969058 - Acid345_2031 - hypothetical protein 2028 59.36 0 2434202..2436145 + 647 94969059 - Acid345_2032 - arginyl-tRNA synthetase 2029 60.09 0 2436264..2436476 + 70 94969060 - Acid345_2033 - hypothetical protein 2030 64.08 +2 2436605..2437723 + 372 94969061 - Acid345_2034 - hypothetical protein 2031 61.01 0 2437727..2438752 - 341 94969062 - Acid345_2035 - serine phosphatase 2032 60.81 0 2438975..2439760 - 261 94969063 - Acid345_2036 - hypothetical protein 2033 53.43 -1 2440196..2440792 - 198 94969064 - Acid345_2037 - hypothetical protein 2034 52.48 -2 2440767..2441513 - 248 94969065 - Acid345_2038 - XRE family transcriptional regulator 2035 63.09 +1 2441590..2443713 + 707 94969066 - Acid345_2039 - 5-oxoprolinase (ATP-hydrolyzing) 2036 61.02 0 2443875..2445611 - 578 94969067 - Acid345_2040 - peptidase M28 2037 52.89 -2 2445807..2446031 - 74 94969068 - Acid345_2041 - CsbD-like protein 2038 53.09 -2 2446117..2446278 - 53 94969069 - Acid345_2042 - hypothetical protein 2039 59.27 0 2446567..2447418 + 283 94969070 - Acid345_2043 - prephenate dehydratase 2040 59.69 0 2447592..2447978 + 128 94969071 - Acid345_2044 - hypothetical protein 2041 59.79 0 2448030..2448872 - 280 94969072 - Acid345_2045 - hypothetical protein 2042 62.73 +1 2449068..2449397 + 109 94969073 - Acid345_2046 - PadR family transcriptional regulator 2043 61.19 0 2449397..2452045 + 882 94969074 - Acid345_2047 - ABC efflux pump, inner membrane subunit 2044 56.86 0 2452113..2452469 - 118 94969075 - Acid345_2048 - hypothetical protein 2045 59.84 0 2452804..2455044 + 746 94969076 - Acid345_2049 - hypothetical protein 2046 58.19 0 2455123..2455476 - 117 94969077 - Acid345_2050 - hypothetical protein 2047 58.40 0 2455955..2458399 + 814 94969078 - Acid345_2051 - ATP-dependent protease La 2048 60.78 0 2458597..2459496 + 299 94969079 - Acid345_2052 - ABC sugar transporter, periplasmic ligand binding protein 2049 59.53 0 2459561..2462518 - 985 94969080 - Acid345_2053 - hypothetical protein 2050 60.63 0 2462638..2464758 - 706 94969081 - Acid345_2054 - putative site-specific recombinase transmembrane protein 2051 57.09 0 2464812..2466575 + 587 94969082 - Acid345_2055 - hypothetical protein 2052 58.56 0 2466684..2468015 + 443 94969083 - Acid345_2056 - peptidase M20D, amidohydrolase 2053 58.81 0 2468043..2468729 + 228 94969084 - Acid345_2057 - molybdopterin synthase subunit MoaD / molybdopterin synthase subunit MoaE 2054 57.43 0 2468730..2469779 + 349 94969085 - Acid345_2058 - von Willebrand factor, type A 2055 58.10 0 2470090..2470404 + 104 94969086 - Acid345_2059 - hypothetical protein 2056 57.36 0 2470404..2471252 + 282 94969087 - Acid345_2060 - inositol-1(or 4)-monophosphatase 2057 59.76 0 2471287..2471865 - 192 94969088 - Acid345_2061 - hypothetical protein 2058 54.09 -1 2472620..2473756 - 378 94969089 - Acid345_2062 - hypothetical protein 2059 52.25 -2 2473813..2474457 - 214 94969090 - Acid345_2063 - hypothetical protein 2060 51.34 -2 2474450..2475715 - 421 94969091 - Acid345_2064 - hypothetical protein 2061 59.62 0 2476086..2476553 - 155 94969092 - Acid345_2065 - hypothetical protein 2062 59.60 0 2476922..2477629 - 235 94969093 - Acid345_2066 - hypothetical protein 2063 59.66 0 2477964..2478719 - 251 94969094 - Acid345_2067 - hypothetical protein 2064 58.65 0 2478980..2479777 + 265 94969095 - Acid345_2068 - hypothetical protein 2065 60.46 0 2479770..2480849 + 359 94969096 - Acid345_2069 - phage integrase 2066 59.38 0 2481139..2482071 - 310 94969097 - Acid345_2070 - hypothetical protein 2067 59.74 0 2482142..2484031 + 629 94969098 - Acid345_2071 - TonB-dependent receptor 2068 58.97 0 2484085..2484954 - 289 94969099 - Acid345_2072 - putative outer membrane protein B, OmpB 2069 57.52 0 2485158..2486021 - 287 94969100 - Acid345_2073 - parallel beta-helix repeat-containing protein 2070 58.77 0 2486224..2487249 + 341 94969101 - Acid345_2074 - hypothetical protein 2071 58.16 0 2487259..2488140 + 293 94969102 - Acid345_2075 - hypothetical protein 2072 57.73 0 2488241..2488900 + 219 94969103 - Acid345_2076 - hypothetical protein 2073 54.11 -1 2488950..2489363 + 137 94969104 - Acid345_2077 - hypothetical protein 2074 60.47 0 2489367..2490383 - 338 94969105 - Acid345_2078 - sugar kinase 2075 60.52 0 2490823..2492952 - 709 94969106 - Acid345_2079 - hypothetical protein 2076 55.15 -1 2493250..2493909 + 219 94969107 - Acid345_2080 - TetR family transcriptional regulator 2077 57.71 0 2493912..2495708 + 598 94969108 - Acid345_2081 - AMP-dependent synthetase and ligase 2078 59.93 0 2496279..2497139 - 286 94969109 - Acid345_2082 - undecaprenyl-diphosphatase 2079 59.77 0 2497235..2498191 - 318 94969110 - Acid345_2083 - hypothetical protein 2080 59.36 0 2498220..2499218 - 332 94969111 - Acid345_2084 - pyridoxal-5'-phosphate-dependent enzyme, beta subunit 2081 61.67 +1 2499246..2500286 - 346 94969112 - Acid345_2085 - glycosyl transferase, group 1 2082 62.36 +1 2500289..2501077 - 262 94969113 - Acid345_2086 - LmbE-like protein 2083 61.05 0 2501147..2501983 + 278 94969114 dapD Acid345_2087 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 2084 59.53 0 2502135..2503451 + 438 94969115 - Acid345_2088 - sodium--dicarboxylate symporter 2085 53.80 -1 2503448..2503750 - 100 94969116 - Acid345_2089 - addiction module toxin, RelE/StbE 2086 60.61 0 2503754..2504050 - 98 94969117 - Acid345_2090 - RelB antitoxin 2087 59.58 0 2504116..2504919 - 267 94969118 - Acid345_2091 - hypothetical protein 2088 59.01 0 2504929..2506599 + 556 94969119 - Acid345_2092 - beta-lactamase-like 2089 52.93 -2 2506596..2506988 + 130 94969120 - Acid345_2093 - hypothetical protein 2090 57.91 0 2507005..2507541 + 178 94969121 - Acid345_2094 - hypothetical protein 2091 60.46 0 2507498..2508802 + 434 94969122 - Acid345_2095 - hypothetical protein 2092 60.39 0 2508996..2509967 + 323 94969123 - Acid345_2096 - cysteine synthase 58.57 MEAN 2.67 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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