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Acidobacteria bacterium Ellin345, complete genome - 1..5650368 4777 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1953 58.63 0 2351689..2352273 - 194 94968984 - Acid345_1957 - hypothetical protein 1954 53.51 -1 2352342..2352569 + 75 94968985 - Acid345_1958 - hypothetical protein 1955 58.02 0 2352714..2353349 + 211 94968986 - Acid345_1959 - hypothetical protein 1956 59.35 0 2353476..2354432 - 318 94968987 - Acid345_1960 - diguanylate cyclase with PAS/PAC sensor 1957 58.47 0 2354752..2355117 + 121 94968988 - Acid345_1961 - hypothetical protein 1958 59.13 0 2355119..2355556 - 145 94968989 - Acid345_1962 - type IV pilus assembly PilZ 1959 60.42 0 2355616..2357424 + 602 94968990 - Acid345_1963 - TPR repeat-containing protein 1960 59.36 0 2357421..2358419 + 332 94968991 - Acid345_1964 - hypothetical protein 1961 61.33 +1 2358465..2359550 - 361 94968992 - Acid345_1965 - hypothetical protein 1962 58.95 0 2359672..2359995 - 107 94968993 - Acid345_1966 - hypothetical protein 1963 59.25 0 2360271..2361833 + 520 94968994 - Acid345_1967 - 3-octaprenyl-4hydroxybenzoate decarboxylase 1964 55.33 -1 2361867..2362166 + 99 94968995 - Acid345_1968 - nucleotidyltransferase 1965 56.94 0 2362156..2362515 + 119 94968996 - Acid345_1969 - hypothetical protein 1966 56.18 0 2362649..2363020 + 123 94968997 - Acid345_1970 - response regulator receiver protein 1967 60.02 0 2363081..2363893 - 270 94968998 - Acid345_1971 - aldo/keto reductase 1968 60.54 0 2363948..2364844 + 298 94968999 - Acid345_1972 - hypothetical protein 1969 59.33 0 2364841..2365440 - 199 94969000 - Acid345_1973 - DNA replication and repair protein RecR 1970 60.13 0 2365450..2365755 - 101 94969001 - Acid345_1974 - hypothetical protein 1971 61.93 +1 2365758..2367656 - 632 94969002 - Acid345_1975 - DNA polymerase III, subunits gamma and tau 1972 60.23 0 2367766..2369163 + 465 94969003 - Acid345_1976 - methyltransferase type 12 1973 61.50 +1 2369160..2371712 + 850 94969004 - Acid345_1977 - metallophosphoesterase 1974 56.67 0 2371831..2372190 + 119 94969005 - Acid345_1978 - anti-sigma-factor antagonist 1975 58.03 0 2372289..2372705 + 138 94969006 - Acid345_1979 - deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) 1976 59.15 0 2372766..2373989 - 407 94969007 - Acid345_1980 - cystathionine beta-lyase 1977 59.02 0 2374609..2375811 + 400 94969008 - Acid345_1981 - cystathionine gamma-synthase 1978 58.29 0 2375798..2376967 + 389 94969009 - Acid345_1982 - cystathionine beta-lyase 1979 58.55 0 2377032..2377955 - 307 94969010 - Acid345_1983 - hypothetical protein 1980 58.92 0 2378030..2379424 - 464 94969011 - Acid345_1984 - YVTN beta-propeller repeat-containing protein 1981 56.33 0 2379409..2379795 - 128 94969012 - Acid345_1985 - hypothetical protein 1982 61.00 0 2380061..2380519 - 152 94969013 - Acid345_1986 - tRNA-adenosine deaminase 1983 60.71 0 2380524..2381345 - 273 94969014 - Acid345_1987 - hypothetical protein 1984 57.31 0 2381467..2382984 - 505 94969015 - Acid345_1988 - ABC peptide transporter, periplasmic ligand binding protein 1985 62.03 +1 2382977..2384119 - 380 94969016 anmK Acid345_1989 - anhydro-N-acetylmuramic acid kinase 1986 58.27 0 2384116..2385234 - 372 94969017 - Acid345_1990 - Beta-N-acetylhexosaminidase 1987 60.27 0 2385727..2387976 + 749 94969018 - Acid345_1991 - TonB-dependent receptor 1988 56.22 0 2388424..2388978 + 184 94969019 - Acid345_1992 - hypothetical protein 1989 59.77 0 2389076..2389858 - 260 94969020 - Acid345_1993 - exodeoxyribonuclease III (xth) 1990 53.93 -1 2389959..2390225 + 88 94969021 - Acid345_1994 - SSU ribosomal protein S15P 1991 60.29 0 2390402..2392849 + 815 94969022 - Acid345_1995 - polynucleotide phosphorylase/polyadenylase 1992 60.23 0 2393032..2393559 - 175 94969023 smpB Acid345_1996 - SsrA-binding protein 1993 56.95 0 2393808..2396102 + 764 94969024 - Acid345_1997 - type II and III secretion system protein 1994 56.74 0 2396198..2396620 + 140 94969025 - Acid345_1998 - general secretion pathway protein G 1995 55.05 -1 2396614..2397009 + 131 94969026 - Acid345_1999 - general secretion pathway protein G 1996 59.49 0 2397475..2398143 + 222 94969027 - Acid345_2000 - hypothetical protein 1997 56.91 0 2398155..2398718 + 187 94969028 - Acid345_2001 - hypothetical protein 1998 55.61 -1 2398731..2399924 + 397 94969029 - Acid345_2002 - hypothetical protein 1999 56.72 0 2399941..2402814 + 957 94969030 - Acid345_2003 - hypothetical protein 2000 55.52 -1 2402949..2404034 + 361 94969031 - Acid345_2004 - 4-hydroxyphenylpyruvate dioxygenase 2001 58.29 0 2404119..2405408 + 429 94969032 - Acid345_2005 - homogentisate 1,2-dioxygenase 2002 58.82 0 2405415..2406293 + 292 94969033 - Acid345_2006 - hypothetical protein 2003 59.84 0 2406299..2407588 + 429 94969034 - Acid345_2007 - fumarylacetoacetate hydrolase 2004 57.32 0 2407604..2409529 + 641 94969035 - Acid345_2008 - ABC transporter, ATPase subunit 2005 58.91 0 2409601..2409948 + 115 94969036 - Acid345_2009 - hypothetical protein 2006 55.06 -1 2409997..2410668 - 223 94969037 - Acid345_2010 - hypothetical protein 2007 55.96 0 2410766..2411344 - 192 94969038 - Acid345_2011 - NUDIX hydrolase 2008 60.00 0 2411380..2411964 - 194 94969039 - Acid345_2012 - hypothetical protein 2009 56.69 0 2412388..2412858 + 156 94969040 - Acid345_2013 - methionine sulfoxide reductase A 2010 52.05 -2 2412919..2413575 - 218 94969041 - Acid345_2014 - hypothetical protein 2011 56.05 0 2413693..2414361 - 222 94969042 - Acid345_2015 - hypothetical protein 2012 56.83 0 2414440..2415954 - 504 94969043 - Acid345_2016 - rhomboid-like protein 2013 57.29 0 2416363..2417364 + 333 94969044 - Acid345_2017 - 3-oxoacyl-[acyl-carrier-protein] synthase III 2014 56.33 0 2417412..2418098 - 228 94969045 - Acid345_2018 - hypothetical protein 2015 56.91 0 2418124..2418666 - 180 94969046 - Acid345_2019 - hypothetical protein 2016 53.19 -2 2418666..2419088 - 140 94969047 - Acid345_2020 - hypothetical protein 2017 59.02 0 2419085..2420365 - 426 94969048 - Acid345_2021 - TPR repeat-containing protein 2018 59.58 0 2420423..2423344 - 973 94969049 - Acid345_2022 - excinuclease ABC subunit A 2019 59.74 0 2423458..2424222 - 254 94969050 - Acid345_2023 - Heme/copper-type cytochrome/quinol oxidase subunit 3-like 2020 58.95 0 2424376..2425956 - 526 94969051 - Acid345_2024 - hypothetical protein 2021 58.94 0 2426000..2426905 - 301 94969052 - Acid345_2025 - Alpha/beta hydrolase 2022 55.77 -1 2426920..2427543 - 207 94969053 - Acid345_2026 - adenylate cyclase 2023 58.43 0 2427819..2428814 - 331 94969054 - Acid345_2027 - trans-hexaprenyltranstransferase 2024 52.93 -2 2428832..2429326 - 164 94969055 - Acid345_2028 - nucleotide-binding protein 2025 58.33 0 2429436..2430239 - 267 94969056 - Acid345_2029 - TatD-related deoxyribonuclease 2026 58.93 0 2430509..2432524 - 671 94969057 - Acid345_2030 - methionyl-tRNA synthetase 2027 61.05 0 2432517..2433905 - 462 94969058 - Acid345_2031 - hypothetical protein 2028 59.36 0 2434202..2436145 + 647 94969059 - Acid345_2032 - arginyl-tRNA synthetase 2029 60.09 0 2436264..2436476 + 70 94969060 - Acid345_2033 - hypothetical protein 2030 64.08 +2 2436605..2437723 + 372 94969061 - Acid345_2034 - hypothetical protein 2031 61.01 0 2437727..2438752 - 341 94969062 - Acid345_2035 - serine phosphatase 2032 60.81 0 2438975..2439760 - 261 94969063 - Acid345_2036 - hypothetical protein 2033 53.43 -1 2440196..2440792 - 198 94969064 - Acid345_2037 - hypothetical protein 2034 52.48 -2 2440767..2441513 - 248 94969065 - Acid345_2038 - XRE family transcriptional regulator 2035 63.09 +1 2441590..2443713 + 707 94969066 - Acid345_2039 - 5-oxoprolinase (ATP-hydrolyzing) 2036 61.02 0 2443875..2445611 - 578 94969067 - Acid345_2040 - peptidase M28 2037 52.89 -2 2445807..2446031 - 74 94969068 - Acid345_2041 - CsbD-like protein 2038 53.09 -2 2446117..2446278 - 53 94969069 - Acid345_2042 - hypothetical protein 2039 59.27 0 2446567..2447418 + 283 94969070 - Acid345_2043 - prephenate dehydratase 2040 59.69 0 2447592..2447978 + 128 94969071 - Acid345_2044 - hypothetical protein 2041 59.79 0 2448030..2448872 - 280 94969072 - Acid345_2045 - hypothetical protein 2042 62.73 +1 2449068..2449397 + 109 94969073 - Acid345_2046 - PadR family transcriptional regulator 2043 61.19 0 2449397..2452045 + 882 94969074 - Acid345_2047 - ABC efflux pump, inner membrane subunit 2044 56.86 0 2452113..2452469 - 118 94969075 - Acid345_2048 - hypothetical protein 2045 59.84 0 2452804..2455044 + 746 94969076 - Acid345_2049 - hypothetical protein 2046 58.19 0 2455123..2455476 - 117 94969077 - Acid345_2050 - hypothetical protein 2047 58.40 0 2455955..2458399 + 814 94969078 - Acid345_2051 - ATP-dependent protease La 2048 60.78 0 2458597..2459496 + 299 94969079 - Acid345_2052 - ABC sugar transporter, periplasmic ligand binding protein 2049 59.53 0 2459561..2462518 - 985 94969080 - Acid345_2053 - hypothetical protein 2050 60.63 0 2462638..2464758 - 706 94969081 - Acid345_2054 - putative site-specific recombinase transmembrane protein 2051 57.09 0 2464812..2466575 + 587 94969082 - Acid345_2055 - hypothetical protein 2052 58.56 0 2466684..2468015 + 443 94969083 - Acid345_2056 - peptidase M20D, amidohydrolase 58.57 MEAN 2.67 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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