version 1.0
Acidobacteria bacterium Ellin345, complete genome - 1..5650368 4777 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1683 58.73 0 2045043..2046125 - 360 94968714 - Acid345_1687 - LacI family transcription regulator 1684 56.61 0 2046502..2048937 + 811 94968715 - Acid345_1688 - hypothetical protein 1685 56.38 0 2048956..2050053 + 365 94968716 - Acid345_1689 - glycoside hydrolase family protein 1686 57.84 0 2050058..2051746 - 562 94968717 - Acid345_1690 - integrin-like protein 1687 55.50 -1 2051743..2052369 - 208 94968718 - Acid345_1691 - two component LuxR family transcriptional regulator 1688 58.41 0 2052366..2053697 - 443 94968719 - Acid345_1692 - periplasmic sensor signal transduction histidine kinase 1689 57.25 0 2053714..2054223 - 169 94968720 - Acid345_1693 - hypothetical protein 1690 57.46 0 2054349..2055260 + 303 94968721 - Acid345_1694 - glyoxalase/bleomycin resistance protein/dioxygenase 1691 55.71 -1 2055283..2056140 + 285 94968722 - Acid345_1695 - sugar phosphate isomerases/epimerases 1692 55.44 -1 2056358..2057248 + 296 94968723 - Acid345_1696 - sugar kinase 1693 57.87 0 2057264..2058775 + 503 94968724 - Acid345_1697 - sialate O-acetylesterase 1694 57.68 0 2058776..2060077 - 433 94968725 - Acid345_1698 - outer membrane efflux protein 1695 56.56 0 2060074..2063208 - 1044 94968726 - Acid345_1699 - acriflavin resistance protein 1696 59.81 0 2063208..2064461 - 417 94968727 - Acid345_1700 - secretion protein HlyD 1697 58.06 0 2065318..2066514 + 398 94968728 - Acid345_1701 - galactokinase 1698 59.04 0 2066511..2067506 + 331 94968729 - Acid345_1702 - UDP-galactose 4-epimerase 1699 58.64 0 2067503..2068549 + 348 94968730 - Acid345_1703 - galactose-1-phosphate uridylyltransferase 1700 60.59 0 2068555..2069607 - 350 94968731 - Acid345_1704 - hydrogenase expression/formation protein HypE 1701 60.66 0 2069604..2070719 - 371 94968732 - Acid345_1705 - hydrogenase expression/formation protein HypD 1702 58.23 0 2070716..2070964 - 82 94968733 - Acid345_1706 - hydrogenase assembly chaperone hypC/hupF 1703 59.79 0 2071408..2071785 + 125 94968734 - Acid345_1707 - PadR family transcriptional regulator 1704 61.23 0 2071788..2074454 + 888 94968735 - Acid345_1708 - ABC efflux pump, inner membrane subunit 1705 58.19 0 2074654..2075715 - 353 94968736 - Acid345_1709 - beta-lactamase-like 1706 63.16 +1 2075860..2077428 - 522 94968737 - Acid345_1710 - hypothetical protein 1707 59.68 0 2077840..2079084 + 414 94968738 - Acid345_1711 - hypothetical protein 1708 56.42 0 2079140..2080573 + 477 94968739 - Acid345_1712 - beta-lactamase 1709 57.21 0 2080828..2081049 + 73 94968740 - Acid345_1713 - hypothetical protein 1710 59.08 0 2081336..2082745 - 469 94968741 - Acid345_1714 - glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase 1711 57.94 0 2082915..2083796 - 293 94968742 - Acid345_1715 - hypothetical protein 1712 58.78 0 2084419..2085027 + 202 94968743 - Acid345_1716 - hypothetical protein 1713 55.86 -1 2085231..2085785 + 184 94968744 - Acid345_1717 - hypothetical protein 1714 59.24 0 2085882..2086568 + 228 94968745 - Acid345_1718 - TetR family transcriptional regulator 1715 60.86 0 2086610..2087557 + 315 94968746 - Acid345_1719 - secretion protein HlyD 1716 57.49 0 2087554..2088501 + 315 94968747 - Acid345_1720 - ABC transporter, ATPase subunit 1717 55.99 0 2088498..2089640 + 380 94968748 - Acid345_1721 - ABC multidrug efflux pump, inner membrane subunit 1718 60.74 0 2089650..2090915 + 421 94968749 - Acid345_1722 - ABC efflux system, outer membrane lipoprotein, NodT 1719 64.97 +2 2090968..2091144 + 58 94968750 - Acid345_1723 - hypothetical protein 1720 52.44 -2 2091211..2091723 - 170 94968751 - Acid345_1724 - hypothetical protein 1721 54.47 -1 2091865..2092725 - 286 94968752 - Acid345_1725 - OmpA/MotB family outer membrane protein 1722 57.13 0 2092821..2094047 - 408 94968753 - Acid345_1726 - hypothetical protein 1723 56.96 0 2094183..2094893 + 236 94968754 - Acid345_1727 - hypothetical protein 1724 59.97 0 2094993..2096753 - 586 94968755 - Acid345_1728 - L-lactate transporter 1725 60.84 0 2097037..2097654 + 205 94968756 - Acid345_1729 - ErfK/YbiS/YcfS/YnhG 1726 59.51 0 2097969..2099282 + 437 94968757 - Acid345_1730 - SPFH domain-containing protein/band 7 family protein 1727 59.35 0 2099364..2100689 + 441 94968758 - Acid345_1731 - hypothetical protein 1728 60.12 0 2100652..2101995 + 447 94968759 - Acid345_1732 - ABC peptide transporter, periplasmic ligand binding protein 1729 59.66 0 2101992..2103776 + 594 94968760 - Acid345_1733 - periplasmic sensor signal transduction histidine kinase 1730 59.31 0 2103773..2105158 + 461 94968761 - Acid345_1734 - two component, sigma54 specific, Fis family transcriptional regulator 1731 60.89 0 2105186..2106292 - 368 94968762 - Acid345_1735 - glycine oxidase ThiO 1732 60.21 0 2106348..2108561 + 737 94968763 - Acid345_1736 - TPR repeat-containing serine/threonin protein kinase 1733 58.23 0 2108706..2110127 + 473 94968764 - Acid345_1737 - peptidase C45, acyl-coenzyme A--6-aminopenicillanic acid acyl-transferase 1734 56.61 0 2110141..2110488 - 115 94968765 - Acid345_1738 - hypothetical protein 1735 58.46 0 2110629..2111603 + 324 94968766 - Acid345_1739 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1736 57.45 0 2111617..2113590 + 657 94968767 - Acid345_1740 - squalene cyclase 1737 59.07 0 2113594..2114580 + 328 94968768 - Acid345_1741 - NAD-dependent epimerase/dehydratase 1738 58.62 0 2114580..2115287 + 235 94968769 - Acid345_1742 - purine phosphorylases family protein 1 1739 56.53 0 2115301..2116425 + 374 94968770 - Acid345_1743 - alcohol dehydrogenase GroES-like protein 1740 57.13 0 2116434..2117471 + 345 94968771 - Acid345_1744 - zinc-binding alcohol dehydrogenase 1741 57.71 0 2117563..2118444 + 293 94968772 - Acid345_1745 - squalene/phytoene synthase 1742 59.31 0 2118441..2119391 + 316 94968773 - Acid345_1746 - farnesyl-diphosphate farnesyltransferase 1743 59.75 0 2119388..2120833 + 481 94968774 - Acid345_1747 - carotene 7,8-desaturase 1744 58.99 0 2120947..2122626 + 559 94968775 - Acid345_1748 - cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase 1745 60.25 0 2122686..2123480 + 264 94968776 - Acid345_1749 - UbiE/COQ5 methyltransferase 1746 57.55 0 2123473..2123790 - 105 94968777 - Acid345_1750 - CutA1 divalent ion tolerance protein 1747 59.40 0 2123905..2125308 + 467 94968778 - Acid345_1751 - phosphoglucomutase/phosphomannomutase alpha/beta/subunit 1748 58.20 0 2125312..2125677 + 121 94968779 - Acid345_1752 - cell division protein FtsB 1749 59.50 0 2125808..2126128 + 106 94968780 - Acid345_1753 - hypothetical protein 1750 58.65 0 2126138..2126773 + 211 94968781 - Acid345_1754 - lysine exporter protein LysE/YggA 1751 60.70 0 2126770..2127540 - 256 94968782 thiG Acid345_1755 - thiazole synthase 1752 59.35 0 2127619..2129463 - 614 94968783 - Acid345_1756 - hypothetical protein 1753 60.22 0 2129770..2132265 + 831 94968784 - Acid345_1757 - DNA translocase FtsK 1754 51.95 -2 2132397..2132729 + 110 94968785 - Acid345_1758 - DNA uptake protein and related DNA-binding proteins 1755 58.12 0 2132757..2134019 - 420 94968786 - Acid345_1759 - hypothetical protein 1756 60.00 0 2134235..2135434 + 399 94968787 - Acid345_1760 - serine/threonine protein kinase 1757 56.09 0 2135435..2136304 - 289 94968788 - Acid345_1761 - hypothetical protein 1758 56.90 0 2136333..2137223 - 296 94968789 - Acid345_1762 - hypothetical protein 1759 56.16 0 2137234..2138109 - 291 94968790 - Acid345_1763 - hypothetical protein 1760 58.45 0 2138110..2139873 - 587 94968791 - Acid345_1764 - membrane protein 1761 60.23 0 2140165..2140506 + 113 94968792 - Acid345_1765 - anti-sigma-factor antagonist 1762 60.59 0 2141067..2141543 - 158 94968793 - Acid345_1766 - hypothetical protein 1763 59.06 0 2141739..2143040 + 433 94968794 - Acid345_1767 - YVTN beta-propeller repeat-containing protein 1764 59.44 0 2143108..2143605 - 165 94968795 - Acid345_1768 - CheC-like protein 1765 62.72 +1 2143602..2144057 - 151 94968796 - Acid345_1769 - response regulator receiver protein, CheY 1766 59.16 0 2144120..2145211 - 363 94968797 - Acid345_1770 - response regulator receiver modulated CheB methylesterase 1767 60.03 0 2145208..2147391 - 727 94968798 - Acid345_1771 - CheA signal transduction histidine kinases 1768 55.44 -1 2147393..2148292 - 299 94968799 - Acid345_1772 - MCP methyltransferase, CheR-type 1769 57.00 0 2148466..2148951 - 161 94968800 - Acid345_1773 - CheW protein 1770 59.18 0 2148963..2150978 - 671 94968801 - Acid345_1774 - methyl-accepting chemotaxis sensory transducer 1771 57.18 0 2151033..2151401 - 122 94968802 - Acid345_1775 - TonB-like protein 1772 58.94 0 2151748..2155515 + 1255 94968803 - Acid345_1776 - signal transduction histidine kinase, nitrogen specific, NtrB 1773 58.72 0 2155512..2155901 + 129 94968804 - Acid345_1777 - response regulator receiver protein 1774 57.89 0 2155898..2157298 + 466 94968805 - Acid345_1778 - two component, sigma54 specific, Fis family transcriptional regulator 1775 55.75 -1 2157498..2157845 + 115 94968806 - Acid345_1779 - hypothetical protein 1776 59.74 0 2157842..2159386 + 514 94968807 - Acid345_1780 - hypothetical protein 1777 59.74 0 2159383..2160075 + 230 94968808 - Acid345_1781 - histidine kinase A-like 1778 58.22 0 2160215..2162203 - 662 94968809 - Acid345_1782 - excinuclease ABC subunit B 1779 54.47 -1 2162460..2163500 + 346 94968810 - Acid345_1783 - acyltransferase 3 1780 57.42 0 2163497..2164177 - 226 94968811 - Acid345_1784 - HAD family hydrolase 1781 62.31 +1 2164291..2165301 + 336 94968812 - Acid345_1785 - NAD-dependent epimerase/dehydratase 1782 60.52 0 2165433..2167643 + 736 94968813 - Acid345_1786 - dehydrogenase, E1 component 58.57 MEAN 2.67 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0